RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 AK7Q96M32 723 aa19.46■□□□□ 0.71
DDX39A-208ENST00000588692 CFAP53Q96M91 514 aa19.46■□□□□ 0.71
DDX39A-208ENST00000588692 ARXQ96QS3 562 aa19.46■□□□□ 0.71
DDX39A-208ENST00000588692 MAP3K5Q99683 1374 aa19.45■□□□□ 0.7
DDX39A-208ENST00000588692 COL23A1Q86Y22 540 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-208ENST00000588692 ADAMTS7Q9UKP4 1686 aa19.44■□□□□ 0.7
DDX39A-208ENST00000588692 ATP6V1AP38606 617 aa19.44■□□□□ 0.7
DDX39A-208ENST00000588692 FHDC1Q9C0D6 1143 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-208ENST00000588692 COL5A3P25940 1745 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-208ENST00000588692 MRC1P22897 1456 aa19.43■□□□□ 0.7
DDX39A-208ENST00000588692 DCAF8L1A6NGE4 600 aa19.43■□□□□ 0.7
DDX39A-208ENST00000588692 MSH5O43196 834 aa19.43■□□□□ 0.7
DDX39A-208ENST00000588692 CICQ96RK0 1608 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-208ENST00000588692 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
DDX39A-208ENST00000588692 LINC00116Q8NCU8 138 aa19.42■□□□□ 0.7
DDX39A-208ENST00000588692 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
DDX39A-208ENST00000588692 ITPK1Q13572 414 aa19.41■□□□□ 0.7
DDX39A-208ENST00000588692 SYT17Q9BSW7 474 aa19.41■□□□□ 0.7
DDX39A-208ENST00000588692 SSFA2P28290 1259 aa19.41■□□□□ 0.7
DDX39A-208ENST00000588692 MTHFSDQ2M296 383 aaKnown RBP19.41■□□□□ 0.7
DDX39A-208ENST00000588692 NFATC2IPQ8NCF5 419 aa19.41■□□□□ 0.7
DDX39A-208ENST00000588692 NUDCQ9Y266 331 aa19.4■□□□□ 0.7
DDX39A-208ENST00000588692 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
DDX39A-208ENST00000588692 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
DDX39A-208ENST00000588692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.38■□□□□ 0.69
DDX39A-208ENST00000588692 GNPATO15228 680 aa19.37■□□□□ 0.69
DDX39A-208ENST00000588692 RNMTO43148 476 aaKnown RBP19.37■□□□□ 0.69
DDX39A-208ENST00000588692 GAS2L2Q8NHY3 880 aa19.37■□□□□ 0.69
DDX39A-208ENST00000588692 SLC4A9Q96Q91 983 aa19.37■□□□□ 0.69
DDX39A-208ENST00000588692 TJP1Q07157 1748 aa19.37■□□□□ 0.69
DDX39A-208ENST00000588692 CNTNAP4Q9C0A0 1308 aa19.36■□□□□ 0.69
DDX39A-208ENST00000588692 PHF14O94880 888 aa19.36■□□□□ 0.69
DDX39A-208ENST00000588692 AMIGO3Q86WK7 504 aa19.36■□□□□ 0.69
DDX39A-208ENST00000588692 RC3H1Q5TC82 1133 aaKnown RBP19.35■□□□□ 0.69
DDX39A-208ENST00000588692 LGR6Q9HBX8 967 aa19.35■□□□□ 0.69
DDX39A-208ENST00000588692 PTCD1O75127 700 aaKnown RBP19.35■□□□□ 0.69
DDX39A-208ENST00000588692 MSL1Q68DK7 614 aa19.35■□□□□ 0.69
DDX39A-208ENST00000588692 RSPH6AQ9H0K4 717 aa19.34■□□□□ 0.69
DDX39A-208ENST00000588692 RTCBQ9Y3I0 505 aaKnown RBP19.34■□□□□ 0.69
DDX39A-208ENST00000588692 MYH14Q7Z406 1995 aaKnown RBP19.33■□□□□ 0.69
DDX39A-208ENST00000588692 UBR2Q8IWV8 1755 aa19.33■□□□□ 0.68
DDX39A-208ENST00000588692 GNAT3A8MTJ3 354 aa19.33■□□□□ 0.68
DDX39A-208ENST00000588692 ADRA2BP18089 450 aa19.33■□□□□ 0.68
DDX39A-208ENST00000588692 PRKAR2BP31323 418 aa19.33■□□□□ 0.68
DDX39A-208ENST00000588692 SIPA1L3O60292 1781 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-208ENST00000588692 U2AF1L5P0DN76 240 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-208ENST00000588692 U2AF1Q01081 240 aaKnown RBP eCLIP19.32■□□□□ 0.682e-6■□□□□ 10.7
DDX39A-208ENST00000588692 KLHL34Q8N239 644 aa19.32■□□□□ 0.68
DDX39A-208ENST00000588692 KCPQ6ZWJ8 1503 aa19.32■□□□□ 0.68
DDX39A-208ENST00000588692 C4AP0C0L4 1744 aa19.31■□□□□ 0.68
DDX39A-208ENST00000588692 RPS6KA4O75676 772 aa19.3■□□□□ 0.68
DDX39A-208ENST00000588692 FCHSD2O94868 740 aa19.3■□□□□ 0.68
DDX39A-208ENST00000588692 TRAPPC3LQ5T215 181 aa19.3■□□□□ 0.68
DDX39A-208ENST00000588692 SMIM5Q71RC9 77 aa19.29■□□□□ 0.68
DDX39A-208ENST00000588692 CEMIPQ8WUJ3 1361 aa19.29■□□□□ 0.68
DDX39A-208ENST00000588692 CRKLP46109 303 aaKnown RBP19.28■□□□□ 0.68
DDX39A-208ENST00000588692 TEFQ10587 303 aa19.28■□□□□ 0.68
DDX39A-208ENST00000588692 PHACTR3Q96KR7 559 aa19.28■□□□□ 0.68
DDX39A-208ENST00000588692 CD2APQ9Y5K6 639 aa19.28■□□□□ 0.68
DDX39A-208ENST00000588692 SLC39A6Q13433 755 aa19.27■□□□□ 0.67
DDX39A-208ENST00000588692 RALBP1Q15311 655 aa19.27■□□□□ 0.67
DDX39A-208ENST00000588692 VSIG10Q8N0Z9 540 aa19.27■□□□□ 0.67
DDX39A-208ENST00000588692 IL17REQ8NFR9 667 aa19.27■□□□□ 0.67
DDX39A-208ENST00000588692 TTC5Q8N0Z6 440 aa19.26■□□□□ 0.67
DDX39A-208ENST00000588692 NLGN2Q8NFZ4 835 aa19.26■□□□□ 0.67
DDX39A-208ENST00000588692 ARHGEF1Q92888 912 aaKnown RBP19.26■□□□□ 0.67
DDX39A-208ENST00000588692 CHD4Q14839 1912 aa19.25■□□□□ 0.67
DDX39A-208ENST00000588692 YY1P25490 414 aa19.25■□□□□ 0.67
DDX39A-208ENST00000588692 RFC4P35249 363 aa19.25■□□□□ 0.67
DDX39A-208ENST00000588692 DNAJC10Q8IXB1 793 aa19.25■□□□□ 0.67
DDX39A-208ENST00000588692 NLGN1Q8N2Q7 840 aa19.25■□□□□ 0.67
DDX39A-208ENST00000588692 DDX10Q13206 875 aaKnown RBP19.24■□□□□ 0.67
DDX39A-208ENST00000588692 GPR162Q16538 588 aa19.23■□□□□ 0.67
DDX39A-208ENST00000588692 CCDC87Q9NVE4 849 aa19.23■□□□□ 0.67
DDX39A-208ENST00000588692 NEFMP07197 916 aa19.22■□□□□ 0.67
DDX39A-208ENST00000588692 CYP19A1P11511 503 aaPredicted RBP19.22■□□□□ 0.67
DDX39A-208ENST00000588692 INTS5Q6P9B9 1019 aaKnown RBP19.22■□□□□ 0.67
DDX39A-208ENST00000588692 ZNF790Q6PG37 636 aa19.22■□□□□ 0.67
DDX39A-208ENST00000588692 RTF1Q92541 710 aaKnown RBP19.22■□□□□ 0.67
DDX39A-208ENST00000588692 KIF13BQ9NQT8 1826 aa19.22■□□□□ 0.67
DDX39A-208ENST00000588692 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
DDX39A-208ENST00000588692 MMP10P09238 476 aa19.22■□□□□ 0.67
DDX39A-208ENST00000588692 GYS1P13807 737 aa19.22■□□□□ 0.67
DDX39A-208ENST00000588692 ZEB1P37275 1124 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-208ENST00000588692 USP42Q9H9J4 1324 aaKnown RBP19.21■□□□□ 0.67
DDX39A-208ENST00000588692 HEG1Q9ULI3 1381 aa19.2■□□□□ 0.66
DDX39A-208ENST00000588692 DLG5Q8TDM6 1919 aa19.2■□□□□ 0.66
DDX39A-208ENST00000588692 PNNQ9H307 717 aaKnown RBP19.2■□□□□ 0.66
DDX39A-208ENST00000588692 SOS1Q07889 1333 aaPredicted RBP19.2■□□□□ 0.66
DDX39A-208ENST00000588692 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
DDX39A-208ENST00000588692 ZNF496Q96IT1 587 aaPredicted RBP19.19■□□□□ 0.66
DDX39A-208ENST00000588692 TEX13AQ9BXU3 409 aaPredicted RBP19.19■□□□□ 0.66
DDX39A-208ENST00000588692 UTRNP46939 3433 aa19.18■□□□□ 0.66
DDX39A-208ENST00000588692 BTBD11A6QL63 1104 aa19.18■□□□□ 0.66
DDX39A-208ENST00000588692 STARD3NLO95772 234 aa19.18■□□□□ 0.66
DDX39A-208ENST00000588692 FMNL2Q96PY5 1086 aa19.18■□□□□ 0.66
DDX39A-208ENST00000588692 MYBBP1AQ9BQG0 1328 aaKnown RBP19.18■□□□□ 0.66
DDX39A-208ENST00000588692 COL15A1P39059 1388 aa19.18■□□□□ 0.66
DDX39A-208ENST00000588692 ZBTB1Q9Y2K1 713 aa19.17■□□□□ 0.66
DDX39A-208ENST00000588692 C10orf71Q711Q0 1435 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms