RNA–Protein interactions for RNA: ENST00000587336.1

SMAD7-205, Transcript of SMAD family member 7, humanhuman

TSL 4

Gene SMAD7, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-205ENST00000587336 MSL1Q68DK7 614 aa15.13■□□□□ 0.01
SMAD7-205ENST00000587336 TOGARAM1Q9Y4F4 1720 aa15.13■□□□□ 0.01
SMAD7-205ENST00000587336 PNISRQ8TF01 805 aaKnown RBP15.12■□□□□ 0.01
SMAD7-205ENST00000587336 COL24A1Q17RW2 1714 aa15.12■□□□□ 0.01
SMAD7-205ENST00000587336 TAF1LQ8IZX4 1826 aa15.11■□□□□ 0.01
SMAD7-205ENST00000587336 CYP27B1O15528 508 aa15.11■□□□□ 0.01
SMAD7-205ENST00000587336 TNNT2P45379 298 aaPredicted RBP15.11■□□□□ 0.01
SMAD7-205ENST00000587336 COL23A1Q86Y22 540 aaPredicted RBP15.11■□□□□ 0.01
SMAD7-205ENST00000587336 PALLDQ8WX93 1383 aa15.11■□□□□ 0.01
SMAD7-205ENST00000587336 PKD1L3Q7Z443 1732 aa15.1■□□□□ 0.01
SMAD7-205ENST00000587336 KIF24Q5T7B8 1368 aa15.09■□□□□ 0.01
SMAD7-205ENST00000587336 ANKRD26Q9UPS8 1709 aa15.09■□□□□ 0.01
SMAD7-205ENST00000587336 AMER1Q5JTC6 1135 aaPredicted RBP15.08■□□□□ 0
SMAD7-205ENST00000587336 SMIM5Q71RC9 77 aa15.08■□□□□ 0
SMAD7-205ENST00000587336 PCNTO95613 3336 aa15.08■□□□□ 0
SMAD7-205ENST00000587336 EYA1Q99502 592 aa15.07■□□□□ 0
SMAD7-205ENST00000587336 C4BP0C0L5 1744 aa15.06■□□□□ 0
SMAD7-205ENST00000587336 PHF14O94880 888 aa15.06■□□□□ 0
SMAD7-205ENST00000587336 PIGBQ92521 554 aa15.06■□□□□ 0
SMAD7-205ENST00000587336 SPG7Q9UQ90 795 aa15.06■□□□□ 0
SMAD7-205ENST00000587336 JMYQ8N9B5 988 aa15.05■□□□□ -0
SMAD7-205ENST00000587336 KLRG1Q96E93 195 aa15.05■□□□□ -0
SMAD7-205ENST00000587336 AK7Q96M32 723 aa15.05■□□□□ -0
SMAD7-205ENST00000587336 POLKQ9UBT6 870 aa15.05■□□□□ -0
SMAD7-205ENST00000587336 PPP2R1AP30153 589 aa15.04■□□□□ -0
SMAD7-205ENST00000587336 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
SMAD7-205ENST00000587336 UBR3Q6ZT12 1888 aa15.03■□□□□ -0
SMAD7-205ENST00000587336 TOMM70O94826 608 aa15.03■□□□□ -0
SMAD7-205ENST00000587336 AMIGO3Q86WK7 504 aa15.03■□□□□ -0
SMAD7-205ENST00000587336 SUPT16HQ9Y5B9 1047 aaKnown RBP15.03■□□□□ -0
SMAD7-205ENST00000587336 NCAPD2Q15021 1401 aa15.02■□□□□ -0
SMAD7-205ENST00000587336 EIF4A2Q14240 407 aaKnown RBP15.02■□□□□ -0
SMAD7-205ENST00000587336 TMOD3Q9NYL9 352 aa15.02■□□□□ -0
SMAD7-205ENST00000587336 WWC3Q9ULE0 1092 aa15.02■□□□□ -0
SMAD7-205ENST00000587336 WDR90Q96KV7 1748 aa15.01□□□□□ -0.01
SMAD7-205ENST00000587336 HTRA3P83110 453 aa15.01□□□□□ -0.01
SMAD7-205ENST00000587336 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
SMAD7-205ENST00000587336 LINC00116Q8NCU8 138 aa15.01□□□□□ -0.01
SMAD7-205ENST00000587336 FLAD1Q8NFF5 587 aa15.01□□□□□ -0.01
SMAD7-205ENST00000587336 ASAP1Q9ULH1 1129 aa15.01□□□□□ -0.01
SMAD7-205ENST00000587336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15□□□□□ -0.01
SMAD7-205ENST00000587336 LOC102724428A0A0B4J2F2 783 aa15□□□□□ -0.01
SMAD7-205ENST00000587336 PHKG2P15735 406 aa15□□□□□ -0.01
SMAD7-205ENST00000587336 SIK1P57059 783 aa15□□□□□ -0.01
SMAD7-205ENST00000587336 WDR43Q15061 677 aaKnown RBP eCLIP15□□□□□ -0.01
SMAD7-205ENST00000587336 NKX1-1Q15270 411 aaPredicted RBP15□□□□□ -0.01
SMAD7-205ENST00000587336 CD2APQ9Y5K6 639 aa15□□□□□ -0.01
SMAD7-205ENST00000587336 ATP6V1AP38606 617 aa14.99□□□□□ -0.01
SMAD7-205ENST00000587336 GNPATO15228 680 aa14.98□□□□□ -0.01
SMAD7-205ENST00000587336 ITPK1Q13572 414 aa14.98□□□□□ -0.01
SMAD7-205ENST00000587336 FKBP8Q14318 412 aa14.98□□□□□ -0.01
SMAD7-205ENST00000587336 PCDH10Q9P2E7 1040 aa14.98□□□□□ -0.01
SMAD7-205ENST00000587336 HMGB2P26583 209 aaKnown RBP14.97□□□□□ -0.01
SMAD7-205ENST00000587336 ATG3Q9NT62 314 aa14.97□□□□□ -0.01
SMAD7-205ENST00000587336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.97□□□□□ -0.01
SMAD7-205ENST00000587336 MORC1Q86VD1 984 aa14.96□□□□□ -0.01
SMAD7-205ENST00000587336 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
SMAD7-205ENST00000587336 NUDCQ9Y266 331 aa14.96□□□□□ -0.01
SMAD7-205ENST00000587336 SSFA2P28290 1259 aa14.95□□□□□ -0.02
SMAD7-205ENST00000587336 IGSF1Q8N6C5 1336 aa14.94□□□□□ -0.02
SMAD7-205ENST00000587336 ZNF530Q6P9A1 599 aaPredicted RBP14.94□□□□□ -0.02
SMAD7-205ENST00000587336 AEBP1Q8IUX7 1158 aa14.94□□□□□ -0.02
SMAD7-205ENST00000587336 PLEKHO1Q53GL0 409 aaPredicted RBP14.93□□□□□ -0.02
SMAD7-205ENST00000587336 ERICH6BQ5W0A0 696 aa14.93□□□□□ -0.02
SMAD7-205ENST00000587336 RBM46Q8TBY0 533 aaKnown RBP14.93□□□□□ -0.02
SMAD7-205ENST00000587336 NMRK2Q9NPI5 230 aa14.93□□□□□ -0.02
SMAD7-205ENST00000587336 HSPA1AP0DMV8 641 aaKnown RBP14.91□□□□□ -0.02
SMAD7-205ENST00000587336 HSPA1BP0DMV9 641 aaKnown RBP14.91□□□□□ -0.02
SMAD7-205ENST00000587336 CABP4P57796 275 aa14.91□□□□□ -0.02
SMAD7-205ENST00000587336 DCAF5Q96JK2 942 aa14.91□□□□□ -0.02
SMAD7-205ENST00000587336 CFAP53Q96M91 514 aa14.91□□□□□ -0.02
SMAD7-205ENST00000587336 SLC4A9Q96Q91 983 aa14.91□□□□□ -0.02
SMAD7-205ENST00000587336 KDM6AO15550 1401 aaPredicted RBP14.91□□□□□ -0.02
SMAD7-205ENST00000587336 KDRP35968 1356 aa14.9□□□□□ -0.02
SMAD7-205ENST00000587336 COL5A3P25940 1745 aaPredicted RBP14.9□□□□□ -0.02
SMAD7-205ENST00000587336 ERVV-2B6SEH9 535 aa14.9□□□□□ -0.02
SMAD7-205ENST00000587336 HSP90AB1P08238 724 aaKnown RBP14.9□□□□□ -0.02
SMAD7-205ENST00000587336 MMP10P09238 476 aa14.9□□□□□ -0.02
SMAD7-205ENST00000587336 C1orf141Q5JVX7 400 aa14.9□□□□□ -0.02
SMAD7-205ENST00000587336 SULT6B1Q6IMI4 303 aa14.9□□□□□ -0.02
SMAD7-205ENST00000587336 RTCBQ9Y3I0 505 aaKnown RBP14.9□□□□□ -0.02
SMAD7-205ENST00000587336 N4BP2Q86UW6 1770 aaPredicted RBP14.9□□□□□ -0.02
SMAD7-205ENST00000587336 PTCD1O75127 700 aaKnown RBP14.89□□□□□ -0.03
SMAD7-205ENST00000587336 MTHFSP49914 203 aa14.89□□□□□ -0.03
SMAD7-205ENST00000587336 FSTL1Q12841 308 aa14.89□□□□□ -0.03
SMAD7-205ENST00000587336 TRAPPC3LQ5T215 181 aa14.89□□□□□ -0.03
SMAD7-205ENST00000587336 C16orf71Q8IYS4 520 aaPredicted RBP14.89□□□□□ -0.03
SMAD7-205ENST00000587336 ADAMTS8Q9UP79 889 aa14.89□□□□□ -0.03
SMAD7-205ENST00000587336 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
SMAD7-205ENST00000587336 CICQ96RK0 1608 aaPredicted RBP14.88□□□□□ -0.03
SMAD7-205ENST00000587336 AMOTQ4VCS5 1084 aa14.88□□□□□ -0.03
SMAD7-205ENST00000587336 NGEFQ8N5V2 710 aa14.87□□□□□ -0.03
SMAD7-205ENST00000587336 NFATC2IPQ8NCF5 419 aa14.87□□□□□ -0.03
SMAD7-205ENST00000587336 ARHGEF1Q92888 912 aaKnown RBP14.87□□□□□ -0.03
SMAD7-205ENST00000587336 C4AP0C0L4 1744 aa14.86□□□□□ -0.03
SMAD7-205ENST00000587336 RFC4P35249 363 aa14.86□□□□□ -0.03
SMAD7-205ENST00000587336 VIRMAQ69YN4 1812 aaKnown RBP14.86□□□□□ -0.03
SMAD7-205ENST00000587336 PLEKHG2Q9H7P9 1386 aa14.85□□□□□ -0.03
SMAD7-205ENST00000587336 SCN11AQ9UI33 1791 aa14.85□□□□□ -0.03
SMAD7-205ENST00000587336 ZNF831Q5JPB2 1677 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms