RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 TMOD3Q9NYL9 352 aa21.58■■□□□ 1.05
NCLN-203ENST00000587740 KIAA1551Q9HCM1 1747 aa21.58■■□□□ 1.04
NCLN-203ENST00000587740 PPM1GO15355 546 aaPredicted RBP21.57■■□□□ 1.04
NCLN-203ENST00000587740 MMP10P09238 476 aa21.57■■□□□ 1.04
NCLN-203ENST00000587740 ATP6V1AP38606 617 aa21.57■■□□□ 1.04
NCLN-203ENST00000587740 POLR3GLQ9BT43 218 aa21.57■■□□□ 1.04
NCLN-203ENST00000587740 ATG3Q9NT62 314 aa21.57■■□□□ 1.04
NCLN-203ENST00000587740 PXDNLA1KZ92 1463 aa21.57■■□□□ 1.04
NCLN-203ENST00000587740 KIF13BQ9NQT8 1826 aa21.57■■□□□ 1.04
NCLN-203ENST00000587740 WASHC2AQ641Q2 1341 aa21.56■■□□□ 1.04
NCLN-203ENST00000587740 ANKRD26Q9UPS8 1709 aa21.56■■□□□ 1.04
NCLN-203ENST00000587740 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.56■■□□□ 1.04
NCLN-203ENST00000587740 PHKG2P15735 406 aa21.55■■□□□ 1.04
NCLN-203ENST00000587740 N4BP2Q86UW6 1770 aaPredicted RBP21.55■■□□□ 1.04
NCLN-203ENST00000587740 SLC4A9Q96Q91 983 aa21.54■■□□□ 1.04
NCLN-203ENST00000587740 IFNL2Q8IZJ0 200 aa21.53■■□□□ 1.04
NCLN-203ENST00000587740 A0A0G2JLW4 131 aa21.52■■□□□ 1.04
NCLN-203ENST00000587740 KDRP35968 1356 aa21.51■■□□□ 1.03
NCLN-203ENST00000587740 TGFB2P61812 414 aa21.51■■□□□ 1.03
NCLN-203ENST00000587740 POLKQ9UBT6 870 aa21.51■■□□□ 1.03
NCLN-203ENST00000587740 BCS1LQ9Y276 419 aa21.51■■□□□ 1.03
NCLN-203ENST00000587740 C10orf71Q711Q0 1435 aa21.5■■□□□ 1.03
NCLN-203ENST00000587740 DNAJC5GQ8N7S2 189 aa21.5■■□□□ 1.03
NCLN-203ENST00000587740 TRAPPC3LQ5T215 181 aa21.49■■□□□ 1.03
NCLN-203ENST00000587740 ARHGEF1Q92888 912 aaKnown RBP21.49■■□□□ 1.03
NCLN-203ENST00000587740 RTCBQ9Y3I0 505 aaKnown RBP21.49■■□□□ 1.03
NCLN-203ENST00000587740 APLP1P51693 650 aa21.48■■□□□ 1.03
NCLN-203ENST00000587740 NLGN1Q8N2Q7 840 aa21.48■■□□□ 1.03
NCLN-203ENST00000587740 TOMM70O94826 608 aa21.47■■□□□ 1.03
NCLN-203ENST00000587740 GYS1P13807 737 aa21.47■■□□□ 1.03
NCLN-203ENST00000587740 DPEP1P16444 411 aa21.47■■□□□ 1.03
NCLN-203ENST00000587740 EIF4A2Q14240 407 aaKnown RBP21.47■■□□□ 1.03
NCLN-203ENST00000587740 NMRK2Q9NPI5 230 aa21.47■■□□□ 1.03
NCLN-203ENST00000587740 MYH14Q7Z406 1995 aaKnown RBP21.47■■□□□ 1.03
NCLN-203ENST00000587740 BRCA1P38398 1863 aaKnown RBP21.46■■□□□ 1.03
NCLN-203ENST00000587740 RC3H1Q5TC82 1133 aaKnown RBP21.46■■□□□ 1.03
NCLN-203ENST00000587740 ARHGAP27Q6ZUM4 889 aa21.46■■□□□ 1.03
NCLN-203ENST00000587740 RBM42Q9BTD8 480 aaKnown RBP21.46■■□□□ 1.03
NCLN-203ENST00000587740 ZNF831Q5JPB2 1677 aa21.45■■□□□ 1.02
NCLN-203ENST00000587740 KCNA3P22001 575 aa21.45■■□□□ 1.02
NCLN-203ENST00000587740 COL5A3P25940 1745 aaPredicted RBP21.45■■□□□ 1.02
NCLN-203ENST00000587740 KIF7Q2M1P5 1343 aa21.45■■□□□ 1.02
NCLN-203ENST00000587740 C4AP0C0L4 1744 aa21.44■■□□□ 1.02
NCLN-203ENST00000587740 ERVV-2B6SEH9 535 aa21.43■■□□□ 1.02
NCLN-203ENST00000587740 RPS6KA4O75676 772 aa21.43■■□□□ 1.02
NCLN-203ENST00000587740 FCHSD2O94868 740 aa21.43■■□□□ 1.02
NCLN-203ENST00000587740 ADRA2BP18089 450 aa21.43■■□□□ 1.02
NCLN-203ENST00000587740 CNTNAP4Q9C0A0 1308 aa21.43■■□□□ 1.02
NCLN-203ENST00000587740 CCDC87Q9NVE4 849 aa21.42■■□□□ 1.02
NCLN-203ENST00000587740 RFC4P35249 363 aa21.41■■□□□ 1.02
NCLN-203ENST00000587740 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
NCLN-203ENST00000587740 KDM6AO15550 1401 aaPredicted RBP21.4■■□□□ 1.02
NCLN-203ENST00000587740 PLEKHG2Q9H7P9 1386 aa21.4■■□□□ 1.02
NCLN-203ENST00000587740 C9orf131Q5VYM1 1079 aa21.4■■□□□ 1.02
NCLN-203ENST00000587740 DCAF5Q96JK2 942 aa21.4■■□□□ 1.02
NCLN-203ENST00000587740 PARP3Q9Y6F1 533 aa21.4■■□□□ 1.02
NCLN-203ENST00000587740 ARFGEF1Q9Y6D6 1849 aa21.39■■□□□ 1.02
NCLN-203ENST00000587740 HTRA3P83110 453 aa21.38■■□□□ 1.01
NCLN-203ENST00000587740 HSP90AB1P08238 724 aaKnown RBP21.37■■□□□ 1.01
NCLN-203ENST00000587740 RBM46Q8TBY0 533 aaKnown RBP21.37■■□□□ 1.01
NCLN-203ENST00000587740 PANK3Q9H999 370 aa21.37■■□□□ 1.01
NCLN-203ENST00000587740 SRP68Q9UHB9 627 aaKnown RBP21.37■■□□□ 1.01
NCLN-203ENST00000587740 WDR90Q96KV7 1748 aa21.36■■□□□ 1.01
NCLN-203ENST00000587740 DDR1Q08345 913 aa21.36■■□□□ 1.01
NCLN-203ENST00000587740 PLEKHO1Q53GL0 409 aaPredicted RBP21.36■■□□□ 1.01
NCLN-203ENST00000587740 ZNF530Q6P9A1 599 aaPredicted RBP21.36■■□□□ 1.01
NCLN-203ENST00000587740 PTCD1O75127 700 aaKnown RBP21.35■■□□□ 1.01
NCLN-203ENST00000587740 CRKLP46109 303 aaKnown RBP21.35■■□□□ 1.01
NCLN-203ENST00000587740 CABP4P57796 275 aa21.35■■□□□ 1.01
NCLN-203ENST00000587740 FKBP8Q14318 412 aa21.35■■□□□ 1.01
NCLN-203ENST00000587740 PIM2Q9P1W9 311 aa21.35■■□□□ 1.01
NCLN-203ENST00000587740 KCPQ6ZWJ8 1503 aa21.34■■□□□ 1.01
NCLN-203ENST00000587740 USP42Q9H9J4 1324 aaKnown RBP21.33■■□□□ 1.01
NCLN-203ENST00000587740 AEBP1Q8IUX7 1158 aa21.33■■□□□ 1.01
NCLN-203ENST00000587740 SBF1O95248 1867 aa21.32■■□□□ 1
NCLN-203ENST00000587740 CHRNA5P30532 468 aa21.32■■□□□ 1
NCLN-203ENST00000587740 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
NCLN-203ENST00000587740 PCNTO95613 3336 aa21.32■■□□□ 1
NCLN-203ENST00000587740 MTHFSP49914 203 aa21.31■■□□□ 1
NCLN-203ENST00000587740 AMOTQ4VCS5 1084 aa21.31■■□□□ 1
NCLN-203ENST00000587740 DALRD3Q5D0E6 543 aaKnown RBP21.31■■□□□ 1
NCLN-203ENST00000587740 KLRG1Q96E93 195 aa21.31■■□□□ 1
NCLN-203ENST00000587740 TJP1Q07157 1748 aa21.31■■□□□ 1
NCLN-203ENST00000587740 ADAMTS7Q9UKP4 1686 aa21.31■■□□□ 1
NCLN-203ENST00000587740 INTS5Q6P9B9 1019 aaKnown RBP21.3■■□□□ 1
NCLN-203ENST00000587740 C16orf71Q8IYS4 520 aaPredicted RBP21.3■■□□□ 1
NCLN-203ENST00000587740 JMYQ8N9B5 988 aa21.3■■□□□ 1
NCLN-203ENST00000587740 RRAGCQ9HB90 399 aa21.3■■□□□ 1
NCLN-203ENST00000587740 RNF181Q9P0P0 153 aa21.3■■□□□ 1
NCLN-203ENST00000587740 POLRMTO00411 1230 aaKnown RBP21.29■■□□□ 1
NCLN-203ENST00000587740 TM4SF1P30408 202 aa21.29■■□□□ 1
NCLN-203ENST00000587740 FSTL1Q12841 308 aa21.29■■□□□ 1
NCLN-203ENST00000587740 KNSTRNQ9Y448 316 aa21.29■■□□□ 1
NCLN-203ENST00000587740 COL13A1Q5TAT6 717 aaPredicted RBP21.28■■□□□ 1
NCLN-203ENST00000587740 KDM2BQ8NHM5 1336 aa21.28■■□□□ 1
NCLN-203ENST00000587740 C1orf141Q5JVX7 400 aa21.27■■□□□ 1
NCLN-203ENST00000587740 USPL1Q5W0Q7 1092 aa21.25■□□□□ 0.99
NCLN-203ENST00000587740 DNAJC10Q8IXB1 793 aa21.25■□□□□ 0.99
NCLN-203ENST00000587740 SCN11AQ9UI33 1791 aa21.24■□□□□ 0.99
NCLN-203ENST00000587740 PRELPP51888 382 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms