RNA–Protein interactions for RNA: ENST00000588892.1

U2AF1L4-210, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 2,582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-210	ENST00000588892	MAP3K5	Q99683	1374 aa		13.99	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	CSB-PGBD3	P0DP91	1061 aa		13.99	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	GAS2L3	Q86XJ1	694 aa		13.99	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	CAMTA1	Q9Y6Y1	1673 aa		13.99	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	PRDM11	Q9NQV5	511 aa		13.99	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	ABCA3	Q99758	1704 aa		13.99	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	HAP1	P54257	671 aa	Predicted RBP	13.98	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	TSPYL4	Q9UJ04	414 aa		13.98	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	NCAPD2	Q15021	1401 aa		13.98	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	RRP9	O43818	475 aa	Known RBP	13.98	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	CT47B1	P0C2W7	299 aa	Predicted RBP	13.98	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.98	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	FAM208A	Q9UK61	1670 aa	Known RBP	13.98	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	ZKSCAN2	Q63HK3	967 aa		13.97	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	LMO7	Q8WWI1	1683 aa		13.97	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	MEGF6	O75095	1541 aa		13.97	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	KCNQ3	O43525	872 aa		13.97	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	PIP4K2B	P78356	416 aa		13.97	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	MRPL50	Q8N5N7	158 aa	Known RBP	13.97	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	LRRC37A3	O60309	1634 aa		13.97	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	HSCB	Q8IWL3	235 aa		13.96	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	FOXD4L1	Q9NU39	408 aa		13.96	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	CPD	O75976	1380 aa		13.96	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	NECTIN2	Q92692	538 aa		13.96	□□□□□ -0.17
U2AF1L4-210	ENST00000588892	MVP	Q14764	893 aa	Known RBP	13.95	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	ATF7IP	Q6VMQ6	1270 aa		13.95	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	TRIM44	Q96DX7	344 aa	Predicted RBP	13.95	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	STRN4	Q9NRL3	753 aa		13.95	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	FTSJ3	Q8IY81	847 aa	Known RBP	13.95	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	DZIP1L	Q8IYY4	767 aa	Known RBP	13.95	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	TMEM57	Q8N5G2	664 aa		13.95	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	TNPO1	Q92973	898 aa	Known RBP	13.95	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.94	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	DDX11L8	A8MPP1	907 aa		13.94	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	ALDH1L2	Q3SY69	923 aa		13.94	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	CEMIP	Q8WUJ3	1361 aa		13.93	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	HTATSF1	O43719	755 aa	Known RBP	13.93	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	AKAP4	Q5JQC9	854 aa		13.93	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	LARP1	Q6PKG0	1096 aa	Known RBP	13.93	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	TAF7	Q15545	349 aa	Predicted RBP	13.92	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	RAPGEF4	Q8WZA2	1011 aa		13.92	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	COL5A2	P05997	1499 aa	Predicted RBP	13.92	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	TOM1L2	Q6ZVM7	507 aa		13.92	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	G2E3	Q7L622	706 aa		13.92	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	ITPRIP	Q8IWB1	547 aa		13.92	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	RNMT	O43148	476 aa	Known RBP	13.91	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	C1orf141	Q5JVX7	400 aa		13.91	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	CYP27B1	O15528	508 aa		13.9	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	DDIT3	P35638	169 aa		13.9	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	AAMP	Q13685	434 aa		13.9	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	AMOT	Q4VCS5	1084 aa		13.9	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	KIF16B	Q96L93	1317 aa		13.9	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	BTG4	Q9NY30	223 aa		13.9	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	WDR17	Q8IZU2	1322 aa		13.9	□□□□□ -0.18
U2AF1L4-210	ENST00000588892	PRAMEF22	A3QJZ6	481 aa		13.89	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	CD2BP2	O95400	341 aa	Known RBP	13.89	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	TAT	P17735	454 aa	Predicted RBP	13.89	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	KDM6A	O15550	1401 aa	Predicted RBP	13.89	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	SLC4A2	P04920	1241 aa		13.89	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	HSP90AB1	P08238	724 aa	Known RBP	13.89	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	BRPF1	P55201	1214 aa	Predicted RBP	13.89	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	LNPK	Q9C0E8	428 aa		13.89	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	PHKG2	P15735	406 aa		13.88	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	SLC39A6	Q13433	755 aa		13.88	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	ZNF428	Q96B54	188 aa		13.88	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.88	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	BTBD11	A6QL63	1104 aa		13.88	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	ADAMTS2	O95450	1211 aa		13.88	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	TEF	Q10587	303 aa		13.88	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	EVA1C	P58658	441 aa		13.87	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	C1orf115	Q9H7X2	142 aa		13.87	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	PHLPP1	O60346	1717 aa		13.87	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	EIF4A1	P60842	406 aa	Known RBP	13.87	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	KIAA1211	Q6ZU35	1233 aa		13.87	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	RBM42	Q9BTD8	480 aa	Known RBP	13.87	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	RGS12	O14924	1447 aa		13.87	□□□□□ -0.19
U2AF1L4-210	ENST00000588892		F6X3S4	739 aa		13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	IPO8	O15397	1037 aa	Known RBP	13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	EIF2S2	P20042	333 aa	Known RBP	13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	NFATC2IP	Q8NCF5	419 aa		13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	KDM3B	Q7LBC6	1761 aa		13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	COL16A1	Q07092	1604 aa	Predicted RBP	13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	ABCC6	O95255	1503 aa		13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	NUTM2E	B1AL46	878 aa	Predicted RBP	13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	ANXA1	P04083	346 aa		13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.86	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	UBAP1L	F5GYI3	381 aa		13.85	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	RAB3GAP1	Q15042	981 aa		13.85	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	GBP4	Q96PP9	640 aa		13.85	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	SIPA1L3	O60292	1781 aa	Predicted RBP	13.85	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	SCN11A	Q9UI33	1791 aa		13.85	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	RBM25	P49756	843 aa	Known RBP	13.85	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	HDAC1	Q13547	482 aa	Predicted RBP	13.85	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	SMC5	Q8IY18	1101 aa		13.85	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	ABCC4	O15439	1325 aa		13.85	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	SSFA2	P28290	1259 aa		13.84	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	RBM10	P98175	930 aa	Known RBP	13.84	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	KIF2C	Q99661	725 aa		13.84	□□□□□ -0.19
U2AF1L4-210	ENST00000588892	SPG7	Q9UQ90	795 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms