RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 TMF1P82094 1093 aa30.38■■■□□ 2.45
CAPNS1-205ENST00000588780 RTCBQ9Y3I0 505 aaKnown RBP30.38■■■□□ 2.45
CAPNS1-205ENST00000588780 NLGN1Q8N2Q7 840 aa30.37■■■□□ 2.45
CAPNS1-205ENST00000588780 CCDC87Q9NVE4 849 aa30.37■■■□□ 2.45
CAPNS1-205ENST00000588780 N4BP2Q86UW6 1770 aaPredicted RBP30.36■■■□□ 2.45
CAPNS1-205ENST00000588780 DPEP1P16444 411 aa30.35■■■□□ 2.45
CAPNS1-205ENST00000588780 PKD1L3Q7Z443 1732 aa30.35■■■□□ 2.45
CAPNS1-205ENST00000588780 MAP2P11137 1827 aaKnown RBP30.34■■■□□ 2.45
CAPNS1-205ENST00000588780 CAPN15O75808 1086 aa30.33■■■□□ 2.45
CAPNS1-205ENST00000588780 IFNL2Q8IZJ0 200 aa30.33■■■□□ 2.45
CAPNS1-205ENST00000588780 RBM46Q8TBY0 533 aaKnown RBP30.33■■■□□ 2.45
CAPNS1-205ENST00000588780 PARP3Q9Y6F1 533 aa30.33■■■□□ 2.45
CAPNS1-205ENST00000588780 KIF20BQ96Q89 1820 aa30.32■■■□□ 2.44
CAPNS1-205ENST00000588780 HTRA3P83110 453 aa30.32■■■□□ 2.44
CAPNS1-205ENST00000588780 C9orf131Q5VYM1 1079 aa30.32■■■□□ 2.44
CAPNS1-205ENST00000588780 RBM42Q9BTD8 480 aaKnown RBP30.32■■■□□ 2.44
CAPNS1-205ENST00000588780 ATG3Q9NT62 314 aa30.32■■■□□ 2.44
CAPNS1-205ENST00000588780 RFC4P35249 363 aa30.3■■■□□ 2.44
CAPNS1-205ENST00000588780 PHKG2P15735 406 aa30.29■■■□□ 2.44
CAPNS1-205ENST00000588780 KLRG1Q96E93 195 aa30.29■■■□□ 2.44
CAPNS1-205ENST00000588780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.29■■■□□ 2.44
CAPNS1-205ENST00000588780 C10orf71Q711Q0 1435 aa30.29■■■□□ 2.44
CAPNS1-205ENST00000588780 ARHGEF1Q92888 912 aaKnown RBP30.28■■■□□ 2.44
CAPNS1-205ENST00000588780 EYA1Q99502 592 aa30.28■■■□□ 2.44
CAPNS1-205ENST00000588780 KIF13BQ9NQT8 1826 aa30.28■■■□□ 2.44
CAPNS1-205ENST00000588780 WDR90Q96KV7 1748 aa30.27■■■□□ 2.44
CAPNS1-205ENST00000588780 CDCA8Q53HL2 280 aa30.27■■■□□ 2.44
CAPNS1-205ENST00000588780 COL13A1Q5TAT6 717 aaPredicted RBP30.27■■■□□ 2.44
CAPNS1-205ENST00000588780 KDM2BQ8NHM5 1336 aa30.26■■■□□ 2.44
CAPNS1-205ENST00000588780 PLEKHG2Q9H7P9 1386 aa30.26■■■□□ 2.43
CAPNS1-205ENST00000588780 ADRA2BP18089 450 aa30.25■■■□□ 2.43
CAPNS1-205ENST00000588780 FSTL1Q12841 308 aa30.25■■■□□ 2.43
CAPNS1-205ENST00000588780 KIAA1551Q9HCM1 1747 aa30.25■■■□□ 2.43
CAPNS1-205ENST00000588780 PIM2Q9P1W9 311 aa30.24■■■□□ 2.43
CAPNS1-205ENST00000588780 GYS1P13807 737 aa30.23■■■□□ 2.43
CAPNS1-205ENST00000588780 RNF181Q9P0P0 153 aa30.23■■■□□ 2.43
CAPNS1-205ENST00000588780 NCAPD2Q15021 1401 aa30.22■■■□□ 2.43
CAPNS1-205ENST00000588780 WASHC2AQ641Q2 1341 aa30.22■■■□□ 2.43
CAPNS1-205ENST00000588780 DALRD3Q5D0E6 543 aaKnown RBP30.21■■■□□ 2.43
CAPNS1-205ENST00000588780 TNS4Q8IZW8 715 aa30.21■■■□□ 2.43
CAPNS1-205ENST00000588780 RRAGCQ9HB90 399 aa30.21■■■□□ 2.43
CAPNS1-205ENST00000588780 C4AP0C0L4 1744 aa30.21■■■□□ 2.43
CAPNS1-205ENST00000588780 RPS6KA4O75676 772 aa30.2■■■□□ 2.43
CAPNS1-205ENST00000588780 RC3H1Q5TC82 1133 aaKnown RBP30.2■■■□□ 2.43
CAPNS1-205ENST00000588780 CARD14Q9BXL6 1004 aa30.2■■■□□ 2.43
CAPNS1-205ENST00000588780 KCPQ6ZWJ8 1503 aa30.2■■■□□ 2.42
CAPNS1-205ENST00000588780 JMYQ8N9B5 988 aa30.19■■■□□ 2.42
CAPNS1-205ENST00000588780 KDRP35968 1356 aa30.18■■■□□ 2.42
CAPNS1-205ENST00000588780 SLC4A9Q96Q91 983 aa30.18■■■□□ 2.42
CAPNS1-205ENST00000588780 CNTNAP4Q9C0A0 1308 aa30.18■■■□□ 2.42
CAPNS1-205ENST00000588780 KCNA3P22001 575 aa30.17■■■□□ 2.42
CAPNS1-205ENST00000588780 ERVV-2B6SEH9 535 aa30.16■■■□□ 2.42
CAPNS1-205ENST00000588780 HSP90AB1P08238 724 aaKnown RBP30.15■■■□□ 2.42
CAPNS1-205ENST00000588780 CABP4P57796 275 aa30.15■■■□□ 2.42
CAPNS1-205ENST00000588780 DCAF5Q96JK2 942 aa30.15■■■□□ 2.42
CAPNS1-205ENST00000588780 TNNT2P45379 298 aaPredicted RBP30.13■■■□□ 2.41
CAPNS1-205ENST00000588780 SMC1BQ8NDV3 1235 aa30.13■■■□□ 2.41
CAPNS1-205ENST00000588780 PTCD1O75127 700 aaKnown RBP30.12■■■□□ 2.41
CAPNS1-205ENST00000588780 SRP68Q9UHB9 627 aaKnown RBP30.12■■■□□ 2.41
CAPNS1-205ENST00000588780 BRCA1P38398 1863 aaKnown RBP30.12■■■□□ 2.41
CAPNS1-205ENST00000588780 ARFGEF1Q9Y6D6 1849 aa30.11■■■□□ 2.41
CAPNS1-205ENST00000588780 CHRNA5P30532 468 aa30.11■■■□□ 2.41
CAPNS1-205ENST00000588780 EIF4A2Q14240 407 aaKnown RBP30.11■■■□□ 2.41
CAPNS1-205ENST00000588780 POLKQ9UBT6 870 aa30.11■■■□□ 2.41
CAPNS1-205ENST00000588780 FKBP8Q14318 412 aa30.09■■■□□ 2.41
CAPNS1-205ENST00000588780 PLEKHO1Q53GL0 409 aaPredicted RBP30.09■■■□□ 2.41
CAPNS1-205ENST00000588780 CRKLP46109 303 aaKnown RBP30.08■■■□□ 2.41
CAPNS1-205ENST00000588780 ZNF530Q6P9A1 599 aaPredicted RBP30.08■■■□□ 2.41
CAPNS1-205ENST00000588780 ANKRD26Q9UPS8 1709 aa30.07■■■□□ 2.4
CAPNS1-205ENST00000588780 COL5A3P25940 1745 aaPredicted RBP30.06■■■□□ 2.4
CAPNS1-205ENST00000588780 PRELPP51888 382 aa30.06■■■□□ 2.4
CAPNS1-205ENST00000588780 DDR1Q08345 913 aa30.06■■■□□ 2.4
CAPNS1-205ENST00000588780 ZNF831Q5JPB2 1677 aa30.04■■■□□ 2.4
CAPNS1-205ENST00000588780 USP42Q9H9J4 1324 aaKnown RBP30.04■■■□□ 2.4
CAPNS1-205ENST00000588780 MTHFSP49914 203 aa30.04■■■□□ 2.4
CAPNS1-205ENST00000588780 POLR3GLQ9BT43 218 aa30.04■■■□□ 2.4
CAPNS1-205ENST00000588780 TNRC6CQ9HCJ0 1690 aaKnown RBP30.04■■■□□ 2.4
CAPNS1-205ENST00000588780 C1orf141Q5JVX7 400 aa30.03■■■□□ 2.4
CAPNS1-205ENST00000588780 RASSF7Q02833 373 aa30.02■■■□□ 2.4
CAPNS1-205ENST00000588780 MYH14Q7Z406 1995 aaKnown RBP30.02■■■□□ 2.4
CAPNS1-205ENST00000588780 ZPR1O75312 459 aa30.01■■■□□ 2.39
CAPNS1-205ENST00000588780 AMOTQ4VCS5 1084 aa30.01■■■□□ 2.39
CAPNS1-205ENST00000588780 HSPA1AP0DMV8 641 aaKnown RBP30■■■□□ 2.39
CAPNS1-205ENST00000588780 HSPA1BP0DMV9 641 aaKnown RBP30■■■□□ 2.39
CAPNS1-205ENST00000588780 KDM6AO15550 1401 aaPredicted RBP29.99■■■□□ 2.39
CAPNS1-205ENST00000588780 VEGFAP15692 232 aaPredicted RBP29.99■■■□□ 2.39
CAPNS1-205ENST00000588780 NFATC2IPQ8NCF5 419 aa29.99■■■□□ 2.39
CAPNS1-205ENST00000588780 POLRMTO00411 1230 aaKnown RBP29.98■■■□□ 2.39
CAPNS1-205ENST00000588780 ZC3H4Q9UPT8 1303 aaKnown RBP29.96■■■□□ 2.39
CAPNS1-205ENST00000588780 SBF1O95248 1867 aa29.96■■■□□ 2.39
CAPNS1-205ENST00000588780 LMNB1P20700 586 aa29.96■■■□□ 2.39
CAPNS1-205ENST00000588780 USPL1Q5W0Q7 1092 aa29.96■■■□□ 2.39
CAPNS1-205ENST00000588780 GLTPD2A6NH11 291 aa29.94■■■□□ 2.38
CAPNS1-205ENST00000588780 TM4SF1P30408 202 aa29.94■■■□□ 2.38
CAPNS1-205ENST00000588780 INTS5Q6P9B9 1019 aaKnown RBP29.92■■■□□ 2.38
CAPNS1-205ENST00000588780 AEBP1Q8IUX7 1158 aa29.89■■■□□ 2.38
CAPNS1-205ENST00000588780 DNAJC10Q8IXB1 793 aa29.89■■■□□ 2.38
CAPNS1-205ENST00000588780 TTLL6Q8N841 843 aa29.89■■■□□ 2.38
CAPNS1-205ENST00000588780 NFIXQ14938 502 aa29.87■■■□□ 2.37
CAPNS1-205ENST00000588780 C2CD5Q86YS7 1000 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms