RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 KDRP35968 1356 aa26.57■■□□□ 1.84
TRAF4-216ENST00000586813 ATP6V1AP38606 617 aa26.56■■□□□ 1.84
TRAF4-216ENST00000586813 CCER1Q8TC90 406 aaPredicted RBP26.55■■□□□ 1.84
TRAF4-216ENST00000586813 GNPATO15228 680 aa26.54■■□□□ 1.84
TRAF4-216ENST00000586813 KDM6AO15550 1401 aaPredicted RBP26.53■■□□□ 1.84
TRAF4-216ENST00000586813 HSP90AB1P08238 724 aaKnown RBP26.52■■□□□ 1.84
TRAF4-216ENST00000586813 C1QTNF8P60827 252 aa26.52■■□□□ 1.84
TRAF4-216ENST00000586813 MORC1Q86VD1 984 aa26.52■■□□□ 1.84
TRAF4-216ENST00000586813 ERVV-2B6SEH9 535 aa26.51■■□□□ 1.83
TRAF4-216ENST00000586813 PLEKHO1Q53GL0 409 aaPredicted RBP26.51■■□□□ 1.83
TRAF4-216ENST00000586813 DCAF5Q96JK2 942 aa26.51■■□□□ 1.83
TRAF4-216ENST00000586813 KIF13BQ9NQT8 1826 aa26.5■■□□□ 1.83
TRAF4-216ENST00000586813 AMOTQ4VCS5 1084 aa26.49■■□□□ 1.83
TRAF4-216ENST00000586813 ZNF530Q6P9A1 599 aaPredicted RBP26.49■■□□□ 1.83
TRAF4-216ENST00000586813 AEBP1Q8IUX7 1158 aa26.49■■□□□ 1.83
TRAF4-216ENST00000586813 SCN11AQ9UI33 1791 aa26.48■■□□□ 1.83
TRAF4-216ENST00000586813 C4AP0C0L4 1744 aa26.48■■□□□ 1.83
TRAF4-216ENST00000586813 GIGYF1O75420 1035 aaPredicted RBP26.47■■□□□ 1.83
TRAF4-216ENST00000586813 SLC4A9Q96Q91 983 aa26.47■■□□□ 1.83
TRAF4-216ENST00000586813 KNSTRNQ9Y448 316 aa26.47■■□□□ 1.83
TRAF4-216ENST00000586813 KIAA1551Q9HCM1 1747 aa26.46■■□□□ 1.83
TRAF4-216ENST00000586813 RBM42Q9BTD8 480 aaKnown RBP26.46■■□□□ 1.83
TRAF4-216ENST00000586813 MYH14Q7Z406 1995 aaKnown RBP26.46■■□□□ 1.83
TRAF4-216ENST00000586813 VIRMAQ69YN4 1812 aaKnown RBP26.45■■□□□ 1.82
TRAF4-216ENST00000586813 CICQ96RK0 1608 aaPredicted RBP26.45■■□□□ 1.82
TRAF4-216ENST00000586813 SENP3-EIF4A1A0A087X0R7 540 aa26.44■■□□□ 1.82
TRAF4-216ENST00000586813 RTCBQ9Y3I0 505 aaKnown RBP26.44■■□□□ 1.82
TRAF4-216ENST00000586813 TJP1Q07157 1748 aa26.43■■□□□ 1.82
TRAF4-216ENST00000586813 ATP10DQ9P241 1426 aa26.43■■□□□ 1.82
TRAF4-216ENST00000586813 CABP4P57796 275 aa26.43■■□□□ 1.82
TRAF4-216ENST00000586813 C1orf141Q5JVX7 400 aa26.43■■□□□ 1.82
TRAF4-216ENST00000586813 SULT6B1Q6IMI4 303 aa26.43■■□□□ 1.82
TRAF4-216ENST00000586813 CNTNAP4Q9C0A0 1308 aa26.42■■□□□ 1.82
TRAF4-216ENST00000586813 MMP10P09238 476 aa26.42■■□□□ 1.82
TRAF4-216ENST00000586813 MTHFSP49914 203 aa26.42■■□□□ 1.82
TRAF4-216ENST00000586813 N4BP2Q86UW6 1770 aaPredicted RBP26.42■■□□□ 1.82
TRAF4-216ENST00000586813 IL13P35225 146 aa26.41■■□□□ 1.82
TRAF4-216ENST00000586813 AMER1Q5JTC6 1135 aaPredicted RBP26.41■■□□□ 1.82
TRAF4-216ENST00000586813 TRAPPC3LQ5T215 181 aa26.41■■□□□ 1.82
TRAF4-216ENST00000586813 RC3H1Q5TC82 1133 aaKnown RBP26.41■■□□□ 1.82
TRAF4-216ENST00000586813 ADCY9O60503 1353 aa26.41■■□□□ 1.82
TRAF4-216ENST00000586813 ADRA2BP18089 450 aa26.4■■□□□ 1.82
TRAF4-216ENST00000586813 WWC3Q9ULE0 1092 aa26.4■■□□□ 1.82
TRAF4-216ENST00000586813 KIF7Q2M1P5 1343 aa26.39■■□□□ 1.82
TRAF4-216ENST00000586813 PXDNLA1KZ92 1463 aa26.38■■□□□ 1.81
TRAF4-216ENST00000586813 NLGN1Q8N2Q7 840 aa26.37■■□□□ 1.81
TRAF4-216ENST00000586813 ARHGEF1Q92888 912 aaKnown RBP26.37■■□□□ 1.81
TRAF4-216ENST00000586813 C10orf71Q711Q0 1435 aa26.37■■□□□ 1.81
TRAF4-216ENST00000586813 BRCA1P38398 1863 aaKnown RBP26.36■■□□□ 1.81
TRAF4-216ENST00000586813 RPS6KA4O75676 772 aa26.36■■□□□ 1.81
TRAF4-216ENST00000586813 NFATC2IPQ8NCF5 419 aa26.36■■□□□ 1.81
TRAF4-216ENST00000586813 PTCD1O75127 700 aaKnown RBP26.35■■□□□ 1.81
TRAF4-216ENST00000586813 RFC4P35249 363 aa26.34■■□□□ 1.81
TRAF4-216ENST00000586813 MRC1P22897 1456 aa26.34■■□□□ 1.81
TRAF4-216ENST00000586813 GYS1P13807 737 aa26.33■■□□□ 1.81
TRAF4-216ENST00000586813 ADAMTS7Q9UKP4 1686 aa26.32■■□□□ 1.8
TRAF4-216ENST00000586813 CRKLP46109 303 aaKnown RBP26.31■■□□□ 1.8
TRAF4-216ENST00000586813 AKAP4Q5JQC9 854 aa26.31■■□□□ 1.8
TRAF4-216ENST00000586813 GPBP1L1Q9HC44 474 aaPredicted RBP26.31■■□□□ 1.8
TRAF4-216ENST00000586813 TGFB2P61812 414 aa26.3■■□□□ 1.8
TRAF4-216ENST00000586813 CCDC87Q9NVE4 849 aa26.29■■□□□ 1.8
TRAF4-216ENST00000586813 PER1O15534 1290 aaPredicted RBP26.28■■□□□ 1.8
TRAF4-216ENST00000586813 ARFGEF1Q9Y6D6 1849 aa26.28■■□□□ 1.8
TRAF4-216ENST00000586813 HMOX1P09601 288 aa26.27■■□□□ 1.8
TRAF4-216ENST00000586813 ZNF526Q8TF50 670 aaPredicted RBP26.27■■□□□ 1.8
TRAF4-216ENST00000586813 SLC52A2Q9HAB3 445 aa26.27■■□□□ 1.8
TRAF4-216ENST00000586813 PARP3Q9Y6F1 533 aa26.27■■□□□ 1.8
TRAF4-216ENST00000586813 UBR2Q8IWV8 1755 aa26.26■■□□□ 1.79
TRAF4-216ENST00000586813 USP42Q9H9J4 1324 aaKnown RBP26.26■■□□□ 1.79
TRAF4-216ENST00000586813 A0A0G2JLW4 131 aa26.26■■□□□ 1.79
TRAF4-216ENST00000586813 KCPQ6ZWJ8 1503 aa26.25■■□□□ 1.79
TRAF4-216ENST00000586813 CC2D1BQ5T0F9 858 aaKnown RBP26.25■■□□□ 1.79
TRAF4-216ENST00000586813 LGR6Q9HBX8 967 aa26.25■■□□□ 1.79
TRAF4-216ENST00000586813 SRP68Q9UHB9 627 aaKnown RBP26.25■■□□□ 1.79
TRAF4-216ENST00000586813 BCS1LQ9Y276 419 aa26.24■■□□□ 1.79
TRAF4-216ENST00000586813 COL3A1P02461 1466 aaPredicted RBP26.23■■□□□ 1.79
TRAF4-216ENST00000586813 DIAPH1O60610 1272 aaKnown RBP26.23■■□□□ 1.79
TRAF4-216ENST00000586813 INTS5Q6P9B9 1019 aaKnown RBP26.23■■□□□ 1.79
TRAF4-216ENST00000586813 CEP350Q5VT06 3117 aa26.23■■□□□ 1.79
TRAF4-216ENST00000586813 RNMTO43148 476 aaKnown RBP26.22■■□□□ 1.79
TRAF4-216ENST00000586813 DPEP1P16444 411 aa26.22■■□□□ 1.79
TRAF4-216ENST00000586813 FKBP8Q14318 412 aa26.22■■□□□ 1.79
TRAF4-216ENST00000586813 MTHFSDQ2M296 383 aaKnown RBP26.21■■□□□ 1.79
TRAF4-216ENST00000586813 DNAJC10Q8IXB1 793 aa26.21■■□□□ 1.79
TRAF4-216ENST00000586813 NPC1L1Q9UHC9 1359 aa26.2■■□□□ 1.79
TRAF4-216ENST00000586813 DDR1Q08345 913 aa26.19■■□□□ 1.78
TRAF4-216ENST00000586813 SLC39A6Q13433 755 aa26.19■■□□□ 1.78
TRAF4-216ENST00000586813 AFDNP55196 1824 aaKnown RBP26.18■■□□□ 1.78
TRAF4-216ENST00000586813 SOS1Q07889 1333 aaPredicted RBP26.18■■□□□ 1.78
TRAF4-216ENST00000586813 SIPA1L3O60292 1781 aaPredicted RBP26.18■■□□□ 1.78
TRAF4-216ENST00000586813 FCHSD2O94868 740 aa26.17■■□□□ 1.78
TRAF4-216ENST00000586813 CYP19A1P11511 503 aaPredicted RBP26.17■■□□□ 1.78
TRAF4-216ENST00000586813 KCNA3P22001 575 aa26.16■■□□□ 1.78
TRAF4-216ENST00000586813 NRXN2Q9P2S2 1712 aa26.16■■□□□ 1.78
TRAF4-216ENST00000586813 ARHGAP27Q6ZUM4 889 aa26.15■■□□□ 1.78
TRAF4-216ENST00000586813 POLRMTO00411 1230 aaKnown RBP26.14■■□□□ 1.78
TRAF4-216ENST00000586813 ZPR1O75312 459 aa26.14■■□□□ 1.78
TRAF4-216ENST00000586813 USPL1Q5W0Q7 1092 aa26.14■■□□□ 1.78
TRAF4-216ENST00000586813 COL15A1P39059 1388 aa26.14■■□□□ 1.78
TRAF4-216ENST00000586813 DLEC1Q9Y238 1755 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms