RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 SSFA2P28290 1259 aa19.18■□□□□ 0.66
ATG4D-206ENST00000586863 ATP6V1AP38606 617 aa19.18■□□□□ 0.66
ATG4D-206ENST00000586863 COL5A3P25940 1745 aaPredicted RBP19.17■□□□□ 0.66
ATG4D-206ENST00000586863 GNPATO15228 680 aa19.17■□□□□ 0.66
ATG4D-206ENST00000586863 CD2APQ9Y5K6 639 aa19.17■□□□□ 0.66
ATG4D-206ENST00000586863 ZNF831Q5JPB2 1677 aa19.17■□□□□ 0.66
ATG4D-206ENST00000586863 ERVV-2B6SEH9 535 aa19.16■□□□□ 0.66
ATG4D-206ENST00000586863 PLEKHO1Q53GL0 409 aaPredicted RBP19.16■□□□□ 0.66
ATG4D-206ENST00000586863 ZNF530Q6P9A1 599 aaPredicted RBP19.16■□□□□ 0.66
ATG4D-206ENST00000586863 DCAF5Q96JK2 942 aa19.16■□□□□ 0.66
ATG4D-206ENST00000586863 SLC4A9Q96Q91 983 aa19.16■□□□□ 0.66
ATG4D-206ENST00000586863 KNSTRNQ9Y448 316 aa19.16■□□□□ 0.66
ATG4D-206ENST00000586863 MYH14Q7Z406 1995 aaKnown RBP19.15■□□□□ 0.66
ATG4D-206ENST00000586863 HSP90AB1P08238 724 aaKnown RBP19.15■□□□□ 0.66
ATG4D-206ENST00000586863 AMER1Q5JTC6 1135 aaPredicted RBP19.15■□□□□ 0.66
ATG4D-206ENST00000586863 KIF7Q2M1P5 1343 aa19.15■□□□□ 0.66
ATG4D-206ENST00000586863 GRIN3BO60391 1043 aa19.14■□□□□ 0.65
ATG4D-206ENST00000586863 IL13P35225 146 aa19.13■□□□□ 0.65
ATG4D-206ENST00000586863 AMOTQ4VCS5 1084 aa19.13■□□□□ 0.65
ATG4D-206ENST00000586863 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
ATG4D-206ENST00000586863 SCN11AQ9UI33 1791 aa19.13■□□□□ 0.65
ATG4D-206ENST00000586863 RBM42Q9BTD8 480 aaKnown RBP19.12■□□□□ 0.65
ATG4D-206ENST00000586863 CABP4P57796 275 aa19.11■□□□□ 0.65
ATG4D-206ENST00000586863 VIRMAQ69YN4 1812 aaKnown RBP19.11■□□□□ 0.65
ATG4D-206ENST00000586863 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
ATG4D-206ENST00000586863 MTHFSP49914 203 aa19.1■□□□□ 0.65
ATG4D-206ENST00000586863 KIF13BQ9NQT8 1826 aa19.09■□□□□ 0.65
ATG4D-206ENST00000586863 C1orf141Q5JVX7 400 aa19.09■□□□□ 0.65
ATG4D-206ENST00000586863 WWC3Q9ULE0 1092 aa19.09■□□□□ 0.65
ATG4D-206ENST00000586863 TJP1Q07157 1748 aa19.08■□□□□ 0.65
ATG4D-206ENST00000586863 KIAA1551Q9HCM1 1747 aa19.08■□□□□ 0.65
ATG4D-206ENST00000586863 CICQ96RK0 1608 aaPredicted RBP19.08■□□□□ 0.65
ATG4D-206ENST00000586863 CNTNAP4Q9C0A0 1308 aa19.08■□□□□ 0.65
ATG4D-206ENST00000586863 C1QTNF8P60827 252 aa19.08■□□□□ 0.64
ATG4D-206ENST00000586863 RTCBQ9Y3I0 505 aaKnown RBP19.08■□□□□ 0.64
ATG4D-206ENST00000586863 MMP10P09238 476 aa19.07■□□□□ 0.64
ATG4D-206ENST00000586863 TRAPPC3LQ5T215 181 aa19.07■□□□□ 0.64
ATG4D-206ENST00000586863 CEP350Q5VT06 3117 aa19.07■□□□□ 0.64
ATG4D-206ENST00000586863 PTCD1O75127 700 aaKnown RBP19.06■□□□□ 0.64
ATG4D-206ENST00000586863 RC3H1Q5TC82 1133 aaKnown RBP19.06■□□□□ 0.64
ATG4D-206ENST00000586863 NFATC2IPQ8NCF5 419 aa19.06■□□□□ 0.64
ATG4D-206ENST00000586863 N4BP2Q86UW6 1770 aaPredicted RBP19.06■□□□□ 0.64
ATG4D-206ENST00000586863 PER1O15534 1290 aaPredicted RBP19.05■□□□□ 0.64
ATG4D-206ENST00000586863 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
ATG4D-206ENST00000586863 ADRA2BP18089 450 aa19.05■□□□□ 0.64
ATG4D-206ENST00000586863 ARHGEF1Q92888 912 aaKnown RBP19.05■□□□□ 0.64
ATG4D-206ENST00000586863 ATP10DQ9P241 1426 aa19.05■□□□□ 0.64
ATG4D-206ENST00000586863 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
ATG4D-206ENST00000586863 RPS6KA4O75676 772 aa19.04■□□□□ 0.64
ATG4D-206ENST00000586863 ADCY9O60503 1353 aa19.04■□□□□ 0.64
ATG4D-206ENST00000586863 C10orf71Q711Q0 1435 aa19.03■□□□□ 0.64
ATG4D-206ENST00000586863 HMOX1P09601 288 aa19.03■□□□□ 0.64
ATG4D-206ENST00000586863 CC2D1BQ5T0F9 858 aaKnown RBP19.03■□□□□ 0.64
ATG4D-206ENST00000586863 MRC1P22897 1456 aa19.03■□□□□ 0.64
ATG4D-206ENST00000586863 SENP3-EIF4A1A0A087X0R7 540 aa19.02■□□□□ 0.64
ATG4D-206ENST00000586863 GYS1P13807 737 aa19.02■□□□□ 0.64
ATG4D-206ENST00000586863 AKAP4Q5JQC9 854 aa19.02■□□□□ 0.64
ATG4D-206ENST00000586863 ADAMTS7Q9UKP4 1686 aa19.01■□□□□ 0.63
ATG4D-206ENST00000586863 RFC4P35249 363 aa19.01■□□□□ 0.63
ATG4D-206ENST00000586863 CRKLP46109 303 aaKnown RBP19.01■□□□□ 0.63
ATG4D-206ENST00000586863 NLGN1Q8N2Q7 840 aa19.01■□□□□ 0.63
ATG4D-206ENST00000586863 COL3A1P02461 1466 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-206ENST00000586863 BRCA1P38398 1863 aaKnown RBP19.01■□□□□ 0.63
ATG4D-206ENST00000586863 LGR6Q9HBX8 967 aa19■□□□□ 0.63
ATG4D-206ENST00000586863 SLC52A2Q9HAB3 445 aa18.99■□□□□ 0.63
ATG4D-206ENST00000586863 DIAPH1O60610 1272 aaKnown RBP18.98■□□□□ 0.63
ATG4D-206ENST00000586863 SRP68Q9UHB9 627 aaKnown RBP18.98■□□□□ 0.63
ATG4D-206ENST00000586863 KCPQ6ZWJ8 1503 aa18.98■□□□□ 0.63
ATG4D-206ENST00000586863 RNMTO43148 476 aaKnown RBP18.97■□□□□ 0.63
ATG4D-206ENST00000586863 MTHFSDQ2M296 383 aaKnown RBP18.97■□□□□ 0.63
ATG4D-206ENST00000586863 CCDC87Q9NVE4 849 aa18.97■□□□□ 0.63
ATG4D-206ENST00000586863 USP42Q9H9J4 1324 aaKnown RBP18.97■□□□□ 0.63
ATG4D-206ENST00000586863 NPC1L1Q9UHC9 1359 aa18.96■□□□□ 0.63
ATG4D-206ENST00000586863 A0A0G2JLW4 131 aa18.96■□□□□ 0.63
ATG4D-206ENST00000586863 TGFB2P61812 414 aa18.96■□□□□ 0.63
ATG4D-206ENST00000586863 SLC39A6Q13433 755 aa18.96■□□□□ 0.63
ATG4D-206ENST00000586863 CNGB1Q14028 1251 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-206ENST00000586863 INTS5Q6P9B9 1019 aaKnown RBP18.96■□□□□ 0.63
ATG4D-206ENST00000586863 DNAJC10Q8IXB1 793 aa18.96■□□□□ 0.63
ATG4D-206ENST00000586863 PARP3Q9Y6F1 533 aa18.96■□□□□ 0.63
ATG4D-206ENST00000586863 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
ATG4D-206ENST00000586863 FKBP8Q14318 412 aa18.95■□□□□ 0.62
ATG4D-206ENST00000586863 ZNF526Q8TF50 670 aaPredicted RBP18.95■□□□□ 0.62
ATG4D-206ENST00000586863 DPEP1P16444 411 aa18.94■□□□□ 0.62
ATG4D-206ENST00000586863 DDR1Q08345 913 aa18.94■□□□□ 0.62
ATG4D-206ENST00000586863 GPBP1L1Q9HC44 474 aaPredicted RBP18.94■□□□□ 0.62
ATG4D-206ENST00000586863 ARFGEF1Q9Y6D6 1849 aa18.93■□□□□ 0.62
ATG4D-206ENST00000586863 BCS1LQ9Y276 419 aa18.93■□□□□ 0.62
ATG4D-206ENST00000586863 SOS1Q07889 1333 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-206ENST00000586863 SIPA1L3O60292 1781 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-206ENST00000586863 CYP19A1P11511 503 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-206ENST00000586863 AFDNP55196 1824 aaKnown RBP18.9■□□□□ 0.62
ATG4D-206ENST00000586863 U2SURPO15042 1029 aaKnown RBP18.9■□□□□ 0.62
ATG4D-206ENST00000586863 ZBTB1Q9Y2K1 713 aa18.9■□□□□ 0.62
ATG4D-206ENST00000586863 FCHSD2O94868 740 aa18.89■□□□□ 0.61
ATG4D-206ENST00000586863 KCNA3P22001 575 aa18.89■□□□□ 0.61
ATG4D-206ENST00000586863 USPL1Q5W0Q7 1092 aa18.89■□□□□ 0.61
ATG4D-206ENST00000586863 COL15A1P39059 1388 aa18.89■□□□□ 0.61
ATG4D-206ENST00000586863 POLRMTO00411 1230 aaKnown RBP18.88■□□□□ 0.61
ATG4D-206ENST00000586863 ZPR1O75312 459 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms