RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 SETDB1Q15047 1291 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 RINLQ6ZS11 566 aa7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 NUP153P49790 1475 aaKnown RBP7.7□□□□□ -1.18
AP000547.3-204ENST00000588548 TCOF1Q13428 1488 aaKnown RBP7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 HTATSF1O43719 755 aaKnown RBP7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 CAND2O75155 1236 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 IVLP07476 585 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 ARMCX6Q7L4S7 300 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 STAG1Q8WVM7 1258 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 ERO1AQ96HE7 468 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 IRAK4Q9NWZ3 460 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 NSFL1CQ9UNZ2 370 aaKnown RBP7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 PARD3Q8TEW0 1356 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 REXO1L1PQ8IX06 675 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 KLHL23Q8NBE8 558 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 CHMP7Q8WUX9 453 aaPredicted RBP7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 PIK3R5Q8WYR1 880 aa7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 RTF1Q92541 710 aaKnown RBP7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 ZNF215Q9UL58 517 aaPredicted RBP7.69□□□□□ -1.18
AP000547.3-204ENST00000588548 KIAA0556O60303 1618 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 ERBB3P21860 1342 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 POLR3GO15318 223 aaPredicted RBP7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 SGSM2O43147 1006 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 FAM163BP0C2L3 166 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 NEFHP12036 1026 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 ACTN2P35609 894 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 ELF2Q15723 593 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 EXOC6BQ9Y2D4 811 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 PLB1Q6P1J6 1458 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 TEX14Q8IWB6 1497 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 ZNF521Q96K83 1311 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 PRG4Q92954 1404 aaPredicted RBP7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 ATXN8OSP0DMR3 200 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 HDAC1Q13547 482 aaPredicted RBP7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 AK7Q96M32 723 aa7.68□□□□□ -1.18
AP000547.3-204ENST00000588548 NRDCO43847 1150 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 ZRANB2O95218 330 aaKnown RBP eCLIP7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 TBC1D8BQ0IIM8 1120 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 AP1ARQ63HQ0 302 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 DNAAF4Q8WXU2 420 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 EXOC4Q96A65 974 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 C16orf45Q96MC5 204 aaPredicted RBP7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 TSPAN18Q96SJ8 248 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 CEP170Q5SW79 1584 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 KDM4AO75164 1064 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 RPS6KA5O75582 802 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 NEBLO76041 1014 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 CCDC186Q7Z3E2 898 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 FMNL3Q8IVF7 1028 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 A1CFQ9NQ94 594 aaKnown RBP7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 ANAPC4Q9UJX5 808 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 SMC3Q9UQE7 1217 aa7.67□□□□□ -1.18
AP000547.3-204ENST00000588548 YEATS2Q9ULM3 1422 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 KIF2AO00139 706 aaPredicted RBP7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 GRIK3Q13003 919 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 TRAF1Q13077 416 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 EFCAB13Q8IY85 973 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 TRMT2AQ8IZ69 625 aaKnown RBP7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 CCDC26Q8TAB7 109 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 SYAP1Q96A49 352 aaPredicted RBP7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 MPHOSPH9Q99550 1183 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 KDM4CQ9H3R0 1056 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 SUDS3Q9H7L9 328 aaPredicted RBP7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 GNL3LQ9NVN8 582 aaKnown RBP7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 KDM5CP41229 1560 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 KINO60870 393 aaKnown RBP7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 CLCN6P51797 869 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 GOLGA2Q08379 1002 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 ARHGEF1Q92888 912 aaKnown RBP7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 SLC24A3Q9HC58 644 aa7.66□□□□□ -1.18
AP000547.3-204ENST00000588548 CLASP1Q7Z460 1538 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 ABCC5O15440 1437 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 ATP8B1O43520 1251 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 BCAR3O75815 825 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 RWDD2BP57060 319 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 SLFN5Q08AF3 891 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 ZRSR1Q15695 479 aaKnown RBP7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 CCDC27Q2M243 656 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 TEX11Q8IYF3 940 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 JPH4Q96JJ6 628 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 SH3GL3Q99963 347 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 PCDHB15Q9Y5E8 787 aa7.65□□□□□ -1.18
AP000547.3-204ENST00000588548 ANKRD30AQ9BXX3 1397 aa7.65□□□□□ -1.19
AP000547.3-204ENST00000588548 U2SURPO15042 1029 aaKnown RBP7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 MYBL2P10244 700 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 ELF1P32519 619 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 MNAT1P51948 309 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 WWC2Q6AWC2 1192 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 TADA2BQ86TJ2 420 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 CADPS2Q86UW7 1296 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 GIMAP7Q8NHV1 300 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 NKTRP30414 1462 aaKnown RBP7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 USP47Q96K76 1375 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 A0A087WUV0 522 aaPredicted RBP7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 USP8P40818 1118 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 DAPK1P53355 1430 aa7.64□□□□□ -1.19
AP000547.3-204ENST00000588548 SF3A1Q15459 793 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms