RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 C1QTNF8P60827 252 aa8.85□□□□□ -0.99
SDF2-205ENST00000587629 LINC00116Q8NCU8 138 aa8.85□□□□□ -0.99
SDF2-205ENST00000587629 FLAD1Q8NFF5 587 aa8.85□□□□□ -0.99
SDF2-205ENST00000587629 TMOD3Q9NYL9 352 aa8.85□□□□□ -0.99
SDF2-205ENST00000587629 C5P01031 1676 aa8.85□□□□□ -0.99
SDF2-205ENST00000587629 LOC102724428A0A0B4J2F2 783 aa8.84□□□□□ -0.99
SDF2-205ENST00000587629 GRIN3BO60391 1043 aa8.84□□□□□ -0.99
SDF2-205ENST00000587629 PHKG2P15735 406 aa8.84□□□□□ -0.99
SDF2-205ENST00000587629 ATP6V1AP38606 617 aa8.84□□□□□ -0.99
SDF2-205ENST00000587629 SIK1P57059 783 aa8.84□□□□□ -0.99
SDF2-205ENST00000587629 ITPK1Q13572 414 aa8.84□□□□□ -0.99
SDF2-205ENST00000587629 EIF4A2Q14240 407 aaKnown RBP8.84□□□□□ -0.99
SDF2-205ENST00000587629 NKX1-1Q15270 411 aaPredicted RBP8.84□□□□□ -0.99
SDF2-205ENST00000587629 IFNL2Q8IZJ0 200 aa8.84□□□□□ -0.99
SDF2-205ENST00000587629 TIMELESSQ9UNS1 1208 aa8.84□□□□□ -0.99
SDF2-205ENST00000587629 ZBTB12Q9Y330 459 aaPredicted RBP8.84□□□□□ -0.99
SDF2-205ENST00000587629 TOGARAM1Q9Y4F4 1720 aa8.84□□□□□ -0.99
SDF2-205ENST00000587629 CHD4Q14839 1912 aa8.84□□□□□ -1
SDF2-205ENST00000587629 COL24A1Q17RW2 1714 aa8.83□□□□□ -1
SDF2-205ENST00000587629 GNPATO15228 680 aa8.83□□□□□ -1
SDF2-205ENST00000587629 GIGYF1O75420 1035 aaPredicted RBP8.83□□□□□ -1
SDF2-205ENST00000587629 HSPA5P11021 654 aaKnown RBP8.83□□□□□ -1
SDF2-205ENST00000587629 PANK3Q9H999 370 aa8.83□□□□□ -1
SDF2-205ENST00000587629 CD2APQ9Y5K6 639 aa8.83□□□□□ -1
SDF2-205ENST00000587629 ITGB4P16144 1822 aa8.82□□□□□ -1
SDF2-205ENST00000587629 HMGB2P26583 209 aaKnown RBP8.82□□□□□ -1
SDF2-205ENST00000587629 EIF4G2P78344 907 aaKnown RBP eCLIP8.82□□□□□ -1
SDF2-205ENST00000587629 ATG3Q9NT62 314 aa8.82□□□□□ -1
SDF2-205ENST00000587629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.82□□□□□ -1
SDF2-205ENST00000587629 C4BP0C0L5 1744 aa8.82□□□□□ -1
SDF2-205ENST00000587629 NCAPD2Q15021 1401 aa8.81□□□□□ -1
SDF2-205ENST00000587629 PKD1L3Q7Z443 1732 aa8.81□□□□□ -1
SDF2-205ENST00000587629 ZNF526Q8TF50 670 aaPredicted RBP8.81□□□□□ -1
SDF2-205ENST00000587629 MAP2P11137 1827 aaKnown RBP8.81□□□□□ -1
SDF2-205ENST00000587629 IGSF1Q8N6C5 1336 aa8.8□□□□□ -1
SDF2-205ENST00000587629 TAF1LQ8IZX4 1826 aa8.8□□□□□ -1
SDF2-205ENST00000587629 ZBTB22O15209 634 aa8.8□□□□□ -1
SDF2-205ENST00000587629 SSFA2P28290 1259 aa8.8□□□□□ -1
SDF2-205ENST00000587629 MORC1Q86VD1 984 aa8.8□□□□□ -1
SDF2-205ENST00000587629 AEBP1Q8IUX7 1158 aa8.8□□□□□ -1
SDF2-205ENST00000587629 CCER1Q8TC90 406 aaPredicted RBP8.8□□□□□ -1
SDF2-205ENST00000587629 MMP10P09238 476 aa8.79□□□□□ -1
SDF2-205ENST00000587629 CABP4P57796 275 aa8.79□□□□□ -1
SDF2-205ENST00000587629 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
SDF2-205ENST00000587629 ZNF530Q6P9A1 599 aaPredicted RBP8.79□□□□□ -1
SDF2-205ENST00000587629 SLC4A9Q96Q91 983 aa8.79□□□□□ -1
SDF2-205ENST00000587629 ANKRD26Q9UPS8 1709 aa8.79□□□□□ -1
SDF2-205ENST00000587629 ATP10DQ9P241 1426 aa8.79□□□□□ -1
SDF2-205ENST00000587629 CLSPNQ9HAW4 1339 aa8.79□□□□□ -1
SDF2-205ENST00000587629 ERVV-2B6SEH9 535 aa8.78□□□□□ -1
SDF2-205ENST00000587629 PTCD1O75127 700 aaKnown RBP8.78□□□□□ -1
SDF2-205ENST00000587629 MTHFSP49914 203 aa8.78□□□□□ -1
SDF2-205ENST00000587629 TRAPPC3LQ5T215 181 aa8.78□□□□□ -1
SDF2-205ENST00000587629 SULT6B1Q6IMI4 303 aa8.78□□□□□ -1
SDF2-205ENST00000587629 DCAF5Q96JK2 942 aa8.78□□□□□ -1
SDF2-205ENST00000587629 GPBP1L1Q9HC44 474 aaPredicted RBP8.78□□□□□ -1
SDF2-205ENST00000587629 RTCBQ9Y3I0 505 aaKnown RBP8.78□□□□□ -1
SDF2-205ENST00000587629 UBR3Q6ZT12 1888 aa8.78□□□□□ -1
SDF2-205ENST00000587629 A0A0G2JLW4 131 aa8.77□□□□□ -1.01
SDF2-205ENST00000587629 HSP90AB1P08238 724 aaKnown RBP8.77□□□□□ -1.01
SDF2-205ENST00000587629 C1orf141Q5JVX7 400 aa8.77□□□□□ -1.01
SDF2-205ENST00000587629 NFATC2IPQ8NCF5 419 aa8.77□□□□□ -1.01
SDF2-205ENST00000587629 ARHGEF1Q92888 912 aaKnown RBP8.77□□□□□ -1.01
SDF2-205ENST00000587629 KNSTRNQ9Y448 316 aa8.77□□□□□ -1.01
SDF2-205ENST00000587629 RFC4P35249 363 aa8.76□□□□□ -1.01
SDF2-205ENST00000587629 CNGB1Q14028 1251 aaPredicted RBP8.76□□□□□ -1.01
SDF2-205ENST00000587629 AMOTQ4VCS5 1084 aa8.76□□□□□ -1.01
SDF2-205ENST00000587629 LHX8Q68G74 356 aa8.76□□□□□ -1.01
SDF2-205ENST00000587629 KDM6AO15550 1401 aaPredicted RBP8.76□□□□□ -1.01
SDF2-205ENST00000587629 KDRP35968 1356 aa8.75□□□□□ -1.01
SDF2-205ENST00000587629 GYS1P13807 737 aa8.75□□□□□ -1.01
SDF2-205ENST00000587629 RC3H1Q5TC82 1133 aaKnown RBP8.75□□□□□ -1.01
SDF2-205ENST00000587629 NLGN1Q8N2Q7 840 aa8.75□□□□□ -1.01
SDF2-205ENST00000587629 BCS1LQ9Y276 419 aa8.75□□□□□ -1.01
SDF2-205ENST00000587629 RPS6KA4O75676 772 aa8.74□□□□□ -1.01
SDF2-205ENST00000587629 HMOX1P09601 288 aa8.74□□□□□ -1.01
SDF2-205ENST00000587629 DPEP1P16444 411 aa8.74□□□□□ -1.01
SDF2-205ENST00000587629 IL13P35225 146 aa8.74□□□□□ -1.01
SDF2-205ENST00000587629 CRKLP46109 303 aaKnown RBP8.74□□□□□ -1.01
SDF2-205ENST00000587629 ARHGAP27Q6ZUM4 889 aa8.74□□□□□ -1.01
SDF2-205ENST00000587629 SRP68Q9UHB9 627 aaKnown RBP8.74□□□□□ -1.01
SDF2-205ENST00000587629 PARP3Q9Y6F1 533 aa8.74□□□□□ -1.01
SDF2-205ENST00000587629 CNTNAP4Q9C0A0 1308 aa8.74□□□□□ -1.01
SDF2-205ENST00000587629 CICQ96RK0 1608 aaPredicted RBP8.73□□□□□ -1.01
SDF2-205ENST00000587629 TGFB2P61812 414 aa8.73□□□□□ -1.01
SDF2-205ENST00000587629 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
SDF2-205ENST00000587629 LGR6Q9HBX8 967 aa8.73□□□□□ -1.01
SDF2-205ENST00000587629 CCDC87Q9NVE4 849 aa8.73□□□□□ -1.01
SDF2-205ENST00000587629 ADCY9O60503 1353 aa8.73□□□□□ -1.01
SDF2-205ENST00000587629 PXDNLA1KZ92 1463 aa8.72□□□□□ -1.01
SDF2-205ENST00000587629 FCHSD2O94868 740 aa8.72□□□□□ -1.01
SDF2-205ENST00000587629 ATXN8OSP0DMR3 200 aa8.72□□□□□ -1.01
SDF2-205ENST00000587629 SLC39A6Q13433 755 aa8.72□□□□□ -1.01
SDF2-205ENST00000587629 FKBP8Q14318 412 aa8.72□□□□□ -1.01
SDF2-205ENST00000587629 AMER1Q5JTC6 1135 aaPredicted RBP8.72□□□□□ -1.01
SDF2-205ENST00000587629 INTS5Q6P9B9 1019 aaKnown RBP8.72□□□□□ -1.01
SDF2-205ENST00000587629 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
SDF2-205ENST00000587629 CEP350Q5VT06 3117 aa8.72□□□□□ -1.01
SDF2-205ENST00000587629 KIF7Q2M1P5 1343 aa8.72□□□□□ -1.01
SDF2-205ENST00000587629 N4BP2Q86UW6 1770 aaPredicted RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms