RNA–Protein interactions for RNA: ENST00000585728.5

GFAP-206, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-206ENST00000585728 ATG3Q9NT62 314 aa17.49■□□□□ 0.39
GFAP-206ENST00000585728 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
GFAP-206ENST00000585728 GRIN3BO60391 1043 aa17.48■□□□□ 0.39
GFAP-206ENST00000585728 YBX3P16989 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
GFAP-206ENST00000585728 PLEKHO1Q53GL0 409 aaPredicted RBP17.48■□□□□ 0.39
GFAP-206ENST00000585728 KDRP35968 1356 aa17.48■□□□□ 0.39
GFAP-206ENST00000585728 SCN11AQ9UI33 1791 aa17.48■□□□□ 0.39
GFAP-206ENST00000585728 AMOTQ4VCS5 1084 aa17.47■□□□□ 0.39
GFAP-206ENST00000585728 SMIM5Q71RC9 77 aa17.47■□□□□ 0.39
GFAP-206ENST00000585728 DCAF5Q96JK2 942 aa17.47■□□□□ 0.39
GFAP-206ENST00000585728 KNSTRNQ9Y448 316 aa17.47■□□□□ 0.39
GFAP-206ENST00000585728 GNPATO15228 680 aa17.46■□□□□ 0.39
GFAP-206ENST00000585728 KIF13BQ9NQT8 1826 aa17.46■□□□□ 0.39
GFAP-206ENST00000585728 KDM6AO15550 1401 aaPredicted RBP17.46■□□□□ 0.39
GFAP-206ENST00000585728 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
GFAP-206ENST00000585728 MYH14Q7Z406 1995 aaKnown RBP17.45■□□□□ 0.38
GFAP-206ENST00000585728 AEBP1Q8IUX7 1158 aa17.44■□□□□ 0.38
GFAP-206ENST00000585728 SLC4A9Q96Q91 983 aa17.43■□□□□ 0.38
GFAP-206ENST00000585728 C4AP0C0L4 1744 aa17.43■□□□□ 0.38
GFAP-206ENST00000585728 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
GFAP-206ENST00000585728 IL13P35225 146 aa17.42■□□□□ 0.38
GFAP-206ENST00000585728 CABP4P57796 275 aa17.42■□□□□ 0.38
GFAP-206ENST00000585728 AMER1Q5JTC6 1135 aaPredicted RBP17.42■□□□□ 0.38
GFAP-206ENST00000585728 SULT6B1Q6IMI4 303 aa17.42■□□□□ 0.38
GFAP-206ENST00000585728 RBM42Q9BTD8 480 aaKnown RBP17.42■□□□□ 0.38
GFAP-206ENST00000585728 KIF7Q2M1P5 1343 aa17.42■□□□□ 0.38
GFAP-206ENST00000585728 MTHFSP49914 203 aa17.41■□□□□ 0.38
GFAP-206ENST00000585728 C1QTNF8P60827 252 aa17.41■□□□□ 0.38
GFAP-206ENST00000585728 C1orf141Q5JVX7 400 aa17.41■□□□□ 0.38
GFAP-206ENST00000585728 RC3H1Q5TC82 1133 aaKnown RBP17.41■□□□□ 0.38
GFAP-206ENST00000585728 RTCBQ9Y3I0 505 aaKnown RBP17.41■□□□□ 0.38
GFAP-206ENST00000585728 TJP1Q07157 1748 aa17.41■□□□□ 0.38
GFAP-206ENST00000585728 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
GFAP-206ENST00000585728 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
GFAP-206ENST00000585728 CNTNAP4Q9C0A0 1308 aa17.4■□□□□ 0.38
GFAP-206ENST00000585728 N4BP2Q86UW6 1770 aaPredicted RBP17.4■□□□□ 0.38
GFAP-206ENST00000585728 ADRA2BP18089 450 aa17.39■□□□□ 0.37
GFAP-206ENST00000585728 PER1O15534 1290 aaPredicted RBP17.37■□□□□ 0.37
GFAP-206ENST00000585728 GIGYF1O75420 1035 aaPredicted RBP17.37■□□□□ 0.37
GFAP-206ENST00000585728 RPS6KA4O75676 772 aa17.37■□□□□ 0.37
GFAP-206ENST00000585728 MMP10P09238 476 aa17.37■□□□□ 0.37
GFAP-206ENST00000585728 NLGN1Q8N2Q7 840 aa17.37■□□□□ 0.37
GFAP-206ENST00000585728 NFATC2IPQ8NCF5 419 aa17.37■□□□□ 0.37
GFAP-206ENST00000585728 ARHGEF1Q92888 912 aaKnown RBP17.37■□□□□ 0.37
GFAP-206ENST00000585728 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
GFAP-206ENST00000585728 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
GFAP-206ENST00000585728 AKAP4Q5JQC9 854 aa17.35■□□□□ 0.37
GFAP-206ENST00000585728 ATP10DQ9P241 1426 aa17.35■□□□□ 0.37
GFAP-206ENST00000585728 PTCD1O75127 700 aaKnown RBP17.34■□□□□ 0.37
GFAP-206ENST00000585728 RFC4P35249 363 aa17.34■□□□□ 0.37
GFAP-206ENST00000585728 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
GFAP-206ENST00000585728 PXDNLA1KZ92 1463 aa17.33■□□□□ 0.37
GFAP-206ENST00000585728 MRC1P22897 1456 aa17.33■□□□□ 0.37
GFAP-206ENST00000585728 C10orf71Q711Q0 1435 aa17.33■□□□□ 0.36
GFAP-206ENST00000585728 ADCY9O60503 1353 aa17.33■□□□□ 0.36
GFAP-206ENST00000585728 SENP3-EIF4A1A0A087X0R7 540 aa17.33■□□□□ 0.36
GFAP-206ENST00000585728 GYS1P13807 737 aa17.33■□□□□ 0.36
GFAP-206ENST00000585728 CRKLP46109 303 aaKnown RBP17.32■□□□□ 0.36
GFAP-206ENST00000585728 TGFB2P61812 414 aa17.32■□□□□ 0.36
GFAP-206ENST00000585728 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
GFAP-206ENST00000585728 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
GFAP-206ENST00000585728 HMOX1P09601 288 aa17.31■□□□□ 0.36
GFAP-206ENST00000585728 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
GFAP-206ENST00000585728 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
GFAP-206ENST00000585728 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
GFAP-206ENST00000585728 UBR2Q8IWV8 1755 aa17.3■□□□□ 0.36
GFAP-206ENST00000585728 NPC1L1Q9UHC9 1359 aa17.3■□□□□ 0.36
GFAP-206ENST00000585728 RNMTO43148 476 aaKnown RBP17.3■□□□□ 0.36
GFAP-206ENST00000585728 DIAPH1O60610 1272 aaKnown RBP17.3■□□□□ 0.36
GFAP-206ENST00000585728 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
GFAP-206ENST00000585728 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
GFAP-206ENST00000585728 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
GFAP-206ENST00000585728 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
GFAP-206ENST00000585728 GPBP1L1Q9HC44 474 aaPredicted RBP17.28■□□□□ 0.36
GFAP-206ENST00000585728 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
GFAP-206ENST00000585728 USP42Q9H9J4 1324 aaKnown RBP17.27■□□□□ 0.36
GFAP-206ENST00000585728 INTS5Q6P9B9 1019 aaKnown RBP17.27■□□□□ 0.36
GFAP-206ENST00000585728 SIPA1L3O60292 1781 aaPredicted RBP17.27■□□□□ 0.35
GFAP-206ENST00000585728 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
GFAP-206ENST00000585728 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
GFAP-206ENST00000585728 DNAJC10Q8IXB1 793 aa17.26■□□□□ 0.35
GFAP-206ENST00000585728 SRP68Q9UHB9 627 aaKnown RBP17.26■□□□□ 0.35
GFAP-206ENST00000585728 DPEP1P16444 411 aa17.25■□□□□ 0.35
GFAP-206ENST00000585728 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
GFAP-206ENST00000585728 FKBP8Q14318 412 aa17.25■□□□□ 0.35
GFAP-206ENST00000585728 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
GFAP-206ENST00000585728 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
GFAP-206ENST00000585728 NRXN2Q9P2S2 1712 aa17.24■□□□□ 0.35
GFAP-206ENST00000585728 SOS1Q07889 1333 aaPredicted RBP17.23■□□□□ 0.35
GFAP-206ENST00000585728 DDR1Q08345 913 aa17.23■□□□□ 0.35
GFAP-206ENST00000585728 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
GFAP-206ENST00000585728 ZNF526Q8TF50 670 aaPredicted RBP17.23■□□□□ 0.35
GFAP-206ENST00000585728 KCNA3P22001 575 aa17.22■□□□□ 0.35
GFAP-206ENST00000585728 TM4SF1P30408 202 aa17.22■□□□□ 0.35
GFAP-206ENST00000585728 SBF1O95248 1867 aa17.21■□□□□ 0.35
GFAP-206ENST00000585728 ZPR1O75312 459 aa17.21■□□□□ 0.35
GFAP-206ENST00000585728 FCHSD2O94868 740 aa17.21■□□□□ 0.35
GFAP-206ENST00000585728 USPL1Q5W0Q7 1092 aa17.21■□□□□ 0.35
GFAP-206ENST00000585728 DLEC1Q9Y238 1755 aa17.2■□□□□ 0.34
GFAP-206ENST00000585728 COL15A1P39059 1388 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms