RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 ATG3Q9NT62 314 aa21.81■■□□□ 1.08
LINC01140-209ENST00000589455 RTCBQ9Y3I0 505 aaKnown RBP21.81■■□□□ 1.08
LINC01140-209ENST00000589455 PKD1L3Q7Z443 1732 aa21.8■■□□□ 1.08
LINC01140-209ENST00000589455 UBR3Q6ZT12 1888 aa21.8■■□□□ 1.08
LINC01140-209ENST00000589455 ADRA2BP18089 450 aa21.8■■□□□ 1.08
LINC01140-209ENST00000589455 RC3H1Q5TC82 1133 aaKnown RBP21.79■■□□□ 1.08
LINC01140-209ENST00000589455 CICQ96RK0 1608 aaPredicted RBP21.79■■□□□ 1.08
LINC01140-209ENST00000589455 PXDNLA1KZ92 1463 aa21.78■■□□□ 1.08
LINC01140-209ENST00000589455 ERVV-2B6SEH9 535 aa21.78■■□□□ 1.08
LINC01140-209ENST00000589455 BCS1LQ9Y276 419 aa21.78■■□□□ 1.08
LINC01140-209ENST00000589455 MAP2P11137 1827 aaKnown RBP21.77■■□□□ 1.08
LINC01140-209ENST00000589455 ITGB4P16144 1822 aa21.77■■□□□ 1.08
LINC01140-209ENST00000589455 DNAJC5GQ8N7S2 189 aa21.76■■□□□ 1.07
LINC01140-209ENST00000589455 CCDC87Q9NVE4 849 aa21.76■■□□□ 1.07
LINC01140-209ENST00000589455 POLKQ9UBT6 870 aa21.76■■□□□ 1.07
LINC01140-209ENST00000589455 A0A0G2JLW4 131 aa21.75■■□□□ 1.07
LINC01140-209ENST00000589455 HSP90AB1P08238 724 aaKnown RBP21.75■■□□□ 1.07
LINC01140-209ENST00000589455 KDRP35968 1356 aa21.74■■□□□ 1.07
LINC01140-209ENST00000589455 C10orf71Q711Q0 1435 aa21.74■■□□□ 1.07
LINC01140-209ENST00000589455 ARHGAP27Q6ZUM4 889 aa21.74■■□□□ 1.07
LINC01140-209ENST00000589455 ARHGEF1Q92888 912 aaKnown RBP21.74■■□□□ 1.07
LINC01140-209ENST00000589455 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
LINC01140-209ENST00000589455 CNTNAP4Q9C0A0 1308 aa21.74■■□□□ 1.07
LINC01140-209ENST00000589455 RPS6KA4O75676 772 aa21.73■■□□□ 1.07
LINC01140-209ENST00000589455 GYS1P13807 737 aa21.73■■□□□ 1.07
LINC01140-209ENST00000589455 KIF20BQ96Q89 1820 aa21.72■■□□□ 1.07
LINC01140-209ENST00000589455 DPEP1P16444 411 aa21.72■■□□□ 1.07
LINC01140-209ENST00000589455 RFC4P35249 363 aa21.72■■□□□ 1.07
LINC01140-209ENST00000589455 SLC4A9Q96Q91 983 aa21.72■■□□□ 1.07
LINC01140-209ENST00000589455 PARP3Q9Y6F1 533 aa21.72■■□□□ 1.07
LINC01140-209ENST00000589455 FCHSD2O94868 740 aa21.71■■□□□ 1.07
LINC01140-209ENST00000589455 EIF4A2Q14240 407 aaKnown RBP21.71■■□□□ 1.07
LINC01140-209ENST00000589455 RBM46Q8TBY0 533 aaKnown RBP21.71■■□□□ 1.07
LINC01140-209ENST00000589455 RBM42Q9BTD8 480 aaKnown RBP21.7■■□□□ 1.06
LINC01140-209ENST00000589455 NMRK2Q9NPI5 230 aa21.69■■□□□ 1.06
LINC01140-209ENST00000589455 KCNA3P22001 575 aa21.68■■□□□ 1.06
LINC01140-209ENST00000589455 PLEKHO1Q53GL0 409 aaPredicted RBP21.68■■□□□ 1.06
LINC01140-209ENST00000589455 PIM2Q9P1W9 311 aa21.68■■□□□ 1.06
LINC01140-209ENST00000589455 KIF13BQ9NQT8 1826 aa21.67■■□□□ 1.06
LINC01140-209ENST00000589455 ANKRD26Q9UPS8 1709 aa21.67■■□□□ 1.06
LINC01140-209ENST00000589455 FSTL1Q12841 308 aa21.67■■□□□ 1.06
LINC01140-209ENST00000589455 AMOTQ4VCS5 1084 aa21.67■■□□□ 1.06
LINC01140-209ENST00000589455 CABP4P57796 275 aa21.66■■□□□ 1.06
LINC01140-209ENST00000589455 C9orf131Q5VYM1 1079 aa21.66■■□□□ 1.06
LINC01140-209ENST00000589455 C16orf71Q8IYS4 520 aaPredicted RBP21.66■■□□□ 1.06
LINC01140-209ENST00000589455 ZNF831Q5JPB2 1677 aa21.65■■□□□ 1.06
LINC01140-209ENST00000589455 KDM2BQ8NHM5 1336 aa21.64■■□□□ 1.05
LINC01140-209ENST00000589455 DALRD3Q5D0E6 543 aaKnown RBP21.64■■□□□ 1.05
LINC01140-209ENST00000589455 TIMELESSQ9UNS1 1208 aa21.63■■□□□ 1.05
LINC01140-209ENST00000589455 KIAA1551Q9HCM1 1747 aa21.63■■□□□ 1.05
LINC01140-209ENST00000589455 JMYQ8N9B5 988 aa21.62■■□□□ 1.05
LINC01140-209ENST00000589455 KLRG1Q96E93 195 aa21.62■■□□□ 1.05
LINC01140-209ENST00000589455 C4AP0C0L4 1744 aa21.61■■□□□ 1.05
LINC01140-209ENST00000589455 MTHFSP49914 203 aa21.61■■□□□ 1.05
LINC01140-209ENST00000589455 ZNF530Q6P9A1 599 aaPredicted RBP21.61■■□□□ 1.05
LINC01140-209ENST00000589455 USP42Q9H9J4 1324 aaKnown RBP21.6■■□□□ 1.05
LINC01140-209ENST00000589455 TNNT2P45379 298 aaPredicted RBP21.6■■□□□ 1.05
LINC01140-209ENST00000589455 CRKLP46109 303 aaKnown RBP21.6■■□□□ 1.05
LINC01140-209ENST00000589455 KDM6AO15550 1401 aaPredicted RBP21.59■■□□□ 1.05
LINC01140-209ENST00000589455 PTCD1O75127 700 aaKnown RBP21.59■■□□□ 1.05
LINC01140-209ENST00000589455 FKBP8Q14318 412 aa21.59■■□□□ 1.05
LINC01140-209ENST00000589455 C1orf141Q5JVX7 400 aa21.59■■□□□ 1.05
LINC01140-209ENST00000589455 NFATC2IPQ8NCF5 419 aa21.58■■□□□ 1.05
LINC01140-209ENST00000589455 RNF181Q9P0P0 153 aa21.58■■□□□ 1.05
LINC01140-209ENST00000589455 ZC3H4Q9UPT8 1303 aaKnown RBP21.57■■□□□ 1.04
LINC01140-209ENST00000589455 N4BP2Q86UW6 1770 aaPredicted RBP21.57■■□□□ 1.04
LINC01140-209ENST00000589455 DDR1Q08345 913 aa21.57■■□□□ 1.04
LINC01140-209ENST00000589455 TM4SF1P30408 202 aa21.56■■□□□ 1.04
LINC01140-209ENST00000589455 SRP68Q9UHB9 627 aaKnown RBP21.56■■□□□ 1.04
LINC01140-209ENST00000589455 RRAGCQ9HB90 399 aa21.55■■□□□ 1.04
LINC01140-209ENST00000589455 POLRMTO00411 1230 aaKnown RBP21.54■■□□□ 1.04
LINC01140-209ENST00000589455 INTS5Q6P9B9 1019 aaKnown RBP21.54■■□□□ 1.04
LINC01140-209ENST00000589455 SMC1BQ8NDV3 1235 aa21.54■■□□□ 1.04
LINC01140-209ENST00000589455 COL5A3P25940 1745 aaPredicted RBP21.53■■□□□ 1.04
LINC01140-209ENST00000589455 ZPR1O75312 459 aa21.53■■□□□ 1.04
LINC01140-209ENST00000589455 CHRNA5P30532 468 aa21.53■■□□□ 1.04
LINC01140-209ENST00000589455 KCPQ6ZWJ8 1503 aa21.52■■□□□ 1.04
LINC01140-209ENST00000589455 HTRA3P83110 453 aa21.51■■□□□ 1.03
LINC01140-209ENST00000589455 BRCA1P38398 1863 aaKnown RBP21.51■■□□□ 1.03
LINC01140-209ENST00000589455 COL13A1Q5TAT6 717 aaPredicted RBP21.5■■□□□ 1.03
LINC01140-209ENST00000589455 AEBP1Q8IUX7 1158 aa21.5■■□□□ 1.03
LINC01140-209ENST00000589455 POLR3GLQ9BT43 218 aa21.5■■□□□ 1.03
LINC01140-209ENST00000589455 ARFGEF1Q9Y6D6 1849 aa21.5■■□□□ 1.03
LINC01140-209ENST00000589455 USPL1Q5W0Q7 1092 aa21.49■■□□□ 1.03
LINC01140-209ENST00000589455 SULT6B1Q6IMI4 303 aa21.49■■□□□ 1.03
LINC01140-209ENST00000589455 PANK3Q9H999 370 aa21.49■■□□□ 1.03
LINC01140-209ENST00000589455 WDR90Q96KV7 1748 aa21.49■■□□□ 1.03
LINC01140-209ENST00000589455 MYH14Q7Z406 1995 aaKnown RBP21.48■■□□□ 1.03
LINC01140-209ENST00000589455 LMNB1P20700 586 aa21.48■■□□□ 1.03
LINC01140-209ENST00000589455 AKAP4Q5JQC9 854 aa21.48■■□□□ 1.03
LINC01140-209ENST00000589455 MORC1Q86VD1 984 aa21.48■■□□□ 1.03
LINC01140-209ENST00000589455 NARFQ9UHQ1 456 aa21.48■■□□□ 1.03
LINC01140-209ENST00000589455 SOS1Q07889 1333 aaPredicted RBP21.48■■□□□ 1.03
LINC01140-209ENST00000589455 GLTPD2A6NH11 291 aa21.47■■□□□ 1.03
LINC01140-209ENST00000589455 VEGFAP15692 232 aaPredicted RBP21.47■■□□□ 1.03
LINC01140-209ENST00000589455 DNAJC10Q8IXB1 793 aa21.47■■□□□ 1.03
LINC01140-209ENST00000589455 SLC52A2Q9HAB3 445 aa21.47■■□□□ 1.03
LINC01140-209ENST00000589455 CYP19A1P11511 503 aaPredicted RBP21.45■■□□□ 1.02
LINC01140-209ENST00000589455 IL13P35225 146 aa21.45■■□□□ 1.02
LINC01140-209ENST00000589455 NFIXQ14938 502 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms