RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 PHF14O94880 888 aa23.14■■□□□ 1.29
MBD3-204ENST00000585967 KDRP35968 1356 aa23.14■■□□□ 1.29
MBD3-204ENST00000585967 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.13■■□□□ 1.29
MBD3-204ENST00000585967 ASAP1Q9ULH1 1129 aa23.13■■□□□ 1.29
MBD3-204ENST00000585967 GOLGB1Q14789 3259 aaKnown RBP23.13■■□□□ 1.29
MBD3-204ENST00000585967 GNPATO15228 680 aa23.12■■□□□ 1.29
MBD3-204ENST00000585967 GRIN3BO60391 1043 aa23.12■■□□□ 1.29
MBD3-204ENST00000585967 CD2APQ9Y5K6 639 aa23.12■■□□□ 1.29
MBD3-204ENST00000585967 MTHFSP49914 203 aa23.11■■□□□ 1.29
MBD3-204ENST00000585967 CABP4P57796 275 aa23.11■■□□□ 1.29
MBD3-204ENST00000585967 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
MBD3-204ENST00000585967 SULT6B1Q6IMI4 303 aa23.11■■□□□ 1.29
MBD3-204ENST00000585967 LINC00116Q8NCU8 138 aa23.11■■□□□ 1.29
MBD3-204ENST00000585967 ATG3Q9NT62 314 aa23.11■■□□□ 1.29
MBD3-204ENST00000585967 CICQ96RK0 1608 aaPredicted RBP23.11■■□□□ 1.29
MBD3-204ENST00000585967 KDM6AO15550 1401 aaPredicted RBP23.1■■□□□ 1.29
MBD3-204ENST00000585967 NLGN2Q8NFZ4 835 aa23.09■■□□□ 1.29
MBD3-204ENST00000585967 ZNF784Q8NCA9 323 aaPredicted RBP23.08■■□□□ 1.29
MBD3-204ENST00000585967 RBM42Q9BTD8 480 aaKnown RBP23.08■■□□□ 1.29
MBD3-204ENST00000585967 RTCBQ9Y3I0 505 aaKnown RBP23.08■■□□□ 1.29
MBD3-204ENST00000585967 C4AP0C0L4 1744 aa23.08■■□□□ 1.28
MBD3-204ENST00000585967 IL13P35225 146 aa23.07■■□□□ 1.28
MBD3-204ENST00000585967 AEBP1Q8IUX7 1158 aa23.07■■□□□ 1.28
MBD3-204ENST00000585967 KIF13BQ9NQT8 1826 aa23.06■■□□□ 1.28
MBD3-204ENST00000585967 ADRA2BP18089 450 aa23.06■■□□□ 1.28
MBD3-204ENST00000585967 ITPK1Q13572 414 aa23.06■■□□□ 1.28
MBD3-204ENST00000585967 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
MBD3-204ENST00000585967 NPC1L1Q9UHC9 1359 aa23.05■■□□□ 1.28
MBD3-204ENST00000585967 CNTNAP4Q9C0A0 1308 aa23.05■■□□□ 1.28
MBD3-204ENST00000585967 TRAPPC3LQ5T215 181 aa23.04■■□□□ 1.28
MBD3-204ENST00000585967 RC3H1Q5TC82 1133 aaKnown RBP23.04■■□□□ 1.28
MBD3-204ENST00000585967 TJP1Q07157 1748 aa23.04■■□□□ 1.28
MBD3-204ENST00000585967 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
MBD3-204ENST00000585967 DIAPH1O60610 1272 aaKnown RBP23.02■■□□□ 1.28
MBD3-204ENST00000585967 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
MBD3-204ENST00000585967 MRC1P22897 1456 aa23■■□□□ 1.27
MBD3-204ENST00000585967 AMIGO3Q86WK7 504 aa23■■□□□ 1.27
MBD3-204ENST00000585967 NLGN1Q8N2Q7 840 aa23■■□□□ 1.27
MBD3-204ENST00000585967 ADAMTS7Q9UKP4 1686 aa23■■□□□ 1.27
MBD3-204ENST00000585967 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
MBD3-204ENST00000585967 RFC4P35249 363 aa22.99■■□□□ 1.27
MBD3-204ENST00000585967 NFATC2IPQ8NCF5 419 aa22.99■■□□□ 1.27
MBD3-204ENST00000585967 PTCD1O75127 700 aaKnown RBP22.97■■□□□ 1.27
MBD3-204ENST00000585967 RPS6KA4O75676 772 aa22.97■■□□□ 1.27
MBD3-204ENST00000585967 YBX3P16989 372 aaKnown RBP eCLIP22.97■■□□□ 1.27
MBD3-204ENST00000585967 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
MBD3-204ENST00000585967 UBR2Q8IWV8 1755 aa22.96■■□□□ 1.27
MBD3-204ENST00000585967 MMP10P09238 476 aa22.96■■□□□ 1.27
MBD3-204ENST00000585967 HMOX1P09601 288 aa22.96■■□□□ 1.27
MBD3-204ENST00000585967 SLC4A9Q96Q91 983 aa22.95■■□□□ 1.26
MBD3-204ENST00000585967 SLC52A2Q9HAB3 445 aa22.95■■□□□ 1.26
MBD3-204ENST00000585967 SMIM5Q71RC9 77 aa22.94■■□□□ 1.26
MBD3-204ENST00000585967 BRCA1P38398 1863 aaKnown RBP22.94■■□□□ 1.26
MBD3-204ENST00000585967 COL3A1P02461 1466 aaPredicted RBP22.93■■□□□ 1.26
MBD3-204ENST00000585967 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
MBD3-204ENST00000585967 CCDC87Q9NVE4 849 aa22.93■■□□□ 1.26
MBD3-204ENST00000585967 KIAA1551Q9HCM1 1747 aa22.93■■□□□ 1.26
MBD3-204ENST00000585967 GIGYF1O75420 1035 aaPredicted RBP22.92■■□□□ 1.26
MBD3-204ENST00000585967 CRKLP46109 303 aaKnown RBP22.92■■□□□ 1.26
MBD3-204ENST00000585967 ARHGEF1Q92888 912 aaKnown RBP22.92■■□□□ 1.26
MBD3-204ENST00000585967 PARP3Q9Y6F1 533 aa22.92■■□□□ 1.26
MBD3-204ENST00000585967 SIPA1L3O60292 1781 aaPredicted RBP22.91■■□□□ 1.26
MBD3-204ENST00000585967 U2SURPO15042 1029 aaKnown RBP22.91■■□□□ 1.26
MBD3-204ENST00000585967 ARFGEF1Q9Y6D6 1849 aa22.91■■□□□ 1.26
MBD3-204ENST00000585967 C10orf71Q711Q0 1435 aa22.91■■□□□ 1.26
MBD3-204ENST00000585967 RNMTO43148 476 aaKnown RBP22.9■■□□□ 1.26
MBD3-204ENST00000585967 GAS2L2Q8NHY3 880 aa22.9■■□□□ 1.26
MBD3-204ENST00000585967 GYS1P13807 737 aa22.89■■□□□ 1.25
MBD3-204ENST00000585967 TGFB2P61812 414 aa22.89■■□□□ 1.25
MBD3-204ENST00000585967 PXDNLA1KZ92 1463 aa22.88■■□□□ 1.25
MBD3-204ENST00000585967 CNGB1Q14028 1251 aaPredicted RBP22.88■■□□□ 1.25
MBD3-204ENST00000585967 MTHFSDQ2M296 383 aaKnown RBP22.88■■□□□ 1.25
MBD3-204ENST00000585967 TTC5Q8N0Z6 440 aa22.88■■□□□ 1.25
MBD3-204ENST00000585967 KCPQ6ZWJ8 1503 aa22.87■■□□□ 1.25
MBD3-204ENST00000585967 USP42Q9H9J4 1324 aaKnown RBP22.87■■□□□ 1.25
MBD3-204ENST00000585967 ATP10DQ9P241 1426 aa22.86■■□□□ 1.25
MBD3-204ENST00000585967 ZPR1O75312 459 aa22.86■■□□□ 1.25
MBD3-204ENST00000585967 C1QTNF8P60827 252 aa22.86■■□□□ 1.25
MBD3-204ENST00000585967 TEFQ10587 303 aa22.86■■□□□ 1.25
MBD3-204ENST00000585967 VSIG10Q8N0Z9 540 aa22.86■■□□□ 1.25
MBD3-204ENST00000585967 LGR6Q9HBX8 967 aa22.86■■□□□ 1.25
MBD3-204ENST00000585967 NUDCQ9Y266 331 aa22.86■■□□□ 1.25
MBD3-204ENST00000585967 GNAT3A8MTJ3 354 aa22.84■■□□□ 1.25
MBD3-204ENST00000585967 AFDNP55196 1824 aaKnown RBP22.83■■□□□ 1.25
MBD3-204ENST00000585967 DNAJC10Q8IXB1 793 aa22.83■■□□□ 1.25
MBD3-204ENST00000585967 COL15A1P39059 1388 aa22.82■■□□□ 1.24
MBD3-204ENST00000585967 GPBP1L1Q9HC44 474 aaPredicted RBP22.82■■□□□ 1.24
MBD3-204ENST00000585967 ADCY9O60503 1353 aa22.81■■□□□ 1.24
MBD3-204ENST00000585967 SLC39A6Q13433 755 aa22.81■■□□□ 1.24
MBD3-204ENST00000585967 WWC3Q9ULE0 1092 aa22.81■■□□□ 1.24
MBD3-204ENST00000585967 SOS1Q07889 1333 aaPredicted RBP22.81■■□□□ 1.24
MBD3-204ENST00000585967 STARD3NLO95772 234 aa22.8■■□□□ 1.24
MBD3-204ENST00000585967 INTS5Q6P9B9 1019 aaKnown RBP22.8■■□□□ 1.24
MBD3-204ENST00000585967 BCS1LQ9Y276 419 aa22.8■■□□□ 1.24
MBD3-204ENST00000585967 SENP3-EIF4A1A0A087X0R7 540 aa22.79■■□□□ 1.24
MBD3-204ENST00000585967 CYP19A1P11511 503 aaPredicted RBP22.79■■□□□ 1.24
MBD3-204ENST00000585967 TEX13AQ9BXU3 409 aaPredicted RBP22.79■■□□□ 1.24
MBD3-204ENST00000585967 DLEC1Q9Y238 1755 aa22.78■■□□□ 1.24
MBD3-204ENST00000585967 SCN7AQ01118 1682 aa22.78■■□□□ 1.24
MBD3-204ENST00000585967 NPM2Q86SE8 214 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms