RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 SIK1P57059 783 aa21.69■■□□□ 1.06
TMEM259-206ENST00000589055 KLHL34Q8N239 644 aa21.69■■□□□ 1.06
TMEM259-206ENST00000589055 LINC00116Q8NCU8 138 aa21.69■■□□□ 1.06
TMEM259-206ENST00000589055 ATG3Q9NT62 314 aa21.69■■□□□ 1.06
TMEM259-206ENST00000589055 GOLGB1Q14789 3259 aaKnown RBP21.68■■□□□ 1.06
TMEM259-206ENST00000589055 HMOX1P09601 288 aa21.68■■□□□ 1.06
TMEM259-206ENST00000589055 ITPK1Q13572 414 aa21.68■■□□□ 1.06
TMEM259-206ENST00000589055 UBR3Q6ZT12 1888 aa21.68■■□□□ 1.06
TMEM259-206ENST00000589055 COL3A1P02461 1466 aaPredicted RBP21.67■■□□□ 1.06
TMEM259-206ENST00000589055 AMOTQ4VCS5 1084 aa21.67■■□□□ 1.06
TMEM259-206ENST00000589055 DCAF5Q96JK2 942 aa21.67■■□□□ 1.06
TMEM259-206ENST00000589055 AK7Q96M32 723 aa21.67■■□□□ 1.06
TMEM259-206ENST00000589055 NPC1L1Q9UHC9 1359 aa21.66■■□□□ 1.06
TMEM259-206ENST00000589055 PHF14O94880 888 aa21.66■■□□□ 1.06
TMEM259-206ENST00000589055 POLD1P28340 1107 aa21.66■■□□□ 1.06
TMEM259-206ENST00000589055 PELP1Q8IZL8 1130 aaKnown RBP21.66■■□□□ 1.06
TMEM259-206ENST00000589055 HSP90AB1P08238 724 aaKnown RBP21.65■■□□□ 1.06
TMEM259-206ENST00000589055 HSPA6P17066 643 aa21.65■■□□□ 1.06
TMEM259-206ENST00000589055 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
TMEM259-206ENST00000589055 ERVV-2B6SEH9 535 aa21.64■■□□□ 1.05
TMEM259-206ENST00000589055 ATP6V1AP38606 617 aa21.64■■□□□ 1.05
TMEM259-206ENST00000589055 C1orf141Q5JVX7 400 aa21.64■■□□□ 1.05
TMEM259-206ENST00000589055 DIAPH1O60610 1272 aaKnown RBP21.63■■□□□ 1.05
TMEM259-206ENST00000589055 CABP4P57796 275 aa21.63■■□□□ 1.05
TMEM259-206ENST00000589055 SCN11AQ9UI33 1791 aa21.62■■□□□ 1.05
TMEM259-206ENST00000589055 RBM42Q9BTD8 480 aaKnown RBP21.62■■□□□ 1.05
TMEM259-206ENST00000589055 ATP10DQ9P241 1426 aa21.62■■□□□ 1.05
TMEM259-206ENST00000589055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.61■■□□□ 1.05
TMEM259-206ENST00000589055 NLGN2Q8NFZ4 835 aa21.61■■□□□ 1.05
TMEM259-206ENST00000589055 GNPATO15228 680 aa21.6■■□□□ 1.05
TMEM259-206ENST00000589055 COL5A3P25940 1745 aaPredicted RBP21.6■■□□□ 1.05
TMEM259-206ENST00000589055 NFATC2IPQ8NCF5 419 aa21.59■■□□□ 1.05
TMEM259-206ENST00000589055 VIRMAQ69YN4 1812 aaKnown RBP21.58■■□□□ 1.05
TMEM259-206ENST00000589055 FLAD1Q8NFF5 587 aa21.58■■□□□ 1.05
TMEM259-206ENST00000589055 LGR6Q9HBX8 967 aa21.58■■□□□ 1.05
TMEM259-206ENST00000589055 U2SURPO15042 1029 aaKnown RBP21.57■■□□□ 1.04
TMEM259-206ENST00000589055 MTHFSDQ2M296 383 aaKnown RBP21.57■■□□□ 1.04
TMEM259-206ENST00000589055 AKAP4Q5JQC9 854 aa21.57■■□□□ 1.04
TMEM259-206ENST00000589055 ZNF831Q5JPB2 1677 aa21.56■■□□□ 1.04
TMEM259-206ENST00000589055 PTCD1O75127 700 aaKnown RBP21.56■■□□□ 1.04
TMEM259-206ENST00000589055 SSFA2P28290 1259 aa21.56■■□□□ 1.04
TMEM259-206ENST00000589055 GPBP1L1Q9HC44 474 aaPredicted RBP21.56■■□□□ 1.04
TMEM259-206ENST00000589055 TJP1Q07157 1748 aa21.55■■□□□ 1.04
TMEM259-206ENST00000589055 MRC1P22897 1456 aa21.54■■□□□ 1.04
TMEM259-206ENST00000589055 GRIN3BO60391 1043 aa21.54■■□□□ 1.04
TMEM259-206ENST00000589055 HMGB2P26583 209 aaKnown RBP21.54■■□□□ 1.04
TMEM259-206ENST00000589055 RNMTO43148 476 aaKnown RBP21.53■■□□□ 1.04
TMEM259-206ENST00000589055 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
TMEM259-206ENST00000589055 MYH14Q7Z406 1995 aaKnown RBP21.53■■□□□ 1.04
TMEM259-206ENST00000589055 ADAMTS7Q9UKP4 1686 aa21.53■■□□□ 1.04
TMEM259-206ENST00000589055 PPP2R1AP30153 589 aa21.51■■□□□ 1.03
TMEM259-206ENST00000589055 SLC39A6Q13433 755 aa21.51■■□□□ 1.03
TMEM259-206ENST00000589055 CNTNAP4Q9C0A0 1308 aa21.51■■□□□ 1.03
TMEM259-206ENST00000589055 C4AP0C0L4 1744 aa21.5■■□□□ 1.03
TMEM259-206ENST00000589055 CICQ96RK0 1608 aaPredicted RBP21.49■■□□□ 1.03
TMEM259-206ENST00000589055 YBX3P16989 372 aaKnown RBP eCLIP21.49■■□□□ 1.03
TMEM259-206ENST00000589055 RTCBQ9Y3I0 505 aaKnown RBP21.49■■□□□ 1.03
TMEM259-206ENST00000589055 CRKLP46109 303 aaKnown RBP21.48■■□□□ 1.03
TMEM259-206ENST00000589055 KCPQ6ZWJ8 1503 aa21.48■■□□□ 1.03
TMEM259-206ENST00000589055 ADCY9O60503 1353 aa21.48■■□□□ 1.03
TMEM259-206ENST00000589055 TRAPPC3LQ5T215 181 aa21.47■■□□□ 1.03
TMEM259-206ENST00000589055 RC3H1Q5TC82 1133 aaKnown RBP21.47■■□□□ 1.03
TMEM259-206ENST00000589055 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
TMEM259-206ENST00000589055 CFAP53Q96M91 514 aa21.47■■□□□ 1.03
TMEM259-206ENST00000589055 RPS6KA4O75676 772 aa21.46■■□□□ 1.03
TMEM259-206ENST00000589055 PRKAR2BP31323 418 aa21.46■■□□□ 1.03
TMEM259-206ENST00000589055 DNAJC10Q8IXB1 793 aa21.46■■□□□ 1.03
TMEM259-206ENST00000589055 PHACTR3Q96KR7 559 aa21.46■■□□□ 1.03
TMEM259-206ENST00000589055 RSPH6AQ9H0K4 717 aa21.46■■□□□ 1.03
TMEM259-206ENST00000589055 WWC3Q9ULE0 1092 aa21.45■■□□□ 1.02
TMEM259-206ENST00000589055 MMP10P09238 476 aa21.44■■□□□ 1.02
TMEM259-206ENST00000589055 ZNF526Q8TF50 670 aaPredicted RBP21.44■■□□□ 1.02
TMEM259-206ENST00000589055 CD2APQ9Y5K6 639 aa21.44■■□□□ 1.02
TMEM259-206ENST00000589055 IL17REQ8NFR9 667 aa21.43■■□□□ 1.02
TMEM259-206ENST00000589055 SRP68Q9UHB9 627 aaKnown RBP21.43■■□□□ 1.02
TMEM259-206ENST00000589055 UBR2Q8IWV8 1755 aa21.43■■□□□ 1.02
TMEM259-206ENST00000589055 SIPA1L3O60292 1781 aaPredicted RBP21.42■■□□□ 1.02
TMEM259-206ENST00000589055 U2AF1L5P0DN76 240 aaPredicted RBP21.42■■□□□ 1.02
TMEM259-206ENST00000589055 ADRA2BP18089 450 aa21.42■■□□□ 1.02
TMEM259-206ENST00000589055 APLP1P51693 650 aa21.42■■□□□ 1.02
TMEM259-206ENST00000589055 U2AF1Q01081 240 aaKnown RBP eCLIP21.42■■□□□ 1.02
TMEM259-206ENST00000589055 GAS2L2Q8NHY3 880 aa21.42■■□□□ 1.02
TMEM259-206ENST00000589055 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
TMEM259-206ENST00000589055 CAPN15O75808 1086 aa21.41■■□□□ 1.02
TMEM259-206ENST00000589055 GYS1P13807 737 aa21.41■■□□□ 1.02
TMEM259-206ENST00000589055 RFC4P35249 363 aa21.41■■□□□ 1.02
TMEM259-206ENST00000589055 INTS5Q6P9B9 1019 aaKnown RBP21.41■■□□□ 1.02
TMEM259-206ENST00000589055 NUDCQ9Y266 331 aa21.4■■□□□ 1.02
TMEM259-206ENST00000589055 CCDC87Q9NVE4 849 aa21.39■■□□□ 1.01
TMEM259-206ENST00000589055 KIAA1551Q9HCM1 1747 aa21.38■■□□□ 1.01
TMEM259-206ENST00000589055 CYP19A1P11511 503 aaPredicted RBP21.38■■□□□ 1.01
TMEM259-206ENST00000589055 USP42Q9H9J4 1324 aaKnown RBP21.37■■□□□ 1.01
TMEM259-206ENST00000589055 TEFQ10587 303 aa21.37■■□□□ 1.01
TMEM259-206ENST00000589055 NLGN1Q8N2Q7 840 aa21.37■■□□□ 1.01
TMEM259-206ENST00000589055 ZBTB1Q9Y2K1 713 aa21.37■■□□□ 1.01
TMEM259-206ENST00000589055 SOS1Q07889 1333 aaPredicted RBP21.36■■□□□ 1.01
TMEM259-206ENST00000589055 FKBP8Q14318 412 aa21.36■■□□□ 1.01
TMEM259-206ENST00000589055 TTC5Q8N0Z6 440 aa21.36■■□□□ 1.01
TMEM259-206ENST00000589055 C10orf71Q711Q0 1435 aa21.36■■□□□ 1.01
TMEM259-206ENST00000589055 KIF13BQ9NQT8 1826 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms