RNA–Protein interactions for RNA: ENST00000585375.1

GHDC-204, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-204ENST00000585375 C1orf141Q5JVX7 400 aa21.74■■□□□ 1.07
GHDC-204ENST00000585375 SSFA2P28290 1259 aa21.73■■□□□ 1.07
GHDC-204ENST00000585375 ATP6V1AP38606 617 aa21.72■■□□□ 1.07
GHDC-204ENST00000585375 CC2D1BQ5T0F9 858 aaKnown RBP21.72■■□□□ 1.07
GHDC-204ENST00000585375 LINC00116Q8NCU8 138 aa21.72■■□□□ 1.07
GHDC-204ENST00000585375 CABP4P57796 275 aa21.71■■□□□ 1.07
GHDC-204ENST00000585375 ITPK1Q13572 414 aa21.7■■□□□ 1.06
GHDC-204ENST00000585375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.69■■□□□ 1.06
GHDC-204ENST00000585375 DIAPH1O60610 1272 aaKnown RBP21.69■■□□□ 1.06
GHDC-204ENST00000585375 KLHL34Q8N239 644 aa21.69■■□□□ 1.06
GHDC-204ENST00000585375 SCN11AQ9UI33 1791 aa21.69■■□□□ 1.06
GHDC-204ENST00000585375 AKAP4Q5JQC9 854 aa21.68■■□□□ 1.06
GHDC-204ENST00000585375 MSL1Q68DK7 614 aa21.68■■□□□ 1.06
GHDC-204ENST00000585375 AMIGO3Q86WK7 504 aa21.68■■□□□ 1.06
GHDC-204ENST00000585375 COL5A3P25940 1745 aaPredicted RBP21.66■■□□□ 1.06
GHDC-204ENST00000585375 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
GHDC-204ENST00000585375 GNPATO15228 680 aa21.66■■□□□ 1.06
GHDC-204ENST00000585375 PHF14O94880 888 aa21.66■■□□□ 1.06
GHDC-204ENST00000585375 CHD4Q14839 1912 aa21.66■■□□□ 1.06
GHDC-204ENST00000585375 CICQ96RK0 1608 aaPredicted RBP21.66■■□□□ 1.06
GHDC-204ENST00000585375 RC3H1Q5TC82 1133 aaKnown RBP21.65■■□□□ 1.06
GHDC-204ENST00000585375 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
GHDC-204ENST00000585375 RBM42Q9BTD8 480 aaKnown RBP21.65■■□□□ 1.06
GHDC-204ENST00000585375 CD2APQ9Y5K6 639 aa21.65■■□□□ 1.06
GHDC-204ENST00000585375 CNTNAP4Q9C0A0 1308 aa21.64■■□□□ 1.05
GHDC-204ENST00000585375 GPR162Q16538 588 aa21.64■■□□□ 1.05
GHDC-204ENST00000585375 NFATC2IPQ8NCF5 419 aa21.64■■□□□ 1.05
GHDC-204ENST00000585375 MRC1P22897 1456 aa21.64■■□□□ 1.05
GHDC-204ENST00000585375 HMOX1P09601 288 aa21.63■■□□□ 1.05
GHDC-204ENST00000585375 ADRA2BP18089 450 aa21.63■■□□□ 1.05
GHDC-204ENST00000585375 NLGN2Q8NFZ4 835 aa21.63■■□□□ 1.05
GHDC-204ENST00000585375 RTCBQ9Y3I0 505 aaKnown RBP21.63■■□□□ 1.05
GHDC-204ENST00000585375 ADAMTS7Q9UKP4 1686 aa21.62■■□□□ 1.05
GHDC-204ENST00000585375 SLC52A2Q9HAB3 445 aa21.61■■□□□ 1.05
GHDC-204ENST00000585375 RPS6KA4O75676 772 aa21.59■■□□□ 1.05
GHDC-204ENST00000585375 TRAPPC3LQ5T215 181 aa21.59■■□□□ 1.05
GHDC-204ENST00000585375 SMIM5Q71RC9 77 aa21.59■■□□□ 1.05
GHDC-204ENST00000585375 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
GHDC-204ENST00000585375 RNMTO43148 476 aaKnown RBP21.58■■□□□ 1.05
GHDC-204ENST00000585375 PTCD1O75127 700 aaKnown RBP21.58■■□□□ 1.05
GHDC-204ENST00000585375 MTHFSDQ2M296 383 aaKnown RBP21.58■■□□□ 1.05
GHDC-204ENST00000585375 TJP1Q07157 1748 aa21.58■■□□□ 1.04
GHDC-204ENST00000585375 GRIN3BO60391 1043 aa21.57■■□□□ 1.04
GHDC-204ENST00000585375 CFAP53Q96M91 514 aa21.57■■□□□ 1.04
GHDC-204ENST00000585375 U2SURPO15042 1029 aaKnown RBP21.56■■□□□ 1.04
GHDC-204ENST00000585375 NLGN1Q8N2Q7 840 aa21.56■■□□□ 1.04
GHDC-204ENST00000585375 LGR6Q9HBX8 967 aa21.56■■□□□ 1.04
GHDC-204ENST00000585375 UTRNP46939 3433 aa21.56■■□□□ 1.04
GHDC-204ENST00000585375 MYH14Q7Z406 1995 aaKnown RBP21.56■■□□□ 1.04
GHDC-204ENST00000585375 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
GHDC-204ENST00000585375 CRKLP46109 303 aaKnown RBP21.54■■□□□ 1.04
GHDC-204ENST00000585375 CNGB1Q14028 1251 aaPredicted RBP21.54■■□□□ 1.04
GHDC-204ENST00000585375 GAS2L2Q8NHY3 880 aa21.54■■□□□ 1.04
GHDC-204ENST00000585375 ARHGEF1Q92888 912 aaKnown RBP21.54■■□□□ 1.04
GHDC-204ENST00000585375 C4AP0C0L4 1744 aa21.54■■□□□ 1.04
GHDC-204ENST00000585375 RFC4P35249 363 aa21.53■■□□□ 1.04
GHDC-204ENST00000585375 ZNF784Q8NCA9 323 aaPredicted RBP21.53■■□□□ 1.04
GHDC-204ENST00000585375 KCPQ6ZWJ8 1503 aa21.52■■□□□ 1.04
GHDC-204ENST00000585375 MMP10P09238 476 aa21.52■■□□□ 1.04
GHDC-204ENST00000585375 YBX3P16989 372 aaKnown RBP eCLIP21.52■■□□□ 1.044e-6■■□□□ 13.6
GHDC-204ENST00000585375 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
GHDC-204ENST00000585375 KIF13BQ9NQT8 1826 aa21.51■■□□□ 1.03
GHDC-204ENST00000585375 GNAT3A8MTJ3 354 aa21.5■■□□□ 1.03
GHDC-204ENST00000585375 GYS1P13807 737 aa21.5■■□□□ 1.03
GHDC-204ENST00000585375 PPP2R1AP30153 589 aa21.5■■□□□ 1.03
GHDC-204ENST00000585375 VSIG10Q8N0Z9 540 aa21.5■■□□□ 1.03
GHDC-204ENST00000585375 UBR2Q8IWV8 1755 aa21.5■■□□□ 1.03
GHDC-204ENST00000585375 INTS5Q6P9B9 1019 aaKnown RBP21.48■■□□□ 1.03
GHDC-204ENST00000585375 DNAJC10Q8IXB1 793 aa21.48■■□□□ 1.03
GHDC-204ENST00000585375 RSPH6AQ9H0K4 717 aa21.48■■□□□ 1.03
GHDC-204ENST00000585375 CCDC87Q9NVE4 849 aa21.48■■□□□ 1.03
GHDC-204ENST00000585375 GOLGB1Q14789 3259 aaKnown RBP21.48■■□□□ 1.03
GHDC-204ENST00000585375 C10orf71Q711Q0 1435 aa21.47■■□□□ 1.03
GHDC-204ENST00000585375 SLC39A6Q13433 755 aa21.47■■□□□ 1.03
GHDC-204ENST00000585375 USP42Q9H9J4 1324 aaKnown RBP21.47■■□□□ 1.03
GHDC-204ENST00000585375 SIPA1L3O60292 1781 aaPredicted RBP21.46■■□□□ 1.03
GHDC-204ENST00000585375 CYP19A1P11511 503 aaPredicted RBP21.46■■□□□ 1.03
GHDC-204ENST00000585375 PRKAR2BP31323 418 aa21.46■■□□□ 1.03
GHDC-204ENST00000585375 TEFQ10587 303 aa21.46■■□□□ 1.03
GHDC-204ENST00000585375 TTC5Q8N0Z6 440 aa21.46■■□□□ 1.03
GHDC-204ENST00000585375 CEMIPQ8WUJ3 1361 aa21.46■■□□□ 1.03
GHDC-204ENST00000585375 TGFB2P61812 414 aa21.45■■□□□ 1.02
GHDC-204ENST00000585375 IL17REQ8NFR9 667 aa21.45■■□□□ 1.02
GHDC-204ENST00000585375 FCHSD2O94868 740 aa21.44■■□□□ 1.02
GHDC-204ENST00000585375 PARP3Q9Y6F1 533 aa21.44■■□□□ 1.02
GHDC-204ENST00000585375 SOS1Q07889 1333 aaPredicted RBP21.44■■□□□ 1.02
GHDC-204ENST00000585375 PXDNLA1KZ92 1463 aa21.44■■□□□ 1.02
GHDC-204ENST00000585375 KIAA1551Q9HCM1 1747 aa21.43■■□□□ 1.02
GHDC-204ENST00000585375 U2AF1L5P0DN76 240 aaPredicted RBP21.42■■□□□ 1.02
GHDC-204ENST00000585375 U2AF1Q01081 240 aaKnown RBP eCLIP21.42■■□□□ 1.02
GHDC-204ENST00000585375 ZNF790Q6PG37 636 aa21.42■■□□□ 1.02
GHDC-204ENST00000585375 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
GHDC-204ENST00000585375 TEX13AQ9BXU3 409 aaPredicted RBP21.41■■□□□ 1.02
GHDC-204ENST00000585375 SRP68Q9UHB9 627 aaKnown RBP21.41■■□□□ 1.02
GHDC-204ENST00000585375 COL15A1P39059 1388 aa21.4■■□□□ 1.02
GHDC-204ENST00000585375 ZPR1O75312 459 aa21.4■■□□□ 1.02
GHDC-204ENST00000585375 STARD3NLO95772 234 aa21.4■■□□□ 1.02
GHDC-204ENST00000585375 FKBP8Q14318 412 aa21.4■■□□□ 1.02
GHDC-204ENST00000585375 HEG1Q9ULI3 1381 aa21.39■■□□□ 1.02
GHDC-204ENST00000585375 ZBTB1Q9Y2K1 713 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms