RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 COL5A3P25940 1745 aaPredicted RBP24.38■■□□□ 1.49
HDAC5-209ENST00000588703 ITPK1Q13572 414 aa24.37■■□□□ 1.49
HDAC5-209ENST00000588703 ADAMTS7Q9UKP4 1686 aa24.37■■□□□ 1.49
HDAC5-209ENST00000588703 HMGB2P26583 209 aaKnown RBP24.36■■□□□ 1.49
HDAC5-209ENST00000588703 MAP3K5Q99683 1374 aa24.35■■□□□ 1.49
HDAC5-209ENST00000588703 SYT17Q9BSW7 474 aa24.35■■□□□ 1.49
HDAC5-209ENST00000588703 MSH5O43196 834 aa24.34■■□□□ 1.49
HDAC5-209ENST00000588703 CABP4P57796 275 aa24.34■■□□□ 1.49
HDAC5-209ENST00000588703 AK7Q96M32 723 aa24.34■■□□□ 1.49
HDAC5-209ENST00000588703 SLC4A9Q96Q91 983 aa24.34■■□□□ 1.49
HDAC5-209ENST00000588703 ATP6V1AP38606 617 aa24.33■■□□□ 1.49
HDAC5-209ENST00000588703 AKAP4Q5JQC9 854 aa24.33■■□□□ 1.49
HDAC5-209ENST00000588703 SMIM5Q71RC9 77 aa24.33■■□□□ 1.49
HDAC5-209ENST00000588703 MRC1P22897 1456 aa24.32■■□□□ 1.48
HDAC5-209ENST00000588703 POLD1P28340 1107 aa24.32■■□□□ 1.48
HDAC5-209ENST00000588703 MYH14Q7Z406 1995 aaKnown RBP24.31■■□□□ 1.48
HDAC5-209ENST00000588703 MTHFSDQ2M296 383 aaKnown RBP24.31■■□□□ 1.48
HDAC5-209ENST00000588703 FLAD1Q8NFF5 587 aa24.31■■□□□ 1.48
HDAC5-209ENST00000588703 CICQ96RK0 1608 aaPredicted RBP24.31■■□□□ 1.48
HDAC5-209ENST00000588703 TJP1Q07157 1748 aa24.3■■□□□ 1.48
HDAC5-209ENST00000588703 U2SURPO15042 1029 aaKnown RBP24.3■■□□□ 1.48
HDAC5-209ENST00000588703 PPP2R1AP30153 589 aa24.3■■□□□ 1.48
HDAC5-209ENST00000588703 MSL1Q68DK7 614 aa24.3■■□□□ 1.48
HDAC5-209ENST00000588703 NFATC2IPQ8NCF5 419 aa24.3■■□□□ 1.48
HDAC5-209ENST00000588703 RBM42Q9BTD8 480 aaKnown RBP24.29■■□□□ 1.48
HDAC5-209ENST00000588703 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
HDAC5-209ENST00000588703 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.28■■□□□ 1.48
HDAC5-209ENST00000588703 PHF14O94880 888 aa24.28■■□□□ 1.48
HDAC5-209ENST00000588703 UTRNP46939 3433 aa24.27■■□□□ 1.48
HDAC5-209ENST00000588703 SSFA2P28290 1259 aa24.27■■□□□ 1.48
HDAC5-209ENST00000588703 GNPATO15228 680 aa24.26■■□□□ 1.47
HDAC5-209ENST00000588703 RNMTO43148 476 aaKnown RBP24.26■■□□□ 1.47
HDAC5-209ENST00000588703 CFAP53Q96M91 514 aa24.26■■□□□ 1.47
HDAC5-209ENST00000588703 SLC52A2Q9HAB3 445 aa24.26■■□□□ 1.47
HDAC5-209ENST00000588703 SIPA1L3O60292 1781 aaPredicted RBP24.24■■□□□ 1.47
HDAC5-209ENST00000588703 PTCD1O75127 700 aaKnown RBP24.24■■□□□ 1.47
HDAC5-209ENST00000588703 C4AP0C0L4 1744 aa24.24■■□□□ 1.47
HDAC5-209ENST00000588703 DCAF8L1A6NGE4 600 aa24.23■■□□□ 1.47
HDAC5-209ENST00000588703 KLHL34Q8N239 644 aa24.23■■□□□ 1.47
HDAC5-209ENST00000588703 CNTNAP4Q9C0A0 1308 aa24.23■■□□□ 1.47
HDAC5-209ENST00000588703 UBR2Q8IWV8 1755 aa24.23■■□□□ 1.47
HDAC5-209ENST00000588703 GOLGB1Q14789 3259 aaKnown RBP24.23■■□□□ 1.47
HDAC5-209ENST00000588703 KCPQ6ZWJ8 1503 aa24.22■■□□□ 1.47
HDAC5-209ENST00000588703 RSPH6AQ9H0K4 717 aa24.22■■□□□ 1.47
HDAC5-209ENST00000588703 RC3H1Q5TC82 1133 aaKnown RBP24.21■■□□□ 1.47
HDAC5-209ENST00000588703 NLGN2Q8NFZ4 835 aa24.2■■□□□ 1.46
HDAC5-209ENST00000588703 PRKAR2BP31323 418 aa24.19■■□□□ 1.46
HDAC5-209ENST00000588703 GAS2L2Q8NHY3 880 aa24.19■■□□□ 1.46
HDAC5-209ENST00000588703 PHACTR3Q96KR7 559 aa24.19■■□□□ 1.46
HDAC5-209ENST00000588703 CHD4Q14839 1912 aa24.19■■□□□ 1.46
HDAC5-209ENST00000588703 SLC39A6Q13433 755 aa24.18■■□□□ 1.46
HDAC5-209ENST00000588703 RTCBQ9Y3I0 505 aaKnown RBP24.18■■□□□ 1.46
HDAC5-209ENST00000588703 NUDCQ9Y266 331 aa24.17■■□□□ 1.46
HDAC5-209ENST00000588703 RPS6KA4O75676 772 aa24.16■■□□□ 1.46
HDAC5-209ENST00000588703 U2AF1L5P0DN76 240 aaPredicted RBP24.16■■□□□ 1.46
HDAC5-209ENST00000588703 CRKLP46109 303 aaKnown RBP24.16■■□□□ 1.46
HDAC5-209ENST00000588703 U2AF1Q01081 240 aaKnown RBP eCLIP24.16■■□□□ 1.46
HDAC5-209ENST00000588703 IL17REQ8NFR9 667 aa24.16■■□□□ 1.46
HDAC5-209ENST00000588703 GNAT3A8MTJ3 354 aa24.15■■□□□ 1.46
HDAC5-209ENST00000588703 ADRA2BP18089 450 aa24.15■■□□□ 1.46
HDAC5-209ENST00000588703 TRAPPC3LQ5T215 181 aa24.15■■□□□ 1.46
HDAC5-209ENST00000588703 YY1P25490 414 aa24.14■■□□□ 1.45
HDAC5-209ENST00000588703 DNAJC10Q8IXB1 793 aa24.14■■□□□ 1.45
HDAC5-209ENST00000588703 ARHGEF1Q92888 912 aaKnown RBP24.14■■□□□ 1.45
HDAC5-209ENST00000588703 CEMIPQ8WUJ3 1361 aa24.13■■□□□ 1.45
HDAC5-209ENST00000588703 FCHSD2O94868 740 aa24.11■■□□□ 1.45
HDAC5-209ENST00000588703 INTS5Q6P9B9 1019 aaKnown RBP24.11■■□□□ 1.45
HDAC5-209ENST00000588703 CD2APQ9Y5K6 639 aa24.11■■□□□ 1.45
HDAC5-209ENST00000588703 KIF13BQ9NQT8 1826 aa24.11■■□□□ 1.45
HDAC5-209ENST00000588703 DLG5Q8TDM6 1919 aa24.1■■□□□ 1.45
HDAC5-209ENST00000588703 MMP10P09238 476 aa24.09■■□□□ 1.45
HDAC5-209ENST00000588703 GYS1P13807 737 aa24.09■■□□□ 1.45
HDAC5-209ENST00000588703 TEFQ10587 303 aa24.09■■□□□ 1.45
HDAC5-209ENST00000588703 GPR162Q16538 588 aa24.09■■□□□ 1.45
HDAC5-209ENST00000588703 KIAA1551Q9HCM1 1747 aa24.08■■□□□ 1.45
HDAC5-209ENST00000588703 CYP19A1P11511 503 aaPredicted RBP24.08■■□□□ 1.45
HDAC5-209ENST00000588703 RFC4P35249 363 aa24.08■■□□□ 1.45
HDAC5-209ENST00000588703 DDX10Q13206 875 aaKnown RBP24.08■■□□□ 1.45
HDAC5-209ENST00000588703 CCDC87Q9NVE4 849 aa24.08■■□□□ 1.45
HDAC5-209ENST00000588703 VSIG10Q8N0Z9 540 aa24.07■■□□□ 1.44
HDAC5-209ENST00000588703 PELP1Q8IZL8 1130 aaKnown RBP24.06■■□□□ 1.44
HDAC5-209ENST00000588703 NLGN1Q8N2Q7 840 aa24.06■■□□□ 1.44
HDAC5-209ENST00000588703 SOS1Q07889 1333 aaPredicted RBP24.06■■□□□ 1.44
HDAC5-209ENST00000588703 YBX3P16989 372 aaKnown RBP eCLIP24.05■■□□□ 1.44
HDAC5-209ENST00000588703 ZNF790Q6PG37 636 aa24.05■■□□□ 1.44
HDAC5-209ENST00000588703 TTC5Q8N0Z6 440 aa24.05■■□□□ 1.44
HDAC5-209ENST00000588703 ZNF496Q96IT1 587 aaPredicted RBP24.05■■□□□ 1.44
HDAC5-209ENST00000588703 SRP68Q9UHB9 627 aaKnown RBP24.05■■□□□ 1.44
HDAC5-209ENST00000588703 USP42Q9H9J4 1324 aaKnown RBP24.05■■□□□ 1.44
HDAC5-209ENST00000588703 ZBTB1Q9Y2K1 713 aa24.03■■□□□ 1.44
HDAC5-209ENST00000588703 N4BP2Q86UW6 1770 aaPredicted RBP24.03■■□□□ 1.44
HDAC5-209ENST00000588703 HEG1Q9ULI3 1381 aa24.03■■□□□ 1.44
HDAC5-209ENST00000588703 RALBP1Q15311 655 aa24.02■■□□□ 1.44
HDAC5-209ENST00000588703 MCM10Q7L590 875 aa24.02■■□□□ 1.44
HDAC5-209ENST00000588703 C10orf71Q711Q0 1435 aa24.01■■□□□ 1.43
HDAC5-209ENST00000588703 KCNQ3O43525 872 aa24.01■■□□□ 1.43
HDAC5-209ENST00000588703 FKBP8Q14318 412 aa24.01■■□□□ 1.43
HDAC5-209ENST00000588703 COL15A1P39059 1388 aa24.01■■□□□ 1.43
HDAC5-209ENST00000588703 DCTN1Q14203 1278 aa24■■□□□ 1.43
HDAC5-209ENST00000588703 PLEKHF1Q96S99 279 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms