RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 RTF1Q92541 710 aaKnown RBP6.81□□□□□ -1.32
LINC01140-208ENST00000587165 ARXQ96QS3 562 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 PNNQ9H307 717 aaKnown RBP6.81□□□□□ -1.32
LINC01140-208ENST00000587165 SLC52A2Q9HAB3 445 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 ATG3Q9NT62 314 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 ASAP1Q9ULH1 1129 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 MAP3K5Q99683 1374 aa6.81□□□□□ -1.32
LINC01140-208ENST00000587165 COL3A1P02461 1466 aaPredicted RBP6.8□□□□□ -1.32
LINC01140-208ENST00000587165 PAPPAQ13219 1627 aa6.8□□□□□ -1.32
LINC01140-208ENST00000587165 GNAT3A8MTJ3 354 aa6.8□□□□□ -1.32
LINC01140-208ENST00000587165 KDM6AO15550 1401 aaPredicted RBP6.8□□□□□ -1.32
LINC01140-208ENST00000587165 RNMTO43148 476 aaKnown RBP6.8□□□□□ -1.32
LINC01140-208ENST00000587165 PTCD1O75127 700 aaKnown RBP6.8□□□□□ -1.32
LINC01140-208ENST00000587165 FCHSD2O94868 740 aa6.8□□□□□ -1.32
LINC01140-208ENST00000587165 MTHFSDQ2M296 383 aaKnown RBP6.8□□□□□ -1.32
LINC01140-208ENST00000587165 NFATC2IPQ8NCF5 419 aa6.8□□□□□ -1.32
LINC01140-208ENST00000587165 PDGFDQ9GZP0 370 aaPredicted RBP6.8□□□□□ -1.32
LINC01140-208ENST00000587165 RTCBQ9Y3I0 505 aaKnown RBP6.8□□□□□ -1.32
LINC01140-208ENST00000587165 MAPK8IP3Q9UPT6 1336 aa6.79□□□□□ -1.32
LINC01140-208ENST00000587165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.79□□□□□ -1.32
LINC01140-208ENST00000587165 ADRA2BP18089 450 aa6.79□□□□□ -1.32
LINC01140-208ENST00000587165 PTGER2P43116 358 aa6.79□□□□□ -1.32
LINC01140-208ENST00000587165 DDX10Q13206 875 aaKnown RBP6.79□□□□□ -1.32
LINC01140-208ENST00000587165 NPM2Q86SE8 214 aaKnown RBP6.79□□□□□ -1.32
LINC01140-208ENST00000587165 COL23A1Q86Y22 540 aaPredicted RBP6.79□□□□□ -1.32
LINC01140-208ENST00000587165 LINC00116Q8NCU8 138 aa6.79□□□□□ -1.32
LINC01140-208ENST00000587165 CNTNAP4Q9C0A0 1308 aa6.78□□□□□ -1.32
LINC01140-208ENST00000587165 CASZ1Q86V15 1759 aa6.78□□□□□ -1.32
LINC01140-208ENST00000587165 ITPK1Q13572 414 aa6.78□□□□□ -1.32
LINC01140-208ENST00000587165 TRAPPC3LQ5T215 181 aa6.78□□□□□ -1.32
LINC01140-208ENST00000587165 RC3H1Q5TC82 1133 aaKnown RBP6.78□□□□□ -1.32
LINC01140-208ENST00000587165 MSL1Q68DK7 614 aa6.78□□□□□ -1.32
LINC01140-208ENST00000587165 FHDC1Q9C0D6 1143 aaPredicted RBP6.78□□□□□ -1.32
LINC01140-208ENST00000587165 RSPH6AQ9H0K4 717 aa6.78□□□□□ -1.32
LINC01140-208ENST00000587165 LY75O60449 1722 aa6.78□□□□□ -1.32
LINC01140-208ENST00000587165 TOGARAM1Q9Y4F4 1720 aa6.78□□□□□ -1.32
LINC01140-208ENST00000587165 MYBBP1AQ9BQG0 1328 aaKnown RBP6.77□□□□□ -1.32
LINC01140-208ENST00000587165 HTATSF1O43719 755 aaKnown RBP6.77□□□□□ -1.33
LINC01140-208ENST00000587165 STARD3NLO95772 234 aa6.77□□□□□ -1.33
LINC01140-208ENST00000587165 RFC4P35249 363 aa6.77□□□□□ -1.33
LINC01140-208ENST00000587165 CRKLP46109 303 aaKnown RBP6.77□□□□□ -1.33
LINC01140-208ENST00000587165 WDR43Q15061 677 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC01140-208ENST00000587165 SGIP1Q9BQI5 828 aa6.77□□□□□ -1.33
LINC01140-208ENST00000587165 SYT17Q9BSW7 474 aa6.77□□□□□ -1.33
LINC01140-208ENST00000587165 LGR6Q9HBX8 967 aa6.77□□□□□ -1.33
LINC01140-208ENST00000587165 MRC1P22897 1456 aa6.77□□□□□ -1.33
LINC01140-208ENST00000587165 C4BP0C0L5 1744 aa6.76□□□□□ -1.33
LINC01140-208ENST00000587165 RPS6KA4O75676 772 aa6.76□□□□□ -1.33
LINC01140-208ENST00000587165 LMOD3Q0VAK6 560 aa6.76□□□□□ -1.33
LINC01140-208ENST00000587165 PELP1Q8IZL8 1130 aaKnown RBP6.76□□□□□ -1.33
LINC01140-208ENST00000587165 VSIG10Q8N0Z9 540 aa6.76□□□□□ -1.33
LINC01140-208ENST00000587165 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
LINC01140-208ENST00000587165 FMNL2Q96PY5 1086 aa6.76□□□□□ -1.33
LINC01140-208ENST00000587165 TEX13AQ9BXU3 409 aaPredicted RBP6.76□□□□□ -1.33
LINC01140-208ENST00000587165 CCDC87Q9NVE4 849 aa6.76□□□□□ -1.33
LINC01140-208ENST00000587165 C5P01031 1676 aa6.76□□□□□ -1.33
LINC01140-208ENST00000587165 ITGB4P16144 1822 aa6.76□□□□□ -1.33
LINC01140-208ENST00000587165 A0A087WZG4 1122 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 BTBD11A6QL63 1104 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 ZPR1O75312 459 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 SLC39A6Q13433 755 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 GPR162Q16538 588 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 ZNF790Q6PG37 636 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 DNAJC10Q8IXB1 793 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 PNISRQ8TF01 805 aaKnown RBP6.75□□□□□ -1.33
LINC01140-208ENST00000587165 PHACTR3Q96KR7 559 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 CD2APQ9Y5K6 639 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 QSER1Q2KHR3 1735 aa6.75□□□□□ -1.33
LINC01140-208ENST00000587165 CEMIPQ8WUJ3 1361 aa6.74□□□□□ -1.33
LINC01140-208ENST00000587165 MMP10P09238 476 aa6.74□□□□□ -1.33
LINC01140-208ENST00000587165 NFE2L2Q16236 605 aa6.74□□□□□ -1.33
LINC01140-208ENST00000587165 IL17REQ8NFR9 667 aa6.74□□□□□ -1.33
LINC01140-208ENST00000587165 SLC4A9Q96Q91 983 aa6.74□□□□□ -1.33
LINC01140-208ENST00000587165 PARP3Q9Y6F1 533 aa6.74□□□□□ -1.33
LINC01140-208ENST00000587165 HEG1Q9ULI3 1381 aa6.73□□□□□ -1.33
LINC01140-208ENST00000587165 GRIN3BO60391 1043 aa6.73□□□□□ -1.33
LINC01140-208ENST00000587165 CYP19A1P11511 503 aaPredicted RBP6.73□□□□□ -1.33
LINC01140-208ENST00000587165 YY1P25490 414 aa6.73□□□□□ -1.33
LINC01140-208ENST00000587165 MCM10Q7L590 875 aa6.73□□□□□ -1.33
LINC01140-208ENST00000587165 ARHGEF1Q92888 912 aaKnown RBP6.73□□□□□ -1.33
LINC01140-208ENST00000587165 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
LINC01140-208ENST00000587165 ZNF330Q9Y3S2 320 aaPredicted RBP6.73□□□□□ -1.33
LINC01140-208ENST00000587165 SOS1Q07889 1333 aaPredicted RBP6.73□□□□□ -1.33
LINC01140-208ENST00000587165 USP42Q9H9J4 1324 aaKnown RBP6.73□□□□□ -1.33
LINC01140-208ENST00000587165 COL15A1P39059 1388 aa6.72□□□□□ -1.33
LINC01140-208ENST00000587165 ZNF831Q5JPB2 1677 aa6.72□□□□□ -1.33
LINC01140-208ENST00000587165 ZNF316A6NFI3 1004 aaPredicted RBP6.72□□□□□ -1.33
LINC01140-208ENST00000587165 NPHP1O15259 732 aa6.72□□□□□ -1.33
LINC01140-208ENST00000587165 SNRPA1P09661 255 aaKnown RBP6.72□□□□□ -1.33
LINC01140-208ENST00000587165 GYS1P13807 737 aa6.72□□□□□ -1.33
LINC01140-208ENST00000587165 CANXP27824 592 aaKnown RBP6.72□□□□□ -1.33
LINC01140-208ENST00000587165 TAF7Q15545 349 aaPredicted RBP6.72□□□□□ -1.33
LINC01140-208ENST00000587165 AMIGO3Q86WK7 504 aa6.72□□□□□ -1.33
LINC01140-208ENST00000587165 PRKRIP1Q9H875 184 aaPredicted RBP6.72□□□□□ -1.33
LINC01140-208ENST00000587165 SCN11AQ9UI33 1791 aa6.72□□□□□ -1.33
LINC01140-208ENST00000587165 TAF1LQ8IZX4 1826 aa6.71□□□□□ -1.33
LINC01140-208ENST00000587165 KCPQ6ZWJ8 1503 aa6.71□□□□□ -1.33
LINC01140-208ENST00000587165 ANP32CO43423 234 aa6.71□□□□□ -1.34
LINC01140-208ENST00000587165 IL6STP40189 918 aaPredicted RBP6.71□□□□□ -1.34
LINC01140-208ENST00000587165 RIPK4P57078 832 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms