RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 BRCA1P38398 1863 aaKnown RBP20.78■□□□□ 0.92
SF3A2-202ENST00000586396 ZNF831Q5JPB2 1677 aa20.78■□□□□ 0.92
SF3A2-202ENST00000586396 KIF3CO14782 793 aa20.78■□□□□ 0.92
SF3A2-202ENST00000586396 ATP6V1AP38606 617 aa20.78■□□□□ 0.92
SF3A2-202ENST00000586396 MMP10P09238 476 aa20.77■□□□□ 0.92
SF3A2-202ENST00000586396 ITPK1Q13572 414 aa20.77■□□□□ 0.92
SF3A2-202ENST00000586396 ASAP1Q9ULH1 1129 aa20.77■□□□□ 0.92
SF3A2-202ENST00000586396 C4AP0C0L4 1744 aa20.77■□□□□ 0.92
SF3A2-202ENST00000586396 C10orf71Q711Q0 1435 aa20.76■□□□□ 0.91
SF3A2-202ENST00000586396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.75■□□□□ 0.91
SF3A2-202ENST00000586396 KDRP35968 1356 aa20.74■□□□□ 0.91
SF3A2-202ENST00000586396 PHKG2P15735 406 aa20.74■□□□□ 0.91
SF3A2-202ENST00000586396 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
SF3A2-202ENST00000586396 CCER1Q8TC90 406 aaPredicted RBP20.74■□□□□ 0.91
SF3A2-202ENST00000586396 CARD14Q9BXL6 1004 aa20.74■□□□□ 0.91
SF3A2-202ENST00000586396 WASHC2AQ641Q2 1341 aa20.74■□□□□ 0.91
SF3A2-202ENST00000586396 ARFGEF1Q9Y6D6 1849 aa20.74■□□□□ 0.91
SF3A2-202ENST00000586396 EYA1Q99502 592 aa20.73■□□□□ 0.91
SF3A2-202ENST00000586396 BCS1LQ9Y276 419 aa20.73■□□□□ 0.91
SF3A2-202ENST00000586396 WDR90Q96KV7 1748 aa20.73■□□□□ 0.91
SF3A2-202ENST00000586396 APLP1P51693 650 aa20.72■□□□□ 0.91
SF3A2-202ENST00000586396 RTCBQ9Y3I0 505 aaKnown RBP20.72■□□□□ 0.91
SF3A2-202ENST00000586396 TGFB2P61812 414 aa20.71■□□□□ 0.91
SF3A2-202ENST00000586396 EIF4G2P78344 907 aaKnown RBP eCLIP20.71■□□□□ 0.91
SF3A2-202ENST00000586396 ATG3Q9NT62 314 aa20.71■□□□□ 0.91
SF3A2-202ENST00000586396 PLEKHG2Q9H7P9 1386 aa20.71■□□□□ 0.91
SF3A2-202ENST00000586396 TOMM70O94826 608 aa20.69■□□□□ 0.9
SF3A2-202ENST00000586396 TRAPPC3LQ5T215 181 aa20.69■□□□□ 0.9
SF3A2-202ENST00000586396 NLGN1Q8N2Q7 840 aa20.69■□□□□ 0.9
SF3A2-202ENST00000586396 A0A0G2JLW4 131 aa20.68■□□□□ 0.9
SF3A2-202ENST00000586396 RBM42Q9BTD8 480 aaKnown RBP20.68■□□□□ 0.9
SF3A2-202ENST00000586396 CCDC87Q9NVE4 849 aa20.68■□□□□ 0.9
SF3A2-202ENST00000586396 MYH14Q7Z406 1995 aaKnown RBP20.68■□□□□ 0.9
SF3A2-202ENST00000586396 ADRA2BP18089 450 aa20.67■□□□□ 0.9
SF3A2-202ENST00000586396 FCHSD2O94868 740 aa20.66■□□□□ 0.9
SF3A2-202ENST00000586396 EIF4A2Q14240 407 aaKnown RBP20.66■□□□□ 0.9
SF3A2-202ENST00000586396 ARHGAP27Q6ZUM4 889 aa20.66■□□□□ 0.9
SF3A2-202ENST00000586396 POLKQ9UBT6 870 aa20.66■□□□□ 0.9
SF3A2-202ENST00000586396 CNTNAP4Q9C0A0 1308 aa20.66■□□□□ 0.9
SF3A2-202ENST00000586396 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
SF3A2-202ENST00000586396 RFC4P35249 363 aa20.65■□□□□ 0.9
SF3A2-202ENST00000586396 NMRK2Q9NPI5 230 aa20.65■□□□□ 0.9
SF3A2-202ENST00000586396 PARP3Q9Y6F1 533 aa20.65■□□□□ 0.9
SF3A2-202ENST00000586396 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.9
SF3A2-202ENST00000586396 ERVV-2B6SEH9 535 aa20.64■□□□□ 0.89
SF3A2-202ENST00000586396 GYS1P13807 737 aa20.64■□□□□ 0.89
SF3A2-202ENST00000586396 DPEP1P16444 411 aa20.64■□□□□ 0.89
SF3A2-202ENST00000586396 ARHGEF1Q92888 912 aaKnown RBP20.64■□□□□ 0.89
SF3A2-202ENST00000586396 SLC4A9Q96Q91 983 aa20.64■□□□□ 0.89
SF3A2-202ENST00000586396 TJP1Q07157 1748 aa20.64■□□□□ 0.89
SF3A2-202ENST00000586396 KDM6AO15550 1401 aaPredicted RBP20.63■□□□□ 0.89
SF3A2-202ENST00000586396 HSP90AB1P08238 724 aaKnown RBP20.63■□□□□ 0.89
SF3A2-202ENST00000586396 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
SF3A2-202ENST00000586396 RC3H1Q5TC82 1133 aaKnown RBP20.63■□□□□ 0.89
SF3A2-202ENST00000586396 DCAF5Q96JK2 942 aa20.63■□□□□ 0.89
SF3A2-202ENST00000586396 C16orf71Q8IYS4 520 aaPredicted RBP20.62■□□□□ 0.89
SF3A2-202ENST00000586396 KCPQ6ZWJ8 1503 aa20.6■□□□□ 0.89
SF3A2-202ENST00000586396 RPS6KA4O75676 772 aa20.6■□□□□ 0.89
SF3A2-202ENST00000586396 C9orf131Q5VYM1 1079 aa20.6■□□□□ 0.89
SF3A2-202ENST00000586396 SBF1O95248 1867 aa20.59■□□□□ 0.89
SF3A2-202ENST00000586396 CABP4P57796 275 aa20.59■□□□□ 0.89
SF3A2-202ENST00000586396 ZNF530Q6P9A1 599 aaPredicted RBP20.59■□□□□ 0.89
SF3A2-202ENST00000586396 DNAJC5GQ8N7S2 189 aa20.59■□□□□ 0.89
SF3A2-202ENST00000586396 RBM46Q8TBY0 533 aaKnown RBP20.59■□□□□ 0.89
SF3A2-202ENST00000586396 POLR3GLQ9BT43 218 aa20.58■□□□□ 0.89
SF3A2-202ENST00000586396 SCN11AQ9UI33 1791 aa20.58■□□□□ 0.89
SF3A2-202ENST00000586396 PTCD1O75127 700 aaKnown RBP20.57■□□□□ 0.88
SF3A2-202ENST00000586396 PLEKHO1Q53GL0 409 aaPredicted RBP20.57■□□□□ 0.88
SF3A2-202ENST00000586396 PIM2Q9P1W9 311 aa20.57■□□□□ 0.88
SF3A2-202ENST00000586396 KDM2BQ8NHM5 1336 aa20.56■□□□□ 0.88
SF3A2-202ENST00000586396 KCNA3P22001 575 aa20.56■□□□□ 0.88
SF3A2-202ENST00000586396 ADAMTS7Q9UKP4 1686 aa20.56■□□□□ 0.88
SF3A2-202ENST00000586396 USP42Q9H9J4 1324 aaKnown RBP20.55■□□□□ 0.88
SF3A2-202ENST00000586396 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
SF3A2-202ENST00000586396 CRKLP46109 303 aaKnown RBP20.55■□□□□ 0.88
SF3A2-202ENST00000586396 DALRD3Q5D0E6 543 aaKnown RBP20.55■□□□□ 0.88
SF3A2-202ENST00000586396 C1orf141Q5JVX7 400 aa20.55■□□□□ 0.88
SF3A2-202ENST00000586396 RNF181Q9P0P0 153 aa20.55■□□□□ 0.88
SF3A2-202ENST00000586396 SRP68Q9UHB9 627 aaKnown RBP20.55■□□□□ 0.88
SF3A2-202ENST00000586396 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
SF3A2-202ENST00000586396 DLEC1Q9Y238 1755 aa20.54■□□□□ 0.88
SF3A2-202ENST00000586396 TIAM2Q8IVF5 1701 aa20.53■□□□□ 0.88
SF3A2-202ENST00000586396 AFDNP55196 1824 aaKnown RBP20.53■□□□□ 0.88
SF3A2-202ENST00000586396 MTHFSP49914 203 aa20.53■□□□□ 0.88
SF3A2-202ENST00000586396 HTRA3P83110 453 aa20.53■□□□□ 0.88
SF3A2-202ENST00000586396 FSTL1Q12841 308 aa20.53■□□□□ 0.88
SF3A2-202ENST00000586396 DDR1Q08345 913 aa20.52■□□□□ 0.88
SF3A2-202ENST00000586396 FKBP8Q14318 412 aa20.52■□□□□ 0.88
SF3A2-202ENST00000586396 KLRG1Q96E93 195 aa20.52■□□□□ 0.88
SF3A2-202ENST00000586396 CHRNA5P30532 468 aa20.5■□□□□ 0.87
SF3A2-202ENST00000586396 AEBP1Q8IUX7 1158 aa20.5■□□□□ 0.87
SF3A2-202ENST00000586396 NFATC2IPQ8NCF5 419 aa20.5■□□□□ 0.87
SF3A2-202ENST00000586396 PANK3Q9H999 370 aa20.5■□□□□ 0.87
SF3A2-202ENST00000586396 NRXN2Q9P2S2 1712 aa20.49■□□□□ 0.87
SF3A2-202ENST00000586396 KIF7Q2M1P5 1343 aa20.49■□□□□ 0.87
SF3A2-202ENST00000586396 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
SF3A2-202ENST00000586396 RRAGCQ9HB90 399 aa20.48■□□□□ 0.87
SF3A2-202ENST00000586396 JMYQ8N9B5 988 aa20.47■□□□□ 0.87
SF3A2-202ENST00000586396 CCDC88AQ3V6T2 1871 aa20.47■□□□□ 0.87
SF3A2-202ENST00000586396 MRC1P22897 1456 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1457.8 ms