RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PPM1GO15355 546 aaPredicted RBP19.19■□□□□ 0.66
CLPTM1-208ENST00000588274 EIF4A2Q14240 407 aaKnown RBP19.19■□□□□ 0.66
CLPTM1-208ENST00000588274 C10orf71Q711Q0 1435 aa19.18■□□□□ 0.66
CLPTM1-208ENST00000588274 C4AP0C0L4 1744 aa19.18■□□□□ 0.66
CLPTM1-208ENST00000588274 TMOD3Q9NYL9 352 aa19.18■□□□□ 0.66
CLPTM1-208ENST00000588274 WWC3Q9ULE0 1092 aa19.18■□□□□ 0.66
CLPTM1-208ENST00000588274 GNPATO15228 680 aa19.17■□□□□ 0.66
CLPTM1-208ENST00000588274 IFNL2Q8IZJ0 200 aa19.17■□□□□ 0.66
CLPTM1-208ENST00000588274 BRCA1P38398 1863 aaKnown RBP19.16■□□□□ 0.66
CLPTM1-208ENST00000588274 N4BP2Q86UW6 1770 aaPredicted RBP19.15■□□□□ 0.66
CLPTM1-208ENST00000588274 GPBP1L1Q9HC44 474 aaPredicted RBP19.15■□□□□ 0.66
CLPTM1-208ENST00000588274 ATP6V1AP38606 617 aa19.14■□□□□ 0.65
CLPTM1-208ENST00000588274 MYH14Q7Z406 1995 aaKnown RBP19.13■□□□□ 0.65
CLPTM1-208ENST00000588274 KIF3CO14782 793 aa19.13■□□□□ 0.65
CLPTM1-208ENST00000588274 MMP10P09238 476 aa19.13■□□□□ 0.65
CLPTM1-208ENST00000588274 ADAMTS7Q9UKP4 1686 aa19.13■□□□□ 0.65
CLPTM1-208ENST00000588274 TJP1Q07157 1748 aa19.12■□□□□ 0.65
CLPTM1-208ENST00000588274 ZNF526Q8TF50 670 aaPredicted RBP19.12■□□□□ 0.65
CLPTM1-208ENST00000588274 CNTNAP4Q9C0A0 1308 aa19.11■□□□□ 0.65
CLPTM1-208ENST00000588274 HSPA6P17066 643 aa19.11■□□□□ 0.65
CLPTM1-208ENST00000588274 TIMELESSQ9UNS1 1208 aa19.11■□□□□ 0.65
CLPTM1-208ENST00000588274 ERVV-2B6SEH9 535 aa19.09■□□□□ 0.65
CLPTM1-208ENST00000588274 GYS1P13807 737 aa19.09■□□□□ 0.65
CLPTM1-208ENST00000588274 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
CLPTM1-208ENST00000588274 TRIM26Q12899 539 aaPredicted RBP19.09■□□□□ 0.65
CLPTM1-208ENST00000588274 IFFO2Q5TF58 517 aa19.08■□□□□ 0.64
CLPTM1-208ENST00000588274 ARHGEF1Q92888 912 aaKnown RBP19.08■□□□□ 0.64
CLPTM1-208ENST00000588274 DCAF5Q96JK2 942 aa19.08■□□□□ 0.64
CLPTM1-208ENST00000588274 RC3H1Q5TC82 1133 aaKnown RBP19.07■□□□□ 0.64
CLPTM1-208ENST00000588274 AEBP1Q8IUX7 1158 aa19.07■□□□□ 0.64
CLPTM1-208ENST00000588274 ADRA2BP18089 450 aa19.06■□□□□ 0.64
CLPTM1-208ENST00000588274 RTCBQ9Y3I0 505 aaKnown RBP19.06■□□□□ 0.64
CLPTM1-208ENST00000588274 ARFGEF1Q9Y6D6 1849 aa19.06■□□□□ 0.64
CLPTM1-208ENST00000588274 A0A0G2JLW4 131 aa19.05■□□□□ 0.64
CLPTM1-208ENST00000588274 KCNA3P22001 575 aa19.05■□□□□ 0.64
CLPTM1-208ENST00000588274 TGFB2P61812 414 aa19.05■□□□□ 0.64
CLPTM1-208ENST00000588274 TRAPPC3LQ5T215 181 aa19.05■□□□□ 0.64
CLPTM1-208ENST00000588274 MRC1P22897 1456 aa19.04■□□□□ 0.64
CLPTM1-208ENST00000588274 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
CLPTM1-208ENST00000588274 RPS6KA4O75676 772 aa19.04■□□□□ 0.64
CLPTM1-208ENST00000588274 NLGN1Q8N2Q7 840 aa19.04■□□□□ 0.64
CLPTM1-208ENST00000588274 CLSPNQ9HAW4 1339 aa19.03■□□□□ 0.64
CLPTM1-208ENST00000588274 DPEP1P16444 411 aa19.03■□□□□ 0.64
CLPTM1-208ENST00000588274 ZNF530Q6P9A1 599 aaPredicted RBP19.03■□□□□ 0.64
CLPTM1-208ENST00000588274 RBM42Q9BTD8 480 aaKnown RBP19.03■□□□□ 0.64
CLPTM1-208ENST00000588274 HSP90AB1P08238 724 aaKnown RBP19.02■□□□□ 0.64
CLPTM1-208ENST00000588274 PANK3Q9H999 370 aa19.02■□□□□ 0.64
CLPTM1-208ENST00000588274 DDR1Q08345 913 aa19.01■□□□□ 0.63
CLPTM1-208ENST00000588274 PLEKHO1Q53GL0 409 aaPredicted RBP19.01■□□□□ 0.63
CLPTM1-208ENST00000588274 BCS1LQ9Y276 419 aa19.01■□□□□ 0.63
CLPTM1-208ENST00000588274 USP42Q9H9J4 1324 aaKnown RBP19■□□□□ 0.63
CLPTM1-208ENST00000588274 HSPA5P11021 654 aaKnown RBP19■□□□□ 0.63
CLPTM1-208ENST00000588274 AMOTQ4VCS5 1084 aa19■□□□□ 0.63
CLPTM1-208ENST00000588274 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
CLPTM1-208ENST00000588274 SRP68Q9UHB9 627 aaKnown RBP18.99■□□□□ 0.63
CLPTM1-208ENST00000588274 KCPQ6ZWJ8 1503 aa18.99■□□□□ 0.63
CLPTM1-208ENST00000588274 NRXN2Q9P2S2 1712 aa18.98■□□□□ 0.63
CLPTM1-208ENST00000588274 IL13P35225 146 aa18.98■□□□□ 0.63
CLPTM1-208ENST00000588274 CABP4P57796 275 aa18.98■□□□□ 0.63
CLPTM1-208ENST00000588274 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
CLPTM1-208ENST00000588274 CCDC87Q9NVE4 849 aa18.98■□□□□ 0.63
CLPTM1-208ENST00000588274 PTCD1O75127 700 aaKnown RBP18.97■□□□□ 0.63
CLPTM1-208ENST00000588274 RFC4P35249 363 aa18.97■□□□□ 0.63
CLPTM1-208ENST00000588274 FKBP8Q14318 412 aa18.97■□□□□ 0.63
CLPTM1-208ENST00000588274 INTS5Q6P9B9 1019 aaKnown RBP18.97■□□□□ 0.63
CLPTM1-208ENST00000588274 NFATC2IPQ8NCF5 419 aa18.97■□□□□ 0.63
CLPTM1-208ENST00000588274 NMRK2Q9NPI5 230 aa18.97■□□□□ 0.63
CLPTM1-208ENST00000588274 MTHFSP49914 203 aa18.96■□□□□ 0.63
CLPTM1-208ENST00000588274 WDR90Q96KV7 1748 aa18.95■□□□□ 0.62
CLPTM1-208ENST00000588274 EIF4G2P78344 907 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLPTM1-208ENST00000588274 SULT6B1Q6IMI4 303 aa18.95■□□□□ 0.62
CLPTM1-208ENST00000588274 DNAJC5GQ8N7S2 189 aa18.95■□□□□ 0.62
CLPTM1-208ENST00000588274 PARP3Q9Y6F1 533 aa18.95■□□□□ 0.62
CLPTM1-208ENST00000588274 UBR2Q8IWV8 1755 aa18.95■□□□□ 0.62
CLPTM1-208ENST00000588274 VIRMAQ69YN4 1812 aaKnown RBP18.95■□□□□ 0.62
CLPTM1-208ENST00000588274 DLEC1Q9Y238 1755 aa18.94■□□□□ 0.62
CLPTM1-208ENST00000588274 POLRMTO00411 1230 aaKnown RBP18.94■□□□□ 0.62
CLPTM1-208ENST00000588274 TOMM70O94826 608 aa18.94■□□□□ 0.62
CLPTM1-208ENST00000588274 FCHSD2O94868 740 aa18.94■□□□□ 0.62
CLPTM1-208ENST00000588274 AMER1Q5JTC6 1135 aaPredicted RBP18.93■□□□□ 0.62
CLPTM1-208ENST00000588274 C1orf141Q5JVX7 400 aa18.93■□□□□ 0.62
CLPTM1-208ENST00000588274 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
CLPTM1-208ENST00000588274 SOS1Q07889 1333 aaPredicted RBP18.93■□□□□ 0.62
CLPTM1-208ENST00000588274 AFDNP55196 1824 aaKnown RBP18.93■□□□□ 0.62
CLPTM1-208ENST00000588274 SBF1O95248 1867 aa18.92■□□□□ 0.62
CLPTM1-208ENST00000588274 TM4SF1P30408 202 aa18.92■□□□□ 0.62
CLPTM1-208ENST00000588274 C9orf131Q5VYM1 1079 aa18.92■□□□□ 0.62
CLPTM1-208ENST00000588274 MORC1Q86VD1 984 aa18.92■□□□□ 0.62
CLPTM1-208ENST00000588274 APLP1P51693 650 aa18.91■□□□□ 0.62
CLPTM1-208ENST00000588274 DNAJC10Q8IXB1 793 aa18.91■□□□□ 0.62
CLPTM1-208ENST00000588274 SLC52A2Q9HAB3 445 aa18.91■□□□□ 0.62
CLPTM1-208ENST00000588274 TNRC6CQ9HCJ0 1690 aaKnown RBP18.91■□□□□ 0.62
CLPTM1-208ENST00000588274 CHRNA5P30532 468 aa18.9■□□□□ 0.62
CLPTM1-208ENST00000588274 AKAP4Q5JQC9 854 aa18.9■□□□□ 0.62
CLPTM1-208ENST00000588274 LGR6Q9HBX8 967 aa18.9■□□□□ 0.62
CLPTM1-208ENST00000588274 PIM2Q9P1W9 311 aa18.9■□□□□ 0.62
CLPTM1-208ENST00000588274 PCNTO95613 3336 aa18.89■□□□□ 0.62
CLPTM1-208ENST00000588274 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
CLPTM1-208ENST00000588274 CYP19A1P11511 503 aaPredicted RBP18.88■□□□□ 0.61
CLPTM1-208ENST00000588274 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms