RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 MAP2P11137 1827 aaKnown RBP19.93■□□□□ 0.78
SDF2-202ENST00000585428 DCAF5Q96JK2 942 aa19.93■□□□□ 0.78
SDF2-202ENST00000585428 POLR3GLQ9BT43 218 aa19.93■□□□□ 0.78
SDF2-202ENST00000585428 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
SDF2-202ENST00000585428 EIF4G2P78344 907 aaKnown RBP eCLIP19.91■□□□□ 0.78
SDF2-202ENST00000585428 PLEKHO1Q53GL0 409 aaPredicted RBP19.91■□□□□ 0.78
SDF2-202ENST00000585428 TRAPPC3LQ5T215 181 aa19.91■□□□□ 0.78
SDF2-202ENST00000585428 RC3H1Q5TC82 1133 aaKnown RBP19.91■□□□□ 0.78
SDF2-202ENST00000585428 PCGF6Q9BYE7 350 aa19.91■□□□□ 0.78
SDF2-202ENST00000585428 ATP10DQ9P241 1426 aa19.91■□□□□ 0.78
SDF2-202ENST00000585428 HSP90AB1P08238 724 aaKnown RBP19.9■□□□□ 0.78
SDF2-202ENST00000585428 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
SDF2-202ENST00000585428 UBR3Q6ZT12 1888 aa19.9■□□□□ 0.78
SDF2-202ENST00000585428 ADCY9O60503 1353 aa19.89■□□□□ 0.77
SDF2-202ENST00000585428 MMP10P09238 476 aa19.89■□□□□ 0.77
SDF2-202ENST00000585428 AMOTQ4VCS5 1084 aa19.89■□□□□ 0.77
SDF2-202ENST00000585428 NLGN1Q8N2Q7 840 aa19.89■□□□□ 0.77
SDF2-202ENST00000585428 ARHGEF1Q92888 912 aaKnown RBP19.89■□□□□ 0.77
SDF2-202ENST00000585428 GPBP1L1Q9HC44 474 aaPredicted RBP19.89■□□□□ 0.77
SDF2-202ENST00000585428 RTCBQ9Y3I0 505 aaKnown RBP19.89■□□□□ 0.77
SDF2-202ENST00000585428 RBM42Q9BTD8 480 aaKnown RBP19.88■□□□□ 0.77
SDF2-202ENST00000585428 KDRP35968 1356 aa19.87■□□□□ 0.77
SDF2-202ENST00000585428 RPS6KA4O75676 772 aa19.87■□□□□ 0.77
SDF2-202ENST00000585428 TGFB2P61812 414 aa19.87■□□□□ 0.77
SDF2-202ENST00000585428 WWC3Q9ULE0 1092 aa19.87■□□□□ 0.77
SDF2-202ENST00000585428 CEP350Q5VT06 3117 aa19.87■□□□□ 0.77
SDF2-202ENST00000585428 CABP4P57796 275 aa19.86■□□□□ 0.77
SDF2-202ENST00000585428 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
SDF2-202ENST00000585428 CNTNAP4Q9C0A0 1308 aa19.84■□□□□ 0.77
SDF2-202ENST00000585428 GYS1P13807 737 aa19.84■□□□□ 0.77
SDF2-202ENST00000585428 MTHFSP49914 203 aa19.84■□□□□ 0.77
SDF2-202ENST00000585428 MORC1Q86VD1 984 aa19.84■□□□□ 0.77
SDF2-202ENST00000585428 AEBP1Q8IUX7 1158 aa19.84■□□□□ 0.77
SDF2-202ENST00000585428 NFATC2IPQ8NCF5 419 aa19.84■□□□□ 0.77
SDF2-202ENST00000585428 A0A0G2JLW4 131 aa19.83■□□□□ 0.77
SDF2-202ENST00000585428 KDM6AO15550 1401 aaPredicted RBP19.83■□□□□ 0.76
SDF2-202ENST00000585428 IL13P35225 146 aa19.82■□□□□ 0.76
SDF2-202ENST00000585428 RFC4P35249 363 aa19.82■□□□□ 0.76
SDF2-202ENST00000585428 ZNF526Q8TF50 670 aaPredicted RBP19.82■□□□□ 0.76
SDF2-202ENST00000585428 SULT6B1Q6IMI4 303 aa19.81■□□□□ 0.76
SDF2-202ENST00000585428 PTCD1O75127 700 aaKnown RBP19.8■□□□□ 0.76
SDF2-202ENST00000585428 KCNA3P22001 575 aa19.8■□□□□ 0.76
SDF2-202ENST00000585428 C1orf141Q5JVX7 400 aa19.8■□□□□ 0.76
SDF2-202ENST00000585428 PXDNLA1KZ92 1463 aa19.79■□□□□ 0.76
SDF2-202ENST00000585428 KIF3CO14782 793 aa19.79■□□□□ 0.76
SDF2-202ENST00000585428 ZNF831Q5JPB2 1677 aa19.78■□□□□ 0.76
SDF2-202ENST00000585428 DPEP1P16444 411 aa19.78■□□□□ 0.76
SDF2-202ENST00000585428 HSPA6P17066 643 aa19.78■□□□□ 0.76
SDF2-202ENST00000585428 CRKLP46109 303 aaKnown RBP19.78■□□□□ 0.76
SDF2-202ENST00000585428 CCDC87Q9NVE4 849 aa19.78■□□□□ 0.76
SDF2-202ENST00000585428 BCS1LQ9Y276 419 aa19.78■□□□□ 0.76
SDF2-202ENST00000585428 KNSTRNQ9Y448 316 aa19.78■□□□□ 0.76
SDF2-202ENST00000585428 PARP3Q9Y6F1 533 aa19.78■□□□□ 0.76
SDF2-202ENST00000585428 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
SDF2-202ENST00000585428 INTS5Q6P9B9 1019 aaKnown RBP19.76■□□□□ 0.75
SDF2-202ENST00000585428 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
SDF2-202ENST00000585428 AKAP4Q5JQC9 854 aa19.75■□□□□ 0.75
SDF2-202ENST00000585428 ARHGAP27Q6ZUM4 889 aa19.75■□□□□ 0.75
SDF2-202ENST00000585428 LGR6Q9HBX8 967 aa19.75■□□□□ 0.75
SDF2-202ENST00000585428 FKBP8Q14318 412 aa19.74■□□□□ 0.75
SDF2-202ENST00000585428 SRP68Q9UHB9 627 aaKnown RBP19.74■□□□□ 0.75
SDF2-202ENST00000585428 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
SDF2-202ENST00000585428 TM4SF1P30408 202 aa19.73■□□□□ 0.75
SDF2-202ENST00000585428 USP42Q9H9J4 1324 aaKnown RBP19.73■□□□□ 0.75
SDF2-202ENST00000585428 KIF13BQ9NQT8 1826 aa19.72■□□□□ 0.75
SDF2-202ENST00000585428 FCHSD2O94868 740 aa19.72■□□□□ 0.75
SDF2-202ENST00000585428 SLC52A2Q9HAB3 445 aa19.72■□□□□ 0.75
SDF2-202ENST00000585428 PER1O15534 1290 aaPredicted RBP19.71■□□□□ 0.75
SDF2-202ENST00000585428 DDR1Q08345 913 aa19.71■□□□□ 0.75
SDF2-202ENST00000585428 IFFO2Q5TF58 517 aa19.71■□□□□ 0.75
SDF2-202ENST00000585428 PIM2Q9P1W9 311 aa19.71■□□□□ 0.75
SDF2-202ENST00000585428 COL5A3P25940 1745 aaPredicted RBP19.7■□□□□ 0.74
SDF2-202ENST00000585428 KIAA1551Q9HCM1 1747 aa19.7■□□□□ 0.74
SDF2-202ENST00000585428 MYH14Q7Z406 1995 aaKnown RBP19.7■□□□□ 0.74
SDF2-202ENST00000585428 RNMTO43148 476 aaKnown RBP19.69■□□□□ 0.74
SDF2-202ENST00000585428 TOMM70O94826 608 aa19.69■□□□□ 0.74
SDF2-202ENST00000585428 CYP19A1P11511 503 aaPredicted RBP19.69■□□□□ 0.74
SDF2-202ENST00000585428 DNAJC10Q8IXB1 793 aa19.69■□□□□ 0.74
SDF2-202ENST00000585428 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
SDF2-202ENST00000585428 POLRMTO00411 1230 aaKnown RBP19.68■□□□□ 0.74
SDF2-202ENST00000585428 C4AP0C0L4 1744 aa19.68■□□□□ 0.74
SDF2-202ENST00000585428 SLC39A6Q13433 755 aa19.67■□□□□ 0.74
SDF2-202ENST00000585428 MTHFSDQ2M296 383 aaKnown RBP19.67■□□□□ 0.74
SDF2-202ENST00000585428 DALRD3Q5D0E6 543 aaKnown RBP19.67■□□□□ 0.74
SDF2-202ENST00000585428 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
SDF2-202ENST00000585428 N4BP2Q86UW6 1770 aaPredicted RBP19.66■□□□□ 0.74
SDF2-202ENST00000585428 ZPR1O75312 459 aa19.66■□□□□ 0.74
SDF2-202ENST00000585428 HMOX1P09601 288 aa19.66■□□□□ 0.74
SDF2-202ENST00000585428 C9orf131Q5VYM1 1079 aa19.66■□□□□ 0.74
SDF2-202ENST00000585428 USPL1Q5W0Q7 1092 aa19.66■□□□□ 0.74
SDF2-202ENST00000585428 CHRNA5P30532 468 aa19.65■□□□□ 0.74
SDF2-202ENST00000585428 DNAJC5GQ8N7S2 189 aa19.65■□□□□ 0.74
SDF2-202ENST00000585428 NMRK2Q9NPI5 230 aa19.65■□□□□ 0.74
SDF2-202ENST00000585428 SOS1Q07889 1333 aaPredicted RBP19.65■□□□□ 0.74
SDF2-202ENST00000585428 VSIG10Q8N0Z9 540 aa19.64■□□□□ 0.73
SDF2-202ENST00000585428 NARFQ9UHQ1 456 aa19.64■□□□□ 0.73
SDF2-202ENST00000585428 DIAPH1O60610 1272 aaKnown RBP19.63■□□□□ 0.73
SDF2-202ENST00000585428 APLP1P51693 650 aa19.63■□□□□ 0.73
SDF2-202ENST00000585428 NFIXQ14938 502 aa19.62■□□□□ 0.73
SDF2-202ENST00000585428 BCL2L12Q9HB09 334 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms