RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 LINC00116Q8NCU8 138 aa25.64■■□□□ 1.7
TRIM47-205ENST00000587774 FLAD1Q8NFF5 587 aa25.64■■□□□ 1.7
TRIM47-205ENST00000587774 NLGN2Q8NFZ4 835 aa25.63■■□□□ 1.69
TRIM47-205ENST00000587774 ATG3Q9NT62 314 aa25.62■■□□□ 1.69
TRIM47-205ENST00000587774 ADAMTS7Q9UKP4 1686 aa25.61■■□□□ 1.69
TRIM47-205ENST00000587774 PHF14O94880 888 aa25.61■■□□□ 1.69
TRIM47-205ENST00000587774 ITPK1Q13572 414 aa25.61■■□□□ 1.69
TRIM47-205ENST00000587774 PLEKHO1Q53GL0 409 aaPredicted RBP25.61■■□□□ 1.69
TRIM47-205ENST00000587774 ZNF530Q6P9A1 599 aaPredicted RBP25.61■■□□□ 1.69
TRIM47-205ENST00000587774 SMIM5Q71RC9 77 aa25.6■■□□□ 1.69
TRIM47-205ENST00000587774 DCAF5Q96JK2 942 aa25.6■■□□□ 1.69
TRIM47-205ENST00000587774 KIAA1551Q9HCM1 1747 aa25.6■■□□□ 1.69
TRIM47-205ENST00000587774 ERVV-2B6SEH9 535 aa25.59■■□□□ 1.69
TRIM47-205ENST00000587774 HSP90AB1P08238 724 aaKnown RBP25.59■■□□□ 1.69
TRIM47-205ENST00000587774 IL13P35225 146 aa25.59■■□□□ 1.69
TRIM47-205ENST00000587774 ATP6V1AP38606 617 aa25.59■■□□□ 1.69
TRIM47-205ENST00000587774 GPR162Q16538 588 aa25.59■■□□□ 1.69
TRIM47-205ENST00000587774 AMOTQ4VCS5 1084 aa25.59■■□□□ 1.69
TRIM47-205ENST00000587774 SULT6B1Q6IMI4 303 aa25.59■■□□□ 1.69
TRIM47-205ENST00000587774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.58■■□□□ 1.69
TRIM47-205ENST00000587774 N4BP2Q86UW6 1770 aaPredicted RBP25.58■■□□□ 1.69
TRIM47-205ENST00000587774 SSFA2P28290 1259 aa25.57■■□□□ 1.68
TRIM47-205ENST00000587774 UBR2Q8IWV8 1755 aa25.56■■□□□ 1.68
TRIM47-205ENST00000587774 PER1O15534 1290 aaPredicted RBP25.56■■□□□ 1.68
TRIM47-205ENST00000587774 PELP1Q8IZL8 1130 aaKnown RBP25.56■■□□□ 1.68
TRIM47-205ENST00000587774 BRCA1P38398 1863 aaKnown RBP25.55■■□□□ 1.68
TRIM47-205ENST00000587774 SIPA1L3O60292 1781 aaPredicted RBP25.55■■□□□ 1.68
TRIM47-205ENST00000587774 GNPATO15228 680 aa25.55■■□□□ 1.68
TRIM47-205ENST00000587774 COL3A1P02461 1466 aaPredicted RBP25.54■■□□□ 1.68
TRIM47-205ENST00000587774 MRC1P22897 1456 aa25.54■■□□□ 1.68
TRIM47-205ENST00000587774 MTHFSP49914 203 aa25.54■■□□□ 1.68
TRIM47-205ENST00000587774 C1orf141Q5JVX7 400 aa25.54■■□□□ 1.68
TRIM47-205ENST00000587774 SLC4A9Q96Q91 983 aa25.54■■□□□ 1.68
TRIM47-205ENST00000587774 CC2D1BQ5T0F9 858 aaKnown RBP25.53■■□□□ 1.68
TRIM47-205ENST00000587774 ZNF784Q8NCA9 323 aaPredicted RBP25.53■■□□□ 1.68
TRIM47-205ENST00000587774 CABP4P57796 275 aa25.52■■□□□ 1.68
TRIM47-205ENST00000587774 RBM42Q9BTD8 480 aaKnown RBP25.51■■□□□ 1.67
TRIM47-205ENST00000587774 NPC1L1Q9UHC9 1359 aa25.49■■□□□ 1.67
TRIM47-205ENST00000587774 YBX3P16989 372 aaKnown RBP eCLIP25.49■■□□□ 1.67
TRIM47-205ENST00000587774 CD2APQ9Y5K6 639 aa25.49■■□□□ 1.67
TRIM47-205ENST00000587774 CNTNAP4Q9C0A0 1308 aa25.47■■□□□ 1.67
TRIM47-205ENST00000587774 HMOX1P09601 288 aa25.47■■□□□ 1.67
TRIM47-205ENST00000587774 NFATC2IPQ8NCF5 419 aa25.46■■□□□ 1.67
TRIM47-205ENST00000587774 AKAP4Q5JQC9 854 aa25.45■■□□□ 1.66
TRIM47-205ENST00000587774 RTCBQ9Y3I0 505 aaKnown RBP25.45■■□□□ 1.66
TRIM47-205ENST00000587774 AFDNP55196 1824 aaKnown RBP25.44■■□□□ 1.66
TRIM47-205ENST00000587774 KCPQ6ZWJ8 1503 aa25.44■■□□□ 1.66
TRIM47-205ENST00000587774 DIAPH1O60610 1272 aaKnown RBP25.44■■□□□ 1.66
TRIM47-205ENST00000587774 ARFGEF1Q9Y6D6 1849 aa25.44■■□□□ 1.66
TRIM47-205ENST00000587774 PTCD1O75127 700 aaKnown RBP25.43■■□□□ 1.66
TRIM47-205ENST00000587774 CNGB1Q14028 1251 aaPredicted RBP25.43■■□□□ 1.66
TRIM47-205ENST00000587774 RC3H1Q5TC82 1133 aaKnown RBP25.43■■□□□ 1.66
TRIM47-205ENST00000587774 TRAPPC3LQ5T215 181 aa25.41■■□□□ 1.66
TRIM47-205ENST00000587774 GRIN3BO60391 1043 aa25.4■■□□□ 1.66
TRIM47-205ENST00000587774 ADRA2BP18089 450 aa25.4■■□□□ 1.66
TRIM47-205ENST00000587774 MMP10P09238 476 aa25.39■■□□□ 1.66
TRIM47-205ENST00000587774 ARHGEF1Q92888 912 aaKnown RBP25.39■■□□□ 1.66
TRIM47-205ENST00000587774 SLC52A2Q9HAB3 445 aa25.39■■□□□ 1.66
TRIM47-205ENST00000587774 LGR6Q9HBX8 967 aa25.39■■□□□ 1.66
TRIM47-205ENST00000587774 DLG5Q8TDM6 1919 aa25.38■■□□□ 1.65
TRIM47-205ENST00000587774 RPS6KA4O75676 772 aa25.38■■□□□ 1.65
TRIM47-205ENST00000587774 MTHFSDQ2M296 383 aaKnown RBP25.38■■□□□ 1.65
TRIM47-205ENST00000587774 PXDNLA1KZ92 1463 aa25.38■■□□□ 1.65
TRIM47-205ENST00000587774 C10orf71Q711Q0 1435 aa25.37■■□□□ 1.65
TRIM47-205ENST00000587774 CRKLP46109 303 aaKnown RBP25.37■■□□□ 1.65
TRIM47-205ENST00000587774 RNMTO43148 476 aaKnown RBP25.36■■□□□ 1.65
TRIM47-205ENST00000587774 GYS1P13807 737 aa25.35■■□□□ 1.65
TRIM47-205ENST00000587774 RFC4P35249 363 aa25.35■■□□□ 1.65
TRIM47-205ENST00000587774 WWC3Q9ULE0 1092 aa25.35■■□□□ 1.65
TRIM47-205ENST00000587774 DLEC1Q9Y238 1755 aa25.34■■□□□ 1.65
TRIM47-205ENST00000587774 NLGN1Q8N2Q7 840 aa25.34■■□□□ 1.65
TRIM47-205ENST00000587774 NRXN2Q9P2S2 1712 aa25.33■■□□□ 1.65
TRIM47-205ENST00000587774 SCN7AQ01118 1682 aa25.32■■□□□ 1.64
TRIM47-205ENST00000587774 U2SURPO15042 1029 aaKnown RBP25.32■■□□□ 1.64
TRIM47-205ENST00000587774 SLC39A6Q13433 755 aa25.32■■□□□ 1.64
TRIM47-205ENST00000587774 DNAJC10Q8IXB1 793 aa25.3■■□□□ 1.64
TRIM47-205ENST00000587774 USP42Q9H9J4 1324 aaKnown RBP25.3■■□□□ 1.64
TRIM47-205ENST00000587774 INTS5Q6P9B9 1019 aaKnown RBP25.29■■□□□ 1.64
TRIM47-205ENST00000587774 SRP68Q9UHB9 627 aaKnown RBP25.29■■□□□ 1.64
TRIM47-205ENST00000587774 ADCY9O60503 1353 aa25.29■■□□□ 1.64
TRIM47-205ENST00000587774 ATP10DQ9P241 1426 aa25.29■■□□□ 1.64
TRIM47-205ENST00000587774 SBF1O95248 1867 aa25.28■■□□□ 1.64
TRIM47-205ENST00000587774 BCORQ6W2J9 1755 aa25.28■■□□□ 1.64
TRIM47-205ENST00000587774 CCDC87Q9NVE4 849 aa25.27■■□□□ 1.64
TRIM47-205ENST00000587774 PARP3Q9Y6F1 533 aa25.26■■□□□ 1.63
TRIM47-205ENST00000587774 SOS1Q07889 1333 aaPredicted RBP25.26■■□□□ 1.63
TRIM47-205ENST00000587774 CCDC88AQ3V6T2 1871 aa25.26■■□□□ 1.63
TRIM47-205ENST00000587774 CYP19A1P11511 503 aaPredicted RBP25.25■■□□□ 1.63
TRIM47-205ENST00000587774 FKBP8Q14318 412 aa25.25■■□□□ 1.63
TRIM47-205ENST00000587774 CACNA1SQ13698 1873 aa25.25■■□□□ 1.63
TRIM47-205ENST00000587774 ANKRD31Q8N7Z5 1873 aa25.25■■□□□ 1.63
TRIM47-205ENST00000587774 COL15A1P39059 1388 aa25.24■■□□□ 1.63
TRIM47-205ENST00000587774 GAS2L2Q8NHY3 880 aa25.24■■□□□ 1.63
TRIM47-205ENST00000587774 CFAP53Q96M91 514 aa25.24■■□□□ 1.63
TRIM47-205ENST00000587774 CEP350Q5VT06 3117 aa25.23■■□□□ 1.63
TRIM47-205ENST00000587774 GNAT3A8MTJ3 354 aa25.23■■□□□ 1.63
TRIM47-205ENST00000587774 GIGYF1O75420 1035 aaPredicted RBP25.23■■□□□ 1.63
TRIM47-205ENST00000587774 C1QTNF8P60827 252 aa25.23■■□□□ 1.63
TRIM47-205ENST00000587774 TGFB2P61812 414 aa25.23■■□□□ 1.63
TRIM47-205ENST00000587774 LAMB4A4D0S4 1761 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms