RNA–Protein interactions for RNA: ENST00000589248.5

ZNF235-203, Transcript of zinc finger protein 235, humanhuman

TSL 3 BASIC

Gene ZNF235, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-203ENST00000589248 KDRP35968 1356 aa17.55■□□□□ 0.4
ZNF235-203ENST00000589248 POLD1P28340 1107 aa17.55■□□□□ 0.4
ZNF235-203ENST00000589248 AMIGO3Q86WK7 504 aa17.55■□□□□ 0.4
ZNF235-203ENST00000589248 LINC00116Q8NCU8 138 aa17.55■□□□□ 0.4
ZNF235-203ENST00000589248 DCAF5Q96JK2 942 aa17.55■□□□□ 0.4
ZNF235-203ENST00000589248 KDM6AO15550 1401 aaPredicted RBP17.55■□□□□ 0.4
ZNF235-203ENST00000589248 TAF1LQ8IZX4 1826 aa17.54■□□□□ 0.4
ZNF235-203ENST00000589248 ERVV-2B6SEH9 535 aa17.54■□□□□ 0.4
ZNF235-203ENST00000589248 HSP90AB1P08238 724 aaKnown RBP17.54■□□□□ 0.4
ZNF235-203ENST00000589248 HMOX1P09601 288 aa17.54■□□□□ 0.4
ZNF235-203ENST00000589248 ITPK1Q13572 414 aa17.54■□□□□ 0.4
ZNF235-203ENST00000589248 MSL1Q68DK7 614 aa17.54■□□□□ 0.4
ZNF235-203ENST00000589248 C4BP0C0L5 1744 aa17.53■□□□□ 0.4
ZNF235-203ENST00000589248 ATP6V1AP38606 617 aa17.53■□□□□ 0.4
ZNF235-203ENST00000589248 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
ZNF235-203ENST00000589248 KLHL34Q8N239 644 aa17.53■□□□□ 0.4
ZNF235-203ENST00000589248 AK7Q96M32 723 aa17.53■□□□□ 0.4
ZNF235-203ENST00000589248 NPC1L1Q9UHC9 1359 aa17.53■□□□□ 0.4
ZNF235-203ENST00000589248 DIAPH1O60610 1272 aaKnown RBP17.52■□□□□ 0.4
ZNF235-203ENST00000589248 CABP4P57796 275 aa17.52■□□□□ 0.4
ZNF235-203ENST00000589248 PHF14O94880 888 aa17.51■□□□□ 0.39
ZNF235-203ENST00000589248 HMGB2P26583 209 aaKnown RBP17.51■□□□□ 0.39
ZNF235-203ENST00000589248 COL24A1Q17RW2 1714 aa17.5■□□□□ 0.39
ZNF235-203ENST00000589248 FLAD1Q8NFF5 587 aa17.5■□□□□ 0.39
ZNF235-203ENST00000589248 SLC4A9Q96Q91 983 aa17.5■□□□□ 0.39
ZNF235-203ENST00000589248 RBM42Q9BTD8 480 aaKnown RBP17.5■□□□□ 0.39
ZNF235-203ENST00000589248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
ZNF235-203ENST00000589248 NFATC2IPQ8NCF5 419 aa17.49■□□□□ 0.39
ZNF235-203ENST00000589248 MAP3K5Q99683 1374 aa17.49■□□□□ 0.39
ZNF235-203ENST00000589248 GOLGB1Q14789 3259 aaKnown RBP17.48■□□□□ 0.39
ZNF235-203ENST00000589248 YY1P25490 414 aa17.48■□□□□ 0.39
ZNF235-203ENST00000589248 GNPATO15228 680 aa17.47■□□□□ 0.39
ZNF235-203ENST00000589248 AKAP4Q5JQC9 854 aa17.47■□□□□ 0.39
ZNF235-203ENST00000589248 POTEHQ6S545 545 aa17.47■□□□□ 0.39
ZNF235-203ENST00000589248 LGR6Q9HBX8 967 aa17.47■□□□□ 0.39
ZNF235-203ENST00000589248 COL3A1P02461 1466 aaPredicted RBP17.47■□□□□ 0.39
ZNF235-203ENST00000589248 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.39
ZNF235-203ENST00000589248 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
ZNF235-203ENST00000589248 SSFA2P28290 1259 aa17.46■□□□□ 0.39
ZNF235-203ENST00000589248 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
ZNF235-203ENST00000589248 NLGN2Q8NFZ4 835 aa17.46■□□□□ 0.39
ZNF235-203ENST00000589248 PTCD1O75127 700 aaKnown RBP17.45■□□□□ 0.38
ZNF235-203ENST00000589248 RNMTO43148 476 aaKnown RBP17.43■□□□□ 0.38
ZNF235-203ENST00000589248 GPR162Q16538 588 aa17.42■□□□□ 0.38
ZNF235-203ENST00000589248 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
ZNF235-203ENST00000589248 SLC52A2Q9HAB3 445 aa17.42■□□□□ 0.38
ZNF235-203ENST00000589248 SCN11AQ9UI33 1791 aa17.42■□□□□ 0.38
ZNF235-203ENST00000589248 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
ZNF235-203ENST00000589248 RTCBQ9Y3I0 505 aaKnown RBP17.41■□□□□ 0.38
ZNF235-203ENST00000589248 SLC39A6Q13433 755 aa17.4■□□□□ 0.38
ZNF235-203ENST00000589248 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
ZNF235-203ENST00000589248 RC3H1Q5TC82 1133 aaKnown RBP17.4■□□□□ 0.38
ZNF235-203ENST00000589248 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
ZNF235-203ENST00000589248 ARHGEF1Q92888 912 aaKnown RBP17.39■□□□□ 0.37
ZNF235-203ENST00000589248 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
ZNF235-203ENST00000589248 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
ZNF235-203ENST00000589248 COL5A3P25940 1745 aaPredicted RBP17.38■□□□□ 0.37
ZNF235-203ENST00000589248 RPS6KA4O75676 772 aa17.37■□□□□ 0.37
ZNF235-203ENST00000589248 CRKLP46109 303 aaKnown RBP17.37■□□□□ 0.37
ZNF235-203ENST00000589248 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
ZNF235-203ENST00000589248 CD2APQ9Y5K6 639 aa17.37■□□□□ 0.37
ZNF235-203ENST00000589248 MRC1P22897 1456 aa17.37■□□□□ 0.37
ZNF235-203ENST00000589248 MYH14Q7Z406 1995 aaKnown RBP17.37■□□□□ 0.37
ZNF235-203ENST00000589248 YBX3P16989 372 aaKnown RBP eCLIP17.36■□□□□ 0.37
ZNF235-203ENST00000589248 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
ZNF235-203ENST00000589248 DNAJC10Q8IXB1 793 aa17.36■□□□□ 0.37
ZNF235-203ENST00000589248 RSPH6AQ9H0K4 717 aa17.36■□□□□ 0.37
ZNF235-203ENST00000589248 MMP10P09238 476 aa17.35■□□□□ 0.37
ZNF235-203ENST00000589248 RFC4P35249 363 aa17.35■□□□□ 0.37
ZNF235-203ENST00000589248 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
ZNF235-203ENST00000589248 GAS2L2Q8NHY3 880 aa17.35■□□□□ 0.37
ZNF235-203ENST00000589248 ADAMTS7Q9UKP4 1686 aa17.35■□□□□ 0.37
ZNF235-203ENST00000589248 TJP1Q07157 1748 aa17.35■□□□□ 0.37
ZNF235-203ENST00000589248 VIRMAQ69YN4 1812 aaKnown RBP17.35■□□□□ 0.37
ZNF235-203ENST00000589248 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
ZNF235-203ENST00000589248 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
ZNF235-203ENST00000589248 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
ZNF235-203ENST00000589248 INTS5Q6P9B9 1019 aaKnown RBP17.34■□□□□ 0.37
ZNF235-203ENST00000589248 NUDCQ9Y266 331 aa17.34■□□□□ 0.37
ZNF235-203ENST00000589248 SLC4A2P04920 1241 aa17.33■□□□□ 0.36
ZNF235-203ENST00000589248 GYS1P13807 737 aa17.33■□□□□ 0.36
ZNF235-203ENST00000589248 KCPQ6ZWJ8 1503 aa17.32■□□□□ 0.36
ZNF235-203ENST00000589248 NLGN1Q8N2Q7 840 aa17.32■□□□□ 0.36
ZNF235-203ENST00000589248 SRP68Q9UHB9 627 aaKnown RBP17.32■□□□□ 0.36
ZNF235-203ENST00000589248 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
ZNF235-203ENST00000589248 CYP19A1P11511 503 aaPredicted RBP17.31■□□□□ 0.36
ZNF235-203ENST00000589248 TEFQ10587 303 aa17.31■□□□□ 0.36
ZNF235-203ENST00000589248 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
ZNF235-203ENST00000589248 CICQ96RK0 1608 aaPredicted RBP17.3■□□□□ 0.36
ZNF235-203ENST00000589248 CHD4Q14839 1912 aa17.3■□□□□ 0.36
ZNF235-203ENST00000589248 ZNF784Q8NCA9 323 aaPredicted RBP17.3■□□□□ 0.36
ZNF235-203ENST00000589248 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
ZNF235-203ENST00000589248 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
ZNF235-203ENST00000589248 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
ZNF235-203ENST00000589248 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
ZNF235-203ENST00000589248 GRIN3BO60391 1043 aa17.28■□□□□ 0.36
ZNF235-203ENST00000589248 FCHSD2O94868 740 aa17.28■□□□□ 0.36
ZNF235-203ENST00000589248 FKBP8Q14318 412 aa17.28■□□□□ 0.36
ZNF235-203ENST00000589248 ZNF790Q6PG37 636 aa17.28■□□□□ 0.36
ZNF235-203ENST00000589248 VSIG10Q8N0Z9 540 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms