RNA–Protein interactions for RNA: ENST00000584995.5

SLC46A1-206, Transcript of solute carrier family 46 member 1, humanhuman

TSL 3

Gene SLC46A1, Length 1,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-206ENST00000584995 HSP90AB1P08238 724 aaKnown RBP23.38■■□□□ 1.33
SLC46A1-206ENST00000584995 CABP4P57796 275 aa23.38■■□□□ 1.33
SLC46A1-206ENST00000584995 RBM42Q9BTD8 480 aaKnown RBP23.38■■□□□ 1.33
SLC46A1-206ENST00000584995 MAP3K5Q99683 1374 aa23.38■■□□□ 1.33
SLC46A1-206ENST00000584995 QSER1Q2KHR3 1735 aa23.37■■□□□ 1.33
SLC46A1-206ENST00000584995 C1orf141Q5JVX7 400 aa23.37■■□□□ 1.33
SLC46A1-206ENST00000584995 C5P01031 1676 aa23.36■■□□□ 1.33
SLC46A1-206ENST00000584995 GNPATO15228 680 aa23.35■■□□□ 1.33
SLC46A1-206ENST00000584995 HMOX1P09601 288 aa23.35■■□□□ 1.33
SLC46A1-206ENST00000584995 SLC4A9Q96Q91 983 aa23.34■■□□□ 1.33
SLC46A1-206ENST00000584995 NFATC2IPQ8NCF5 419 aa23.33■■□□□ 1.33
SLC46A1-206ENST00000584995 C4BP0C0L5 1744 aa23.33■■□□□ 1.32
SLC46A1-206ENST00000584995 KDM6AO15550 1401 aaPredicted RBP23.33■■□□□ 1.32
SLC46A1-206ENST00000584995 PLEKHG2Q9H7P9 1386 aa23.31■■□□□ 1.32
SLC46A1-206ENST00000584995 SSFA2P28290 1259 aa23.31■■□□□ 1.32
SLC46A1-206ENST00000584995 DIAPH1O60610 1272 aaKnown RBP23.3■■□□□ 1.32
SLC46A1-206ENST00000584995 PTCD1O75127 700 aaKnown RBP23.3■■□□□ 1.32
SLC46A1-206ENST00000584995 KDRP35968 1356 aa23.29■■□□□ 1.32
SLC46A1-206ENST00000584995 TAF1LQ8IZX4 1826 aa23.29■■□□□ 1.32
SLC46A1-206ENST00000584995 UTRNP46939 3433 aa23.28■■□□□ 1.32
SLC46A1-206ENST00000584995 LGR6Q9HBX8 967 aa23.28■■□□□ 1.32
SLC46A1-206ENST00000584995 COL24A1Q17RW2 1714 aa23.27■■□□□ 1.32
SLC46A1-206ENST00000584995 YBX3P16989 372 aaKnown RBP eCLIP23.26■■□□□ 1.31
SLC46A1-206ENST00000584995 AKAP4Q5JQC9 854 aa23.26■■□□□ 1.31
SLC46A1-206ENST00000584995 TRAPPC3LQ5T215 181 aa23.26■■□□□ 1.31
SLC46A1-206ENST00000584995 ZNF784Q8NCA9 323 aaPredicted RBP23.26■■□□□ 1.31
SLC46A1-206ENST00000584995 RTCBQ9Y3I0 505 aaKnown RBP23.26■■□□□ 1.31
SLC46A1-206ENST00000584995 CD2APQ9Y5K6 639 aa23.25■■□□□ 1.31
SLC46A1-206ENST00000584995 U2SURPO15042 1029 aaKnown RBP23.24■■□□□ 1.31
SLC46A1-206ENST00000584995 MTHFSDQ2M296 383 aaKnown RBP23.24■■□□□ 1.31
SLC46A1-206ENST00000584995 WWC3Q9ULE0 1092 aa23.24■■□□□ 1.31
SLC46A1-206ENST00000584995 ARHGEF1Q92888 912 aaKnown RBP23.23■■□□□ 1.31
SLC46A1-206ENST00000584995 RC3H1Q5TC82 1133 aaKnown RBP23.21■■□□□ 1.31
SLC46A1-206ENST00000584995 UBR3Q6ZT12 1888 aa23.2■■□□□ 1.3
SLC46A1-206ENST00000584995 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
SLC46A1-206ENST00000584995 RPS6KA4O75676 772 aa23.2■■□□□ 1.3
SLC46A1-206ENST00000584995 MMP10P09238 476 aa23.2■■□□□ 1.3
SLC46A1-206ENST00000584995 SLC39A6Q13433 755 aa23.2■■□□□ 1.3
SLC46A1-206ENST00000584995 SLC52A2Q9HAB3 445 aa23.2■■□□□ 1.3
SLC46A1-206ENST00000584995 NPC1L1Q9UHC9 1359 aa23.19■■□□□ 1.3
SLC46A1-206ENST00000584995 CNTNAP4Q9C0A0 1308 aa23.19■■□□□ 1.3
SLC46A1-206ENST00000584995 RFC4P35249 363 aa23.19■■□□□ 1.3
SLC46A1-206ENST00000584995 GRIN3BO60391 1043 aa23.18■■□□□ 1.3
SLC46A1-206ENST00000584995 CRKLP46109 303 aaKnown RBP23.18■■□□□ 1.3
SLC46A1-206ENST00000584995 DNAJC10Q8IXB1 793 aa23.16■■□□□ 1.3
SLC46A1-206ENST00000584995 NLGN1Q8N2Q7 840 aa23.16■■□□□ 1.3
SLC46A1-206ENST00000584995 ADRA2BP18089 450 aa23.15■■□□□ 1.3
SLC46A1-206ENST00000584995 GYS1P13807 737 aa23.14■■□□□ 1.29
SLC46A1-206ENST00000584995 SRP68Q9UHB9 627 aaKnown RBP23.14■■□□□ 1.29
SLC46A1-206ENST00000584995 GOLGB1Q14789 3259 aaKnown RBP23.13■■□□□ 1.29
SLC46A1-206ENST00000584995 INTS5Q6P9B9 1019 aaKnown RBP23.13■■□□□ 1.29
SLC46A1-206ENST00000584995 COL3A1P02461 1466 aaPredicted RBP23.12■■□□□ 1.29
SLC46A1-206ENST00000584995 CFAP53Q96M91 514 aa23.12■■□□□ 1.29
SLC46A1-206ENST00000584995 PPP2R1AP30153 589 aa23.1■■□□□ 1.29
SLC46A1-206ENST00000584995 IL17REQ8NFR9 667 aa23.1■■□□□ 1.29
SLC46A1-206ENST00000584995 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
SLC46A1-206ENST00000584995 PARP3Q9Y6F1 533 aa23.1■■□□□ 1.29
SLC46A1-206ENST00000584995 FKBP8Q14318 412 aa23.09■■□□□ 1.29
SLC46A1-206ENST00000584995 CCDC87Q9NVE4 849 aa23.09■■□□□ 1.29
SLC46A1-206ENST00000584995 A0A0G2JLW4 131 aa23.08■■□□□ 1.29
SLC46A1-206ENST00000584995 GNAT3A8MTJ3 354 aa23.08■■□□□ 1.29
SLC46A1-206ENST00000584995 CYP19A1P11511 503 aaPredicted RBP23.08■■□□□ 1.29
SLC46A1-206ENST00000584995 PRKAR2BP31323 418 aa23.08■■□□□ 1.29
SLC46A1-206ENST00000584995 GAS2L2Q8NHY3 880 aa23.08■■□□□ 1.29
SLC46A1-206ENST00000584995 SCN11AQ9UI33 1791 aa23.07■■□□□ 1.28
SLC46A1-206ENST00000584995 ZNF831Q5JPB2 1677 aa23.07■■□□□ 1.28
SLC46A1-206ENST00000584995 CHD4Q14839 1912 aa23.06■■□□□ 1.28
SLC46A1-206ENST00000584995 COL5A3P25940 1745 aaPredicted RBP23.06■■□□□ 1.28
SLC46A1-206ENST00000584995 U2AF1L5P0DN76 240 aaPredicted RBP23.06■■□□□ 1.28
SLC46A1-206ENST00000584995 U2AF1Q01081 240 aaKnown RBP eCLIP23.06■■□□□ 1.28
SLC46A1-206ENST00000584995 TEFQ10587 303 aa23.06■■□□□ 1.28
SLC46A1-206ENST00000584995 NUDCQ9Y266 331 aa23.06■■□□□ 1.28
SLC46A1-206ENST00000584995 TTC5Q8N0Z6 440 aa23.05■■□□□ 1.28
SLC46A1-206ENST00000584995 RSPH6AQ9H0K4 717 aa23.05■■□□□ 1.28
SLC46A1-206ENST00000584995 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
SLC46A1-206ENST00000584995 USP42Q9H9J4 1324 aaKnown RBP23.05■■□□□ 1.28
SLC46A1-206ENST00000584995 CICQ96RK0 1608 aaPredicted RBP23.04■■□□□ 1.28
SLC46A1-206ENST00000584995 ZPR1O75312 459 aa23.04■■□□□ 1.28
SLC46A1-206ENST00000584995 USPL1Q5W0Q7 1092 aa23.04■■□□□ 1.28
SLC46A1-206ENST00000584995 MRC1P22897 1456 aa23.04■■□□□ 1.28
SLC46A1-206ENST00000584995 DPEP1P16444 411 aa23.03■■□□□ 1.28
SLC46A1-206ENST00000584995 CANXP27824 592 aaKnown RBP23.03■■□□□ 1.28
SLC46A1-206ENST00000584995 TGFB2P61812 414 aa23.03■■□□□ 1.28
SLC46A1-206ENST00000584995 DDR1Q08345 913 aa23.03■■□□□ 1.28
SLC46A1-206ENST00000584995 ZBTB1Q9Y2K1 713 aa23.03■■□□□ 1.28
SLC46A1-206ENST00000584995 SOS1Q07889 1333 aaPredicted RBP23.03■■□□□ 1.28
SLC46A1-206ENST00000584995 TJP1Q07157 1748 aa23.02■■□□□ 1.28
SLC46A1-206ENST00000584995 ZNF496Q96IT1 587 aaPredicted RBP23.02■■□□□ 1.28
SLC46A1-206ENST00000584995 BCS1LQ9Y276 419 aa23.02■■□□□ 1.28
SLC46A1-206ENST00000584995 VSIG10Q8N0Z9 540 aa23.01■■□□□ 1.27
SLC46A1-206ENST00000584995 KCPQ6ZWJ8 1503 aa23.01■■□□□ 1.27
SLC46A1-206ENST00000584995 PXDNLA1KZ92 1463 aa23■■□□□ 1.27
SLC46A1-206ENST00000584995 ZNF790Q6PG37 636 aa23■■□□□ 1.27
SLC46A1-206ENST00000584995 KCNQ3O43525 872 aa22.99■■□□□ 1.27
SLC46A1-206ENST00000584995 TM4SF1P30408 202 aa22.99■■□□□ 1.27
SLC46A1-206ENST00000584995 C1QTNF8P60827 252 aa22.99■■□□□ 1.27
SLC46A1-206ENST00000584995 ZNF526Q8TF50 670 aaPredicted RBP22.99■■□□□ 1.27
SLC46A1-206ENST00000584995 C10orf71Q711Q0 1435 aa22.99■■□□□ 1.27
SLC46A1-206ENST00000584995 GIGYF1O75420 1035 aaPredicted RBP22.98■■□□□ 1.27
SLC46A1-206ENST00000584995 STARD3NLO95772 234 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms