RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 MMP10P09238 476 aa14.35□□□□□ -0.11
CASC3-210ENST00000584997 HSPA6P17066 643 aa14.35□□□□□ -0.11
CASC3-210ENST00000584997 TNNT2P45379 298 aaPredicted RBP14.35□□□□□ -0.11
CASC3-210ENST00000584997 ATG3Q9NT62 314 aa14.35□□□□□ -0.11
CASC3-210ENST00000584997 EIF4A2Q14240 407 aaKnown RBP14.34□□□□□ -0.11
CASC3-210ENST00000584997 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
CASC3-210ENST00000584997 RTCBQ9Y3I0 505 aaKnown RBP14.34□□□□□ -0.11
CASC3-210ENST00000584997 N4BP2Q86UW6 1770 aaPredicted RBP14.34□□□□□ -0.11
CASC3-210ENST00000584997 KIF13BQ9NQT8 1826 aa14.34□□□□□ -0.11
CASC3-210ENST00000584997 PLEKHG2Q9H7P9 1386 aa14.34□□□□□ -0.11
CASC3-210ENST00000584997 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.11
CASC3-210ENST00000584997 TRAPPC3LQ5T215 181 aa14.33□□□□□ -0.12
CASC3-210ENST00000584997 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.12
CASC3-210ENST00000584997 KDRP35968 1356 aa14.33□□□□□ -0.12
CASC3-210ENST00000584997 ZNF831Q5JPB2 1677 aa14.33□□□□□ -0.12
CASC3-210ENST00000584997 PXDNLA1KZ92 1463 aa14.32□□□□□ -0.12
CASC3-210ENST00000584997 NLGN1Q8N2Q7 840 aa14.32□□□□□ -0.12
CASC3-210ENST00000584997 COL5A3P25940 1745 aaPredicted RBP14.32□□□□□ -0.12
CASC3-210ENST00000584997 KIAA1551Q9HCM1 1747 aa14.32□□□□□ -0.12
CASC3-210ENST00000584997 ERVV-2B6SEH9 535 aa14.31□□□□□ -0.12
CASC3-210ENST00000584997 HSP90AB1P08238 724 aaKnown RBP14.31□□□□□ -0.12
CASC3-210ENST00000584997 DCAF5Q96JK2 942 aa14.31□□□□□ -0.12
CASC3-210ENST00000584997 BCS1LQ9Y276 419 aa14.31□□□□□ -0.12
CASC3-210ENST00000584997 C10orf71Q711Q0 1435 aa14.31□□□□□ -0.12
CASC3-210ENST00000584997 C4AP0C0L4 1744 aa14.3□□□□□ -0.12
CASC3-210ENST00000584997 ADRA2BP18089 450 aa14.3□□□□□ -0.12
CASC3-210ENST00000584997 TGFB2P61812 414 aa14.3□□□□□ -0.12
CASC3-210ENST00000584997 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
CASC3-210ENST00000584997 TIMELESSQ9UNS1 1208 aa14.3□□□□□ -0.12
CASC3-210ENST00000584997 A0A0G2JLW4 131 aa14.29□□□□□ -0.12
CASC3-210ENST00000584997 KIF3CO14782 793 aa14.29□□□□□ -0.12
CASC3-210ENST00000584997 RFC4P35249 363 aa14.29□□□□□ -0.12
CASC3-210ENST00000584997 ZNF530Q6P9A1 599 aaPredicted RBP14.29□□□□□ -0.12
CASC3-210ENST00000584997 ARHGEF1Q92888 912 aaKnown RBP14.29□□□□□ -0.12
CASC3-210ENST00000584997 SLC4A9Q96Q91 983 aa14.29□□□□□ -0.12
CASC3-210ENST00000584997 CCDC87Q9NVE4 849 aa14.29□□□□□ -0.12
CASC3-210ENST00000584997 PARP3Q9Y6F1 533 aa14.29□□□□□ -0.12
CASC3-210ENST00000584997 CNTNAP4Q9C0A0 1308 aa14.29□□□□□ -0.12
CASC3-210ENST00000584997 MYH14Q7Z406 1995 aaKnown RBP14.29□□□□□ -0.12
CASC3-210ENST00000584997 CABP4P57796 275 aa14.28□□□□□ -0.12
CASC3-210ENST00000584997 AMOTQ4VCS5 1084 aa14.28□□□□□ -0.12
CASC3-210ENST00000584997 RC3H1Q5TC82 1133 aaKnown RBP14.28□□□□□ -0.12
CASC3-210ENST00000584997 BRCA1P38398 1863 aaKnown RBP14.27□□□□□ -0.12
CASC3-210ENST00000584997 KDM6AO15550 1401 aaPredicted RBP14.27□□□□□ -0.12
CASC3-210ENST00000584997 RPS6KA4O75676 772 aa14.27□□□□□ -0.13
CASC3-210ENST00000584997 GYS1P13807 737 aa14.27□□□□□ -0.13
CASC3-210ENST00000584997 C1orf141Q5JVX7 400 aa14.27□□□□□ -0.13
CASC3-210ENST00000584997 ARHGAP27Q6ZUM4 889 aa14.27□□□□□ -0.13
CASC3-210ENST00000584997 PTCD1O75127 700 aaKnown RBP14.26□□□□□ -0.13
CASC3-210ENST00000584997 FCHSD2O94868 740 aa14.26□□□□□ -0.13
CASC3-210ENST00000584997 DPEP1P16444 411 aa14.26□□□□□ -0.13
CASC3-210ENST00000584997 ARFGEF1Q9Y6D6 1849 aa14.25□□□□□ -0.13
CASC3-210ENST00000584997 MTHFSP49914 203 aa14.25□□□□□ -0.13
CASC3-210ENST00000584997 PANK3Q9H999 370 aa14.25□□□□□ -0.13
CASC3-210ENST00000584997 CRKLP46109 303 aaKnown RBP14.24□□□□□ -0.13
CASC3-210ENST00000584997 TOMM70O94826 608 aa14.23□□□□□ -0.13
CASC3-210ENST00000584997 APLP1P51693 650 aa14.23□□□□□ -0.13
CASC3-210ENST00000584997 MORC1Q86VD1 984 aa14.23□□□□□ -0.13
CASC3-210ENST00000584997 AEBP1Q8IUX7 1158 aa14.23□□□□□ -0.13
CASC3-210ENST00000584997 SCN11AQ9UI33 1791 aa14.22□□□□□ -0.13
CASC3-210ENST00000584997 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
CASC3-210ENST00000584997 TJP1Q07157 1748 aa14.22□□□□□ -0.13
CASC3-210ENST00000584997 EIF4G2P78344 907 aaKnown RBP eCLIP14.22□□□□□ -0.13
CASC3-210ENST00000584997 NFATC2IPQ8NCF5 419 aa14.22□□□□□ -0.13
CASC3-210ENST00000584997 PIM2Q9P1W9 311 aa14.22□□□□□ -0.13
CASC3-210ENST00000584997 HSPA5P11021 654 aaKnown RBP14.21□□□□□ -0.13
CASC3-210ENST00000584997 C9orf131Q5VYM1 1079 aa14.21□□□□□ -0.13
CASC3-210ENST00000584997 SULT6B1Q6IMI4 303 aa14.21□□□□□ -0.13
CASC3-210ENST00000584997 C16orf71Q8IYS4 520 aaPredicted RBP14.21□□□□□ -0.13
CASC3-210ENST00000584997 NMRK2Q9NPI5 230 aa14.21□□□□□ -0.13
CASC3-210ENST00000584997 SRP68Q9UHB9 627 aaKnown RBP14.21□□□□□ -0.13
CASC3-210ENST00000584997 USP42Q9H9J4 1324 aaKnown RBP14.2□□□□□ -0.14
CASC3-210ENST00000584997 KCNA3P22001 575 aa14.2□□□□□ -0.14
CASC3-210ENST00000584997 FKBP8Q14318 412 aa14.2□□□□□ -0.14
CASC3-210ENST00000584997 DALRD3Q5D0E6 543 aaKnown RBP14.2□□□□□ -0.14
CASC3-210ENST00000584997 VIRMAQ69YN4 1812 aaKnown RBP14.19□□□□□ -0.14
CASC3-210ENST00000584997 WDR90Q96KV7 1748 aa14.18□□□□□ -0.14
CASC3-210ENST00000584997 ZPR1O75312 459 aa14.18□□□□□ -0.14
CASC3-210ENST00000584997 DDR1Q08345 913 aa14.18□□□□□ -0.14
CASC3-210ENST00000584997 KNSTRNQ9Y448 316 aa14.18□□□□□ -0.14
CASC3-210ENST00000584997 KDM2BQ8NHM5 1336 aa14.17□□□□□ -0.14
CASC3-210ENST00000584997 AKAP4Q5JQC9 854 aa14.17□□□□□ -0.14
CASC3-210ENST00000584997 RBM46Q8TBY0 533 aaKnown RBP14.17□□□□□ -0.14
CASC3-210ENST00000584997 RNF181Q9P0P0 153 aa14.17□□□□□ -0.14
CASC3-210ENST00000584997 ADAMTS7Q9UKP4 1686 aa14.17□□□□□ -0.14
CASC3-210ENST00000584997 SBF1O95248 1867 aa14.16□□□□□ -0.14
CASC3-210ENST00000584997 KCPQ6ZWJ8 1503 aa14.16□□□□□ -0.14
CASC3-210ENST00000584997 POLRMTO00411 1230 aaKnown RBP14.16□□□□□ -0.14
CASC3-210ENST00000584997 CHRNA5P30532 468 aa14.16□□□□□ -0.14
CASC3-210ENST00000584997 IL13P35225 146 aa14.16□□□□□ -0.14
CASC3-210ENST00000584997 DNAJC10Q8IXB1 793 aa14.16□□□□□ -0.14
CASC3-210ENST00000584997 SLC52A2Q9HAB3 445 aa14.16□□□□□ -0.14
CASC3-210ENST00000584997 TNRC6CQ9HCJ0 1690 aaKnown RBP14.16□□□□□ -0.14
CASC3-210ENST00000584997 USPL1Q5W0Q7 1092 aa14.15□□□□□ -0.14
CASC3-210ENST00000584997 INTS5Q6P9B9 1019 aaKnown RBP14.15□□□□□ -0.14
CASC3-210ENST00000584997 AFDNP55196 1824 aaKnown RBP14.15□□□□□ -0.14
CASC3-210ENST00000584997 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.15
CASC3-210ENST00000584997 DNAJC5GQ8N7S2 189 aa14.14□□□□□ -0.15
CASC3-210ENST00000584997 MRC1P22897 1456 aa14.13□□□□□ -0.15
CASC3-210ENST00000584997 COL15A1P39059 1388 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms