RNA–Protein interactions for RNA: ENST00000588329.5

RAD23A-204, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-204ENST00000588329 ATP6V1AP38606 617 aa24.34■■□□□ 1.49
RAD23A-204ENST00000588329 LINC00116Q8NCU8 138 aa24.34■■□□□ 1.49
RAD23A-204ENST00000588329 AMOTQ4VCS5 1084 aa24.33■■□□□ 1.49
RAD23A-204ENST00000588329 C1orf141Q5JVX7 400 aa24.33■■□□□ 1.49
RAD23A-204ENST00000588329 RBM42Q9BTD8 480 aaKnown RBP24.33■■□□□ 1.49
RAD23A-204ENST00000588329 CABP4P57796 275 aa24.32■■□□□ 1.48
RAD23A-204ENST00000588329 C1QTNF8P60827 252 aa24.32■■□□□ 1.48
RAD23A-204ENST00000588329 ITPK1Q13572 414 aa24.32■■□□□ 1.48
RAD23A-204ENST00000588329 DCAF5Q96JK2 942 aa24.32■■□□□ 1.48
RAD23A-204ENST00000588329 HSP90AB1P08238 724 aaKnown RBP24.31■■□□□ 1.48
RAD23A-204ENST00000588329 UTRNP46939 3433 aa24.31■■□□□ 1.48
RAD23A-204ENST00000588329 QSER1Q2KHR3 1735 aa24.3■■□□□ 1.48
RAD23A-204ENST00000588329 KDM6AO15550 1401 aaPredicted RBP24.3■■□□□ 1.48
RAD23A-204ENST00000588329 PELP1Q8IZL8 1130 aaKnown RBP24.3■■□□□ 1.48
RAD23A-204ENST00000588329 ERVV-2B6SEH9 535 aa24.29■■□□□ 1.48
RAD23A-204ENST00000588329 DIAPH1O60610 1272 aaKnown RBP24.29■■□□□ 1.48
RAD23A-204ENST00000588329 C4BP0C0L5 1744 aa24.28■■□□□ 1.48
RAD23A-204ENST00000588329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.28■■□□□ 1.48
RAD23A-204ENST00000588329 PRKRIP1Q9H875 184 aaPredicted RBP24.28■■□□□ 1.48
RAD23A-204ENST00000588329 TAF1LQ8IZX4 1826 aa24.28■■□□□ 1.48
RAD23A-204ENST00000588329 GNPATO15228 680 aa24.27■■□□□ 1.48
RAD23A-204ENST00000588329 NFATC2IPQ8NCF5 419 aa24.27■■□□□ 1.48
RAD23A-204ENST00000588329 U2SURPO15042 1029 aaKnown RBP24.26■■□□□ 1.47
RAD23A-204ENST00000588329 FLAD1Q8NFF5 587 aa24.26■■□□□ 1.47
RAD23A-204ENST00000588329 NLGN2Q8NFZ4 835 aa24.26■■□□□ 1.47
RAD23A-204ENST00000588329 SLC4A9Q96Q91 983 aa24.26■■□□□ 1.47
RAD23A-204ENST00000588329 KDRP35968 1356 aa24.26■■□□□ 1.47
RAD23A-204ENST00000588329 PTCD1O75127 700 aaKnown RBP24.25■■□□□ 1.47
RAD23A-204ENST00000588329 GPR162Q16538 588 aa24.24■■□□□ 1.47
RAD23A-204ENST00000588329 MYBBP1AQ9BQG0 1328 aaKnown RBP24.24■■□□□ 1.47
RAD23A-204ENST00000588329 HMGB2P26583 209 aaKnown RBP24.23■■□□□ 1.47
RAD23A-204ENST00000588329 IFFO2Q5TF58 517 aa24.23■■□□□ 1.47
RAD23A-204ENST00000588329 LGR6Q9HBX8 967 aa24.23■■□□□ 1.47
RAD23A-204ENST00000588329 PLEKHG2Q9H7P9 1386 aa24.23■■□□□ 1.47
RAD23A-204ENST00000588329 MTHFSDQ2M296 383 aaKnown RBP24.21■■□□□ 1.47
RAD23A-204ENST00000588329 AKAP4Q5JQC9 854 aa24.2■■□□□ 1.46
RAD23A-204ENST00000588329 GOLGB1Q14789 3259 aaKnown RBP24.2■■□□□ 1.46
RAD23A-204ENST00000588329 MAP3K5Q99683 1374 aa24.19■■□□□ 1.46
RAD23A-204ENST00000588329 SSFA2P28290 1259 aa24.19■■□□□ 1.46
RAD23A-204ENST00000588329 UBR3Q6ZT12 1888 aa24.18■■□□□ 1.46
RAD23A-204ENST00000588329 PPP2R1AP30153 589 aa24.17■■□□□ 1.46
RAD23A-204ENST00000588329 WWC3Q9ULE0 1092 aa24.17■■□□□ 1.46
RAD23A-204ENST00000588329 RTCBQ9Y3I0 505 aaKnown RBP24.17■■□□□ 1.46
RAD23A-204ENST00000588329 COL24A1Q17RW2 1714 aa24.16■■□□□ 1.46
RAD23A-204ENST00000588329 SLC39A6Q13433 755 aa24.16■■□□□ 1.46
RAD23A-204ENST00000588329 COL3A1P02461 1466 aaPredicted RBP24.15■■□□□ 1.46
RAD23A-204ENST00000588329 RNMTO43148 476 aaKnown RBP24.15■■□□□ 1.46
RAD23A-204ENST00000588329 TRAPPC3LQ5T215 181 aa24.15■■□□□ 1.46
RAD23A-204ENST00000588329 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
RAD23A-204ENST00000588329 SLC52A2Q9HAB3 445 aa24.14■■□□□ 1.45
RAD23A-204ENST00000588329 GIGYF1O75420 1035 aaPredicted RBP24.13■■□□□ 1.45
RAD23A-204ENST00000588329 ARHGEF1Q92888 912 aaKnown RBP24.12■■□□□ 1.45
RAD23A-204ENST00000588329 YBX3P16989 372 aaKnown RBP eCLIP24.1■■□□□ 1.458e-12■■■□□ 14.6
RAD23A-204ENST00000588329 RFC4P35249 363 aa24.1■■□□□ 1.45
RAD23A-204ENST00000588329 CRKLP46109 303 aaKnown RBP24.1■■□□□ 1.45
RAD23A-204ENST00000588329 DNAJC10Q8IXB1 793 aa24.1■■□□□ 1.45
RAD23A-204ENST00000588329 SCN11AQ9UI33 1791 aa24.1■■□□□ 1.45
RAD23A-204ENST00000588329 CNTNAP4Q9C0A0 1308 aa24.1■■□□□ 1.45
RAD23A-204ENST00000588329 CCER2I3L3R5 266 aa24.09■■□□□ 1.45
RAD23A-204ENST00000588329 RPS6KA4O75676 772 aa24.09■■□□□ 1.45
RAD23A-204ENST00000588329 MMP10P09238 476 aa24.09■■□□□ 1.45
RAD23A-204ENST00000588329 RC3H1Q5TC82 1133 aaKnown RBP24.09■■□□□ 1.45
RAD23A-204ENST00000588329 PRKAR2BP31323 418 aa24.08■■□□□ 1.45
RAD23A-204ENST00000588329 PHACTR3Q96KR7 559 aa24.08■■□□□ 1.45
RAD23A-204ENST00000588329 CD2APQ9Y5K6 639 aa24.08■■□□□ 1.45
RAD23A-204ENST00000588329 U2AF1L5P0DN76 240 aaPredicted RBP24.07■■□□□ 1.44
RAD23A-204ENST00000588329 U2AF1Q01081 240 aaKnown RBP eCLIP24.07■■□□□ 1.44
RAD23A-204ENST00000588329 MIER1Q8N108 512 aa24.06■■□□□ 1.44
RAD23A-204ENST00000588329 SRP68Q9UHB9 627 aaKnown RBP24.06■■□□□ 1.44
RAD23A-204ENST00000588329 COL5A3P25940 1745 aaPredicted RBP24.05■■□□□ 1.44
RAD23A-204ENST00000588329 GAS2L2Q8NHY3 880 aa24.05■■□□□ 1.44
RAD23A-204ENST00000588329 NUDCQ9Y266 331 aa24.05■■□□□ 1.44
RAD23A-204ENST00000588329 MYH14Q7Z406 1995 aaKnown RBP24.04■■□□□ 1.44
RAD23A-204ENST00000588329 GNAT3A8MTJ3 354 aa24.04■■□□□ 1.44
RAD23A-204ENST00000588329 IL17REQ8NFR9 667 aa24.04■■□□□ 1.44
RAD23A-204ENST00000588329 RSPH6AQ9H0K4 717 aa24.04■■□□□ 1.44
RAD23A-204ENST00000588329 MRS2Q9HD23 443 aa24.04■■□□□ 1.44
RAD23A-204ENST00000588329 GYS1P13807 737 aa24.03■■□□□ 1.44
RAD23A-204ENST00000588329 TEFQ10587 303 aa24.03■■□□□ 1.44
RAD23A-204ENST00000588329 INTS5Q6P9B9 1019 aaKnown RBP24.03■■□□□ 1.44
RAD23A-204ENST00000588329 NLGN1Q8N2Q7 840 aa24.03■■□□□ 1.44
RAD23A-204ENST00000588329 ADRA2BP18089 450 aa24.02■■□□□ 1.44
RAD23A-204ENST00000588329 TJP1Q07157 1748 aa24.01■■□□□ 1.43
RAD23A-204ENST00000588329 TTC5Q8N0Z6 440 aa24.01■■□□□ 1.43
RAD23A-204ENST00000588329 CCDC87Q9NVE4 849 aa24.01■■□□□ 1.43
RAD23A-204ENST00000588329 ZNF831Q5JPB2 1677 aa24.01■■□□□ 1.43
RAD23A-204ENST00000588329 VIRMAQ69YN4 1812 aaKnown RBP24■■□□□ 1.43
RAD23A-204ENST00000588329 MRC1P22897 1456 aa24■■□□□ 1.43
RAD23A-204ENST00000588329 CEP350Q5VT06 3117 aa24■■□□□ 1.43
RAD23A-204ENST00000588329 GRIN3BO60391 1043 aa23.99■■□□□ 1.43
RAD23A-204ENST00000588329 CYP19A1P11511 503 aaPredicted RBP23.99■■□□□ 1.43
RAD23A-204ENST00000588329 FKBP8Q14318 412 aa23.99■■□□□ 1.43
RAD23A-204ENST00000588329 ZBTB1Q9Y2K1 713 aa23.98■■□□□ 1.43
RAD23A-204ENST00000588329 PARP3Q9Y6F1 533 aa23.98■■□□□ 1.43
RAD23A-204ENST00000588329 CICQ96RK0 1608 aaPredicted RBP23.98■■□□□ 1.43
RAD23A-204ENST00000588329 CANXP27824 592 aaKnown RBP23.97■■□□□ 1.43
RAD23A-204ENST00000588329 KCPQ6ZWJ8 1503 aa23.97■■□□□ 1.43
RAD23A-204ENST00000588329 USP42Q9H9J4 1324 aaKnown RBP23.96■■□□□ 1.43
RAD23A-204ENST00000588329 KCNQ3O43525 872 aa23.96■■□□□ 1.43
RAD23A-204ENST00000588329 WDR43Q15061 677 aaKnown RBP eCLIP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms