RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
RPRD1A-206ENST00000588459 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
RPRD1A-206ENST00000588459 ITPK1Q13572 414 aa18.49■□□□□ 0.55
RPRD1A-206ENST00000588459 AKAP4Q5JQC9 854 aa18.49■□□□□ 0.55
RPRD1A-206ENST00000588459 AMIGO3Q86WK7 504 aa18.49■□□□□ 0.55
RPRD1A-206ENST00000588459 ARXQ96QS3 562 aa18.49■□□□□ 0.55
RPRD1A-206ENST00000588459 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
RPRD1A-206ENST00000588459 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
RPRD1A-206ENST00000588459 RBM42Q9BTD8 480 aaKnown RBP18.48■□□□□ 0.55
RPRD1A-206ENST00000588459 FHDC1Q9C0D6 1143 aaPredicted RBP18.48■□□□□ 0.55
RPRD1A-206ENST00000588459 PHF14O94880 888 aa18.47■□□□□ 0.55
RPRD1A-206ENST00000588459 MSL1Q68DK7 614 aa18.47■□□□□ 0.55
RPRD1A-206ENST00000588459 NFATC2IPQ8NCF5 419 aa18.47■□□□□ 0.55
RPRD1A-206ENST00000588459 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
RPRD1A-206ENST00000588459 HMGB2P26583 209 aaKnown RBP18.46■□□□□ 0.55
RPRD1A-206ENST00000588459 POLD1P28340 1107 aa18.46■□□□□ 0.55
RPRD1A-206ENST00000588459 SLC4A9Q96Q91 983 aa18.46■□□□□ 0.55
RPRD1A-206ENST00000588459 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
RPRD1A-206ENST00000588459 KLHL34Q8N239 644 aa18.45■□□□□ 0.54
RPRD1A-206ENST00000588459 COL5A3P25940 1745 aaPredicted RBP18.45■□□□□ 0.54
RPRD1A-206ENST00000588459 ZNF831Q5JPB2 1677 aa18.44■□□□□ 0.54
RPRD1A-206ENST00000588459 SYT17Q9BSW7 474 aa18.44■□□□□ 0.54
RPRD1A-206ENST00000588459 ADAMTS7Q9UKP4 1686 aa18.44■□□□□ 0.54
RPRD1A-206ENST00000588459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.43■□□□□ 0.54
RPRD1A-206ENST00000588459 GNPATO15228 680 aa18.43■□□□□ 0.54
RPRD1A-206ENST00000588459 RNMTO43148 476 aaKnown RBP18.43■□□□□ 0.54
RPRD1A-206ENST00000588459 PTCD1O75127 700 aaKnown RBP18.43■□□□□ 0.54
RPRD1A-206ENST00000588459 FLAD1Q8NFF5 587 aa18.43■□□□□ 0.54
RPRD1A-206ENST00000588459 MRC1P22897 1456 aa18.43■□□□□ 0.54
RPRD1A-206ENST00000588459 SLC52A2Q9HAB3 445 aa18.42■□□□□ 0.54
RPRD1A-206ENST00000588459 TJP1Q07157 1748 aa18.41■□□□□ 0.54
RPRD1A-206ENST00000588459 SSFA2P28290 1259 aa18.41■□□□□ 0.54
RPRD1A-206ENST00000588459 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
RPRD1A-206ENST00000588459 NUDCQ9Y266 331 aa18.41■□□□□ 0.54
RPRD1A-206ENST00000588459 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
RPRD1A-206ENST00000588459 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
RPRD1A-206ENST00000588459 UTRNP46939 3433 aa18.39■□□□□ 0.54
RPRD1A-206ENST00000588459 MYH14Q7Z406 1995 aaKnown RBP18.39■□□□□ 0.53
RPRD1A-206ENST00000588459 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
RPRD1A-206ENST00000588459 U2AF1L5P0DN76 240 aaPredicted RBP18.39■□□□□ 0.53
RPRD1A-206ENST00000588459 U2AF1Q01081 240 aaKnown RBP eCLIP18.39■□□□□ 0.53
RPRD1A-206ENST00000588459 SLC39A6Q13433 755 aa18.39■□□□□ 0.53
RPRD1A-206ENST00000588459 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.53
RPRD1A-206ENST00000588459 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
RPRD1A-206ENST00000588459 PHACTR3Q96KR7 559 aa18.38■□□□□ 0.53
RPRD1A-206ENST00000588459 CICQ96RK0 1608 aaPredicted RBP18.38■□□□□ 0.53
RPRD1A-206ENST00000588459 CNTNAP4Q9C0A0 1308 aa18.37■□□□□ 0.53
RPRD1A-206ENST00000588459 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
RPRD1A-206ENST00000588459 KCPQ6ZWJ8 1503 aa18.36■□□□□ 0.53
RPRD1A-206ENST00000588459 NLGN2Q8NFZ4 835 aa18.36■□□□□ 0.53
RPRD1A-206ENST00000588459 RTCBQ9Y3I0 505 aaKnown RBP18.36■□□□□ 0.53
RPRD1A-206ENST00000588459 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
RPRD1A-206ENST00000588459 C4AP0C0L4 1744 aa18.35■□□□□ 0.53
RPRD1A-206ENST00000588459 RC3H1Q5TC82 1133 aaKnown RBP18.35■□□□□ 0.53
RPRD1A-206ENST00000588459 IL17REQ8NFR9 667 aa18.35■□□□□ 0.53
RPRD1A-206ENST00000588459 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
RPRD1A-206ENST00000588459 GOLGB1Q14789 3259 aaKnown RBP18.34■□□□□ 0.53
RPRD1A-206ENST00000588459 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
RPRD1A-206ENST00000588459 TRAPPC3LQ5T215 181 aa18.34■□□□□ 0.53
RPRD1A-206ENST00000588459 DNAJC10Q8IXB1 793 aa18.34■□□□□ 0.53
RPRD1A-206ENST00000588459 RPS6KA4O75676 772 aa18.33■□□□□ 0.52
RPRD1A-206ENST00000588459 TEFQ10587 303 aa18.33■□□□□ 0.52
RPRD1A-206ENST00000588459 FCHSD2O94868 740 aa18.32■□□□□ 0.52
RPRD1A-206ENST00000588459 ARHGEF1Q92888 912 aaKnown RBP18.32■□□□□ 0.52
RPRD1A-206ENST00000588459 PELP1Q8IZL8 1130 aaKnown RBP18.31■□□□□ 0.52
RPRD1A-206ENST00000588459 ADRA2BP18089 450 aa18.3■□□□□ 0.52
RPRD1A-206ENST00000588459 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
RPRD1A-206ENST00000588459 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
RPRD1A-206ENST00000588459 YY1P25490 414 aa18.29■□□□□ 0.52
RPRD1A-206ENST00000588459 RFC4P35249 363 aa18.29■□□□□ 0.52
RPRD1A-206ENST00000588459 RALBP1Q15311 655 aa18.29■□□□□ 0.52
RPRD1A-206ENST00000588459 GPR162Q16538 588 aa18.29■□□□□ 0.52
RPRD1A-206ENST00000588459 INTS5Q6P9B9 1019 aaKnown RBP18.29■□□□□ 0.52
RPRD1A-206ENST00000588459 MMP10P09238 476 aa18.28■□□□□ 0.52
RPRD1A-206ENST00000588459 MCM10Q7L590 875 aa18.28■□□□□ 0.52
RPRD1A-206ENST00000588459 CCDC87Q9NVE4 849 aa18.28■□□□□ 0.52
RPRD1A-206ENST00000588459 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.52
RPRD1A-206ENST00000588459 CYP19A1P11511 503 aaPredicted RBP18.27■□□□□ 0.52
RPRD1A-206ENST00000588459 GYS1P13807 737 aa18.27■□□□□ 0.52
RPRD1A-206ENST00000588459 DCTN1Q14203 1278 aa18.27■□□□□ 0.52
RPRD1A-206ENST00000588459 RTF1Q92541 710 aaKnown RBP18.27■□□□□ 0.52
RPRD1A-206ENST00000588459 SRP68Q9UHB9 627 aaKnown RBP18.27■□□□□ 0.52
RPRD1A-206ENST00000588459 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
RPRD1A-206ENST00000588459 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
RPRD1A-206ENST00000588459 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
RPRD1A-206ENST00000588459 ZBTB1Q9Y2K1 713 aa18.26■□□□□ 0.51
RPRD1A-206ENST00000588459 CD2APQ9Y5K6 639 aa18.26■□□□□ 0.51
RPRD1A-206ENST00000588459 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
RPRD1A-206ENST00000588459 KCNQ3O43525 872 aa18.25■□□□□ 0.51
RPRD1A-206ENST00000588459 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
RPRD1A-206ENST00000588459 SOS1Q07889 1333 aaPredicted RBP18.24■□□□□ 0.51
RPRD1A-206ENST00000588459 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
RPRD1A-206ENST00000588459 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
RPRD1A-206ENST00000588459 CHD4Q14839 1912 aa18.24■□□□□ 0.51
RPRD1A-206ENST00000588459 NEFMP07197 916 aa18.24■□□□□ 0.51
RPRD1A-206ENST00000588459 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
RPRD1A-206ENST00000588459 COL15A1P39059 1388 aa18.23■□□□□ 0.51
RPRD1A-206ENST00000588459 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
RPRD1A-206ENST00000588459 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
RPRD1A-206ENST00000588459 WWC3Q9ULE0 1092 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms