RNA–Protein interactions for RNA: ENST00000588118.5

DNMT1-214, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-214ENST00000588118 WNK3Q9BYP7 1800 aa17.52■□□□□ 0.4
DNMT1-214ENST00000588118 IPO8O15397 1037 aaKnown RBP17.52■□□□□ 0.4
DNMT1-214ENST00000588118 TSPYL6Q8N831 410 aa17.52■□□□□ 0.4
DNMT1-214ENST00000588118 SLC52A2Q9HAB3 445 aa17.52■□□□□ 0.4
DNMT1-214ENST00000588118 MIS18AQ9NYP9 233 aa17.52■□□□□ 0.4
DNMT1-214ENST00000588118 VIRMAQ69YN4 1812 aaKnown RBP17.51■□□□□ 0.39
DNMT1-214ENST00000588118 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
DNMT1-214ENST00000588118 EXOC5O00471 708 aa17.51■□□□□ 0.39
DNMT1-214ENST00000588118 PLIN1O60240 522 aa17.51■□□□□ 0.39
DNMT1-214ENST00000588118 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.51■□□□□ 0.39
DNMT1-214ENST00000588118 CCDC9Q9Y3X0 531 aaKnown RBP17.51■□□□□ 0.39
DNMT1-214ENST00000588118 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
DNMT1-214ENST00000588118 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
DNMT1-214ENST00000588118 SHANK3Q9BYB0 1731 aa17.5■□□□□ 0.39
DNMT1-214ENST00000588118 TNS2Q63HR2 1409 aa17.5■□□□□ 0.39
DNMT1-214ENST00000588118 ERVV-2B6SEH9 535 aa17.5■□□□□ 0.39
DNMT1-214ENST00000588118 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
DNMT1-214ENST00000588118 HOXB7P09629 217 aa17.5■□□□□ 0.39
DNMT1-214ENST00000588118 ZKSCAN2Q63HK3 967 aa17.5■□□□□ 0.39
DNMT1-214ENST00000588118 DDX54Q8TDD1 881 aaKnown RBP17.49■□□□□ 0.39
DNMT1-214ENST00000588118 FRAT1Q92837 279 aaPredicted RBP17.49■□□□□ 0.39
DNMT1-214ENST00000588118 BCL2L13Q9BXK5 485 aa17.49■□□□□ 0.39
DNMT1-214ENST00000588118 USP21Q9UK80 565 aa17.49■□□□□ 0.39
DNMT1-214ENST00000588118 CABP4P57796 275 aa17.48■□□□□ 0.39
DNMT1-214ENST00000588118 EIF4A1P60842 406 aaKnown RBP17.48■□□□□ 0.39
DNMT1-214ENST00000588118 MRPL50Q8N5N7 158 aaKnown RBP17.48■□□□□ 0.39
DNMT1-214ENST00000588118 PPP4R2Q9NY27 417 aa17.48■□□□□ 0.39
DNMT1-214ENST00000588118 KRT24Q2M2I5 525 aa17.47■□□□□ 0.39
DNMT1-214ENST00000588118 CCDC30Q5VVM6 783 aa17.47■□□□□ 0.39
DNMT1-214ENST00000588118 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
DNMT1-214ENST00000588118 NFATC2IPQ8NCF5 419 aa17.46■□□□□ 0.39
DNMT1-214ENST00000588118 DDB1Q16531 1140 aa17.45■□□□□ 0.38
DNMT1-214ENST00000588118 ATF7IPQ6VMQ6 1270 aa17.45■□□□□ 0.38
DNMT1-214ENST00000588118 CRBNQ96SW2 442 aa17.45■□□□□ 0.38
DNMT1-214ENST00000588118 STK31Q9BXU1 1019 aa17.45■□□□□ 0.38
DNMT1-214ENST00000588118 NOB1Q9ULX3 412 aaKnown RBP17.45■□□□□ 0.38
DNMT1-214ENST00000588118 ZNF790Q6PG37 636 aa17.44■□□□□ 0.38
DNMT1-214ENST00000588118 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
DNMT1-214ENST00000588118 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
DNMT1-214ENST00000588118 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
DNMT1-214ENST00000588118 AAMPQ13685 434 aa17.43■□□□□ 0.38
DNMT1-214ENST00000588118 C20orf194Q5TEA3 1177 aa17.43■□□□□ 0.38
DNMT1-214ENST00000588118 FTSJ3Q8IY81 847 aaKnown RBP17.43■□□□□ 0.38
DNMT1-214ENST00000588118 EXOC6Q8TAG9 804 aa17.43■□□□□ 0.38
DNMT1-214ENST00000588118 API5Q9BZZ5 524 aaKnown RBP17.43■□□□□ 0.38
DNMT1-214ENST00000588118 AFF2P51816 1311 aa17.43■□□□□ 0.38
DNMT1-214ENST00000588118 KCNQ3O43525 872 aa17.42■□□□□ 0.38
DNMT1-214ENST00000588118 TRPC5Q9UL62 973 aaPredicted RBP17.42■□□□□ 0.38
DNMT1-214ENST00000588118 PTPRCP08575 1304 aa17.42■□□□□ 0.38
DNMT1-214ENST00000588118 TRIM27P14373 513 aa17.41■□□□□ 0.38
DNMT1-214ENST00000588118 HDGFL1Q5TGJ6 251 aa17.41■□□□□ 0.38
DNMT1-214ENST00000588118 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
DNMT1-214ENST00000588118 ATRNO75882 1429 aa17.4■□□□□ 0.38
DNMT1-214ENST00000588118 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
DNMT1-214ENST00000588118 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
DNMT1-214ENST00000588118 CACNA1FO60840 1977 aa17.39■□□□□ 0.37
DNMT1-214ENST00000588118 TCERG1O14776 1098 aaKnown RBP17.39■□□□□ 0.37
DNMT1-214ENST00000588118 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
DNMT1-214ENST00000588118 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
DNMT1-214ENST00000588118 FAM98CQ17RN3 349 aaKnown RBP17.39■□□□□ 0.37
DNMT1-214ENST00000588118 GJD4Q96KN9 370 aaPredicted RBP17.39■□□□□ 0.37
DNMT1-214ENST00000588118 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
DNMT1-214ENST00000588118 SNRPA1P09661 255 aaKnown RBP17.38■□□□□ 0.37
DNMT1-214ENST00000588118 MVPQ14764 893 aaKnown RBP17.38■□□□□ 0.37
DNMT1-214ENST00000588118 PANK1Q8TE04 598 aa17.38■□□□□ 0.37
DNMT1-214ENST00000588118 TOGARAM1Q9Y4F4 1720 aa17.38■□□□□ 0.37
DNMT1-214ENST00000588118 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
DNMT1-214ENST00000588118 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
DNMT1-214ENST00000588118 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-214ENST00000588118 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
DNMT1-214ENST00000588118 RLBP1P12271 317 aa17.36■□□□□ 0.37
DNMT1-214ENST00000588118 EIF2S2P20042 333 aaKnown RBP17.36■□□□□ 0.37
DNMT1-214ENST00000588118 FBXO41Q8TF61 875 aa17.36■□□□□ 0.37
DNMT1-214ENST00000588118 CCDC136Q96JN2 1154 aa17.36■□□□□ 0.37
DNMT1-214ENST00000588118 DBF4Q9UBU7 674 aaPredicted RBP17.36■□□□□ 0.37
DNMT1-214ENST00000588118 DDX19BQ9UMR2 479 aa17.36■□□□□ 0.37
DNMT1-214ENST00000588118 ABCC4O15439 1325 aa17.36■□□□□ 0.37
DNMT1-214ENST00000588118 THSD7AQ9UPZ6 1657 aa17.36■□□□□ 0.37
DNMT1-214ENST00000588118 MARCH10Q8NA82 808 aaPredicted RBP17.35■□□□□ 0.37
DNMT1-214ENST00000588118 GLI3P10071 1580 aa17.35■□□□□ 0.37
DNMT1-214ENST00000588118 BCL9O00512 1426 aa17.34■□□□□ 0.37
DNMT1-214ENST00000588118 ONECUT3O60422 494 aaPredicted RBP17.34■□□□□ 0.37
DNMT1-214ENST00000588118 FLIIQ13045 1269 aa17.34■□□□□ 0.37
DNMT1-214ENST00000588118 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
DNMT1-214ENST00000588118 PIGBQ92521 554 aa17.34■□□□□ 0.37
DNMT1-214ENST00000588118 TNNQ9UQP3 1299 aa17.34■□□□□ 0.37
DNMT1-214ENST00000588118 ERBB4Q15303 1308 aa17.33■□□□□ 0.36
DNMT1-214ENST00000588118 A0A0G2JS52 829 aa17.33■□□□□ 0.36
DNMT1-214ENST00000588118 MYT1Q01538 1121 aa17.33■□□□□ 0.36
DNMT1-214ENST00000588118 ZNF772Q68DY9 489 aaPredicted RBP17.33■□□□□ 0.36
DNMT1-214ENST00000588118 ITPRIPQ8IWB1 547 aa17.33■□□□□ 0.36
DNMT1-214ENST00000588118 TMEM57Q8N5G2 664 aa17.33■□□□□ 0.36
DNMT1-214ENST00000588118 ITGB4P16144 1822 aa17.33■□□□□ 0.36
DNMT1-214ENST00000588118 KCPQ6ZWJ8 1503 aa17.32■□□□□ 0.36
DNMT1-214ENST00000588118 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
DNMT1-214ENST00000588118 NECTIN2Q92692 538 aa17.32■□□□□ 0.36
DNMT1-214ENST00000588118 TEX13AQ9BXU3 409 aaPredicted RBP17.32■□□□□ 0.36
DNMT1-214ENST00000588118 QTRT2Q9H974 415 aaKnown RBP17.32■□□□□ 0.36
DNMT1-214ENST00000588118 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
DNMT1-214ENST00000588118 HYPKQ9NX55 129 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms