RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 WWC3Q9ULE0 1092 aa23.08■■□□□ 1.29
LINC01842-201ENST00000588275 IGSF1Q8N6C5 1336 aa23.07■■□□□ 1.28
LINC01842-201ENST00000588275 ATG3Q9NT62 314 aa23.06■■□□□ 1.28
LINC01842-201ENST00000588275 RBM42Q9BTD8 480 aaKnown RBP23.04■■□□□ 1.28
LINC01842-201ENST00000588275 PLEKHO1Q53GL0 409 aaPredicted RBP23.03■■□□□ 1.28
LINC01842-201ENST00000588275 MORC1Q86VD1 984 aa23.03■■□□□ 1.28
LINC01842-201ENST00000588275 CCER1Q8TC90 406 aaPredicted RBP23.03■■□□□ 1.28
LINC01842-201ENST00000588275 ZNF530Q6P9A1 599 aaPredicted RBP23.02■■□□□ 1.28
LINC01842-201ENST00000588275 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
LINC01842-201ENST00000588275 HSP90AB1P08238 724 aaKnown RBP23.01■■□□□ 1.27
LINC01842-201ENST00000588275 KDRP35968 1356 aa23.01■■□□□ 1.27
LINC01842-201ENST00000588275 ATP10DQ9P241 1426 aa23■■□□□ 1.27
LINC01842-201ENST00000588275 DCAF5Q96JK2 942 aa23■■□□□ 1.27
LINC01842-201ENST00000588275 ERVV-2B6SEH9 535 aa22.99■■□□□ 1.27
LINC01842-201ENST00000588275 AEBP1Q8IUX7 1158 aa22.99■■□□□ 1.27
LINC01842-201ENST00000588275 RTCBQ9Y3I0 505 aaKnown RBP22.99■■□□□ 1.27
LINC01842-201ENST00000588275 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
LINC01842-201ENST00000588275 CABP4P57796 275 aa22.98■■□□□ 1.27
LINC01842-201ENST00000588275 MMP10P09238 476 aa22.97■■□□□ 1.27
LINC01842-201ENST00000588275 AMOTQ4VCS5 1084 aa22.97■■□□□ 1.27
LINC01842-201ENST00000588275 C1orf141Q5JVX7 400 aa22.97■■□□□ 1.27
LINC01842-201ENST00000588275 TRAPPC3LQ5T215 181 aa22.97■■□□□ 1.27
LINC01842-201ENST00000588275 SLC4A9Q96Q91 983 aa22.97■■□□□ 1.27
LINC01842-201ENST00000588275 KNSTRNQ9Y448 316 aa22.97■■□□□ 1.27
LINC01842-201ENST00000588275 COL5A3P25940 1745 aaPredicted RBP22.96■■□□□ 1.27
LINC01842-201ENST00000588275 MTHFSP49914 203 aa22.95■■□□□ 1.26
LINC01842-201ENST00000588275 SULT6B1Q6IMI4 303 aa22.95■■□□□ 1.26
LINC01842-201ENST00000588275 ZNF526Q8TF50 670 aaPredicted RBP22.95■■□□□ 1.26
LINC01842-201ENST00000588275 CICQ96RK0 1608 aaPredicted RBP22.95■■□□□ 1.26
LINC01842-201ENST00000588275 ZNF831Q5JPB2 1677 aa22.94■■□□□ 1.26
LINC01842-201ENST00000588275 PTCD1O75127 700 aaKnown RBP22.93■■□□□ 1.26
LINC01842-201ENST00000588275 GPBP1L1Q9HC44 474 aaPredicted RBP22.93■■□□□ 1.26
LINC01842-201ENST00000588275 ARHGEF1Q92888 912 aaKnown RBP22.92■■□□□ 1.26
LINC01842-201ENST00000588275 CNTNAP4Q9C0A0 1308 aa22.91■■□□□ 1.26
LINC01842-201ENST00000588275 RFC4P35249 363 aa22.91■■□□□ 1.26
LINC01842-201ENST00000588275 N4BP2Q86UW6 1770 aaPredicted RBP22.91■■□□□ 1.26
LINC01842-201ENST00000588275 RC3H1Q5TC82 1133 aaKnown RBP22.9■■□□□ 1.26
LINC01842-201ENST00000588275 NLGN1Q8N2Q7 840 aa22.9■■□□□ 1.26
LINC01842-201ENST00000588275 NFATC2IPQ8NCF5 419 aa22.9■■□□□ 1.26
LINC01842-201ENST00000588275 C4AP0C0L4 1744 aa22.9■■□□□ 1.26
LINC01842-201ENST00000588275 ADCY9O60503 1353 aa22.89■■□□□ 1.26
LINC01842-201ENST00000588275 RPS6KA4O75676 772 aa22.89■■□□□ 1.25
LINC01842-201ENST00000588275 ADRA2BP18089 450 aa22.89■■□□□ 1.25
LINC01842-201ENST00000588275 PXDNLA1KZ92 1463 aa22.89■■□□□ 1.25
LINC01842-201ENST00000588275 KIF13BQ9NQT8 1826 aa22.89■■□□□ 1.25
LINC01842-201ENST00000588275 MYH14Q7Z406 1995 aaKnown RBP22.89■■□□□ 1.25
LINC01842-201ENST00000588275 IL13P35225 146 aa22.88■■□□□ 1.25
LINC01842-201ENST00000588275 SCN11AQ9UI33 1791 aa22.87■■□□□ 1.25
LINC01842-201ENST00000588275 GYS1P13807 737 aa22.87■■□□□ 1.25
LINC01842-201ENST00000588275 CCDC87Q9NVE4 849 aa22.87■■□□□ 1.25
LINC01842-201ENST00000588275 C10orf71Q711Q0 1435 aa22.87■■□□□ 1.25
LINC01842-201ENST00000588275 KIAA1551Q9HCM1 1747 aa22.87■■□□□ 1.25
LINC01842-201ENST00000588275 BCS1LQ9Y276 419 aa22.86■■□□□ 1.25
LINC01842-201ENST00000588275 PARP3Q9Y6F1 533 aa22.86■■□□□ 1.25
LINC01842-201ENST00000588275 TJP1Q07157 1748 aa22.85■■□□□ 1.25
LINC01842-201ENST00000588275 KIF7Q2M1P5 1343 aa22.85■■□□□ 1.25
LINC01842-201ENST00000588275 A0A0G2JLW4 131 aa22.85■■□□□ 1.25
LINC01842-201ENST00000588275 CRKLP46109 303 aaKnown RBP22.85■■□□□ 1.25
LINC01842-201ENST00000588275 AMER1Q5JTC6 1135 aaPredicted RBP22.85■■□□□ 1.25
LINC01842-201ENST00000588275 HMOX1P09601 288 aa22.84■■□□□ 1.25
LINC01842-201ENST00000588275 TGFB2P61812 414 aa22.84■■□□□ 1.25
LINC01842-201ENST00000588275 SRP68Q9UHB9 627 aaKnown RBP22.83■■□□□ 1.25
LINC01842-201ENST00000588275 AKAP4Q5JQC9 854 aa22.82■■□□□ 1.24
LINC01842-201ENST00000588275 VIRMAQ69YN4 1812 aaKnown RBP22.81■■□□□ 1.24
LINC01842-201ENST00000588275 DPEP1P16444 411 aa22.81■■□□□ 1.24
LINC01842-201ENST00000588275 CC2D1BQ5T0F9 858 aaKnown RBP22.81■■□□□ 1.24
LINC01842-201ENST00000588275 FCHSD2O94868 740 aa22.8■■□□□ 1.24
LINC01842-201ENST00000588275 CNGB1Q14028 1251 aaPredicted RBP22.8■■□□□ 1.24
LINC01842-201ENST00000588275 ARHGAP27Q6ZUM4 889 aa22.79■■□□□ 1.24
LINC01842-201ENST00000588275 SLC52A2Q9HAB3 445 aa22.79■■□□□ 1.24
LINC01842-201ENST00000588275 LGR6Q9HBX8 967 aa22.79■■□□□ 1.24
LINC01842-201ENST00000588275 USP42Q9H9J4 1324 aaKnown RBP22.79■■□□□ 1.24
LINC01842-201ENST00000588275 FKBP8Q14318 412 aa22.78■■□□□ 1.24
LINC01842-201ENST00000588275 DNAJC10Q8IXB1 793 aa22.78■■□□□ 1.24
LINC01842-201ENST00000588275 SLC39A6Q13433 755 aa22.77■■□□□ 1.24
LINC01842-201ENST00000588275 BRCA1P38398 1863 aaKnown RBP22.77■■□□□ 1.24
LINC01842-201ENST00000588275 RNMTO43148 476 aaKnown RBP22.76■■□□□ 1.23
LINC01842-201ENST00000588275 DIAPH1O60610 1272 aaKnown RBP22.76■■□□□ 1.23
LINC01842-201ENST00000588275 INTS5Q6P9B9 1019 aaKnown RBP22.76■■□□□ 1.23
LINC01842-201ENST00000588275 CEP350Q5VT06 3117 aa22.76■■□□□ 1.23
LINC01842-201ENST00000588275 MRC1P22897 1456 aa22.75■■□□□ 1.23
LINC01842-201ENST00000588275 DDR1Q08345 913 aa22.75■■□□□ 1.23
LINC01842-201ENST00000588275 ZPR1O75312 459 aa22.74■■□□□ 1.23
LINC01842-201ENST00000588275 MTHFSDQ2M296 383 aaKnown RBP22.74■■□□□ 1.23
LINC01842-201ENST00000588275 HSPA6P17066 643 aa22.73■■□□□ 1.23
LINC01842-201ENST00000588275 USPL1Q5W0Q7 1092 aa22.73■■□□□ 1.23
LINC01842-201ENST00000588275 ADAMTS7Q9UKP4 1686 aa22.72■■□□□ 1.23
LINC01842-201ENST00000588275 KIF3CO14782 793 aa22.72■■□□□ 1.23
LINC01842-201ENST00000588275 PIM2Q9P1W9 311 aa22.72■■□□□ 1.23
LINC01842-201ENST00000588275 ARFGEF1Q9Y6D6 1849 aa22.72■■□□□ 1.23
LINC01842-201ENST00000588275 KCPQ6ZWJ8 1503 aa22.72■■□□□ 1.23
LINC01842-201ENST00000588275 PER1O15534 1290 aaPredicted RBP22.71■■□□□ 1.23
LINC01842-201ENST00000588275 KCNA3P22001 575 aa22.71■■□□□ 1.23
LINC01842-201ENST00000588275 SOS1Q07889 1333 aaPredicted RBP22.71■■□□□ 1.23
LINC01842-201ENST00000588275 U2SURPO15042 1029 aaKnown RBP22.7■■□□□ 1.22
LINC01842-201ENST00000588275 CYP19A1P11511 503 aaPredicted RBP22.7■■□□□ 1.22
LINC01842-201ENST00000588275 CHRNA5P30532 468 aa22.7■■□□□ 1.22
LINC01842-201ENST00000588275 DALRD3Q5D0E6 543 aaKnown RBP22.7■■□□□ 1.22
LINC01842-201ENST00000588275 ZBTB1Q9Y2K1 713 aa22.7■■□□□ 1.22
LINC01842-201ENST00000588275 COL15A1P39059 1388 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms