RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 HMOX1P09601 288 aa23.19■■□□□ 1.3
ITGB4-213ENST00000584939 ITPK1Q13572 414 aa23.19■■□□□ 1.3
ITGB4-213ENST00000584939 KLHL34Q8N239 644 aa23.19■■□□□ 1.3
ITGB4-213ENST00000584939 MSL1Q68DK7 614 aa23.18■■□□□ 1.3
ITGB4-213ENST00000584939 AMIGO3Q86WK7 504 aa23.18■■□□□ 1.3
ITGB4-213ENST00000584939 C4BP0C0L5 1744 aa23.17■■□□□ 1.3
ITGB4-213ENST00000584939 SMIM5Q71RC9 77 aa23.17■■□□□ 1.3
ITGB4-213ENST00000584939 PHF14O94880 888 aa23.16■■□□□ 1.3
ITGB4-213ENST00000584939 YY1P25490 414 aa23.16■■□□□ 1.3
ITGB4-213ENST00000584939 RBM42Q9BTD8 480 aaKnown RBP23.16■■□□□ 1.3
ITGB4-213ENST00000584939 TAF1LQ8IZX4 1826 aa23.16■■□□□ 1.3
ITGB4-213ENST00000584939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.15■■□□□ 1.3
ITGB4-213ENST00000584939 COL24A1Q17RW2 1714 aa23.14■■□□□ 1.3
ITGB4-213ENST00000584939 AKAP4Q5JQC9 854 aa23.14■■□□□ 1.29
ITGB4-213ENST00000584939 NFATC2IPQ8NCF5 419 aa23.14■■□□□ 1.29
ITGB4-213ENST00000584939 SLC4A9Q96Q91 983 aa23.14■■□□□ 1.29
ITGB4-213ENST00000584939 GNPATO15228 680 aa23.13■■□□□ 1.29
ITGB4-213ENST00000584939 SSFA2P28290 1259 aa23.13■■□□□ 1.29
ITGB4-213ENST00000584939 U2SURPO15042 1029 aaKnown RBP23.1■■□□□ 1.29
ITGB4-213ENST00000584939 PTCD1O75127 700 aaKnown RBP23.1■■□□□ 1.29
ITGB4-213ENST00000584939 MTHFSDQ2M296 383 aaKnown RBP23.1■■□□□ 1.29
ITGB4-213ENST00000584939 LGR6Q9HBX8 967 aa23.1■■□□□ 1.29
ITGB4-213ENST00000584939 NLGN2Q8NFZ4 835 aa23.09■■□□□ 1.29
ITGB4-213ENST00000584939 GPR162Q16538 588 aa23.08■■□□□ 1.29
ITGB4-213ENST00000584939 COL3A1P02461 1466 aaPredicted RBP23.08■■□□□ 1.29
ITGB4-213ENST00000584939 RNMTO43148 476 aaKnown RBP23.07■■□□□ 1.28
ITGB4-213ENST00000584939 RC3H1Q5TC82 1133 aaKnown RBP23.07■■□□□ 1.28
ITGB4-213ENST00000584939 SLC52A2Q9HAB3 445 aa23.07■■□□□ 1.28
ITGB4-213ENST00000584939 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
ITGB4-213ENST00000584939 UBR3Q6ZT12 1888 aa23.07■■□□□ 1.28
ITGB4-213ENST00000584939 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
ITGB4-213ENST00000584939 TRAPPC3LQ5T215 181 aa23.05■■□□□ 1.28
ITGB4-213ENST00000584939 CNTNAP4Q9C0A0 1308 aa23.05■■□□□ 1.28
ITGB4-213ENST00000584939 PELP1Q8IZL8 1130 aaKnown RBP23.04■■□□□ 1.28
ITGB4-213ENST00000584939 PPP2R1AP30153 589 aa23.03■■□□□ 1.28
ITGB4-213ENST00000584939 CD2APQ9Y5K6 639 aa23.03■■□□□ 1.28
ITGB4-213ENST00000584939 RPS6KA4O75676 772 aa23.02■■□□□ 1.28
ITGB4-213ENST00000584939 ZNF831Q5JPB2 1677 aa23.02■■□□□ 1.28
ITGB4-213ENST00000584939 ADRA2BP18089 450 aa23.01■■□□□ 1.27
ITGB4-213ENST00000584939 ARHGEF1Q92888 912 aaKnown RBP23.01■■□□□ 1.27
ITGB4-213ENST00000584939 SCN11AQ9UI33 1791 aa23.01■■□□□ 1.27
ITGB4-213ENST00000584939 CRKLP46109 303 aaKnown RBP23■■□□□ 1.27
ITGB4-213ENST00000584939 SLC39A6Q13433 755 aa23■■□□□ 1.27
ITGB4-213ENST00000584939 GAS2L2Q8NHY3 880 aa23■■□□□ 1.27
ITGB4-213ENST00000584939 NUDCQ9Y266 331 aa23■■□□□ 1.27
ITGB4-213ENST00000584939 RFC4P35249 363 aa22.98■■□□□ 1.27
ITGB4-213ENST00000584939 MRC1P22897 1456 aa22.98■■□□□ 1.27
ITGB4-213ENST00000584939 GNAT3A8MTJ3 354 aa22.97■■□□□ 1.27
ITGB4-213ENST00000584939 MMP10P09238 476 aa22.97■■□□□ 1.27
ITGB4-213ENST00000584939 PRKAR2BP31323 418 aa22.97■■□□□ 1.27
ITGB4-213ENST00000584939 ZEB1P37275 1124 aaPredicted RBP22.97■■□□□ 1.27
ITGB4-213ENST00000584939 NLGN1Q8N2Q7 840 aa22.97■■□□□ 1.27
ITGB4-213ENST00000584939 YBX3P16989 372 aaKnown RBP eCLIP22.96■■□□□ 1.27
ITGB4-213ENST00000584939 DNAJC10Q8IXB1 793 aa22.96■■□□□ 1.27
ITGB4-213ENST00000584939 PHACTR3Q96KR7 559 aa22.96■■□□□ 1.27
ITGB4-213ENST00000584939 RSPH6AQ9H0K4 717 aa22.96■■□□□ 1.27
ITGB4-213ENST00000584939 COL5A3P25940 1745 aaPredicted RBP22.96■■□□□ 1.27
ITGB4-213ENST00000584939 U2AF1L5P0DN76 240 aaPredicted RBP22.95■■□□□ 1.26
ITGB4-213ENST00000584939 U2AF1Q01081 240 aaKnown RBP eCLIP22.95■■□□□ 1.26
ITGB4-213ENST00000584939 INTS5Q6P9B9 1019 aaKnown RBP22.95■■□□□ 1.26
ITGB4-213ENST00000584939 IL17REQ8NFR9 667 aa22.95■■□□□ 1.26
ITGB4-213ENST00000584939 GYS1P13807 737 aa22.94■■□□□ 1.26
ITGB4-213ENST00000584939 GRIN3BO60391 1043 aa22.93■■□□□ 1.26
ITGB4-213ENST00000584939 TEFQ10587 303 aa22.93■■□□□ 1.26
ITGB4-213ENST00000584939 CCDC87Q9NVE4 849 aa22.93■■□□□ 1.26
ITGB4-213ENST00000584939 ADAMTS7Q9UKP4 1686 aa22.93■■□□□ 1.26
ITGB4-213ENST00000584939 TJP1Q07157 1748 aa22.91■■□□□ 1.26
ITGB4-213ENST00000584939 FCHSD2O94868 740 aa22.91■■□□□ 1.26
ITGB4-213ENST00000584939 CYP19A1P11511 503 aaPredicted RBP22.91■■□□□ 1.26
ITGB4-213ENST00000584939 TTC5Q8N0Z6 440 aa22.91■■□□□ 1.26
ITGB4-213ENST00000584939 VSIG10Q8N0Z9 540 aa22.91■■□□□ 1.26
ITGB4-213ENST00000584939 ZNF784Q8NCA9 323 aaPredicted RBP22.91■■□□□ 1.26
ITGB4-213ENST00000584939 MYH14Q7Z406 1995 aaKnown RBP22.9■■□□□ 1.26
ITGB4-213ENST00000584939 SRP68Q9UHB9 627 aaKnown RBP22.9■■□□□ 1.26
ITGB4-213ENST00000584939 KCPQ6ZWJ8 1503 aa22.9■■□□□ 1.26
ITGB4-213ENST00000584939 CICQ96RK0 1608 aaPredicted RBP22.89■■□□□ 1.25
ITGB4-213ENST00000584939 USP42Q9H9J4 1324 aaKnown RBP22.88■■□□□ 1.25
ITGB4-213ENST00000584939 PARP3Q9Y6F1 533 aa22.88■■□□□ 1.25
ITGB4-213ENST00000584939 FKBP8Q14318 412 aa22.87■■□□□ 1.25
ITGB4-213ENST00000584939 ZNF790Q6PG37 636 aa22.87■■□□□ 1.25
ITGB4-213ENST00000584939 WWC3Q9ULE0 1092 aa22.87■■□□□ 1.25
ITGB4-213ENST00000584939 CEMIPQ8WUJ3 1361 aa22.87■■□□□ 1.25
ITGB4-213ENST00000584939 SOS1Q07889 1333 aaPredicted RBP22.86■■□□□ 1.25
ITGB4-213ENST00000584939 ZNF496Q96IT1 587 aaPredicted RBP22.86■■□□□ 1.25
ITGB4-213ENST00000584939 ZPR1O75312 459 aa22.85■■□□□ 1.25
ITGB4-213ENST00000584939 ZBTB1Q9Y2K1 713 aa22.85■■□□□ 1.25
ITGB4-213ENST00000584939 VIRMAQ69YN4 1812 aaKnown RBP22.85■■□□□ 1.25
ITGB4-213ENST00000584939 CHD4Q14839 1912 aa22.84■■□□□ 1.25
ITGB4-213ENST00000584939 STARD3NLO95772 234 aa22.84■■□□□ 1.25
ITGB4-213ENST00000584939 RTF1Q92541 710 aaKnown RBP22.84■■□□□ 1.25
ITGB4-213ENST00000584939 C4AP0C0L4 1744 aa22.83■■□□□ 1.25
ITGB4-213ENST00000584939 BTBD11A6QL63 1104 aa22.83■■□□□ 1.25
ITGB4-213ENST00000584939 CANXP27824 592 aaKnown RBP22.83■■□□□ 1.25
ITGB4-213ENST00000584939 TGFB2P61812 414 aa22.83■■□□□ 1.25
ITGB4-213ENST00000584939 USPL1Q5W0Q7 1092 aa22.83■■□□□ 1.25
ITGB4-213ENST00000584939 HEG1Q9ULI3 1381 aa22.82■■□□□ 1.24
ITGB4-213ENST00000584939 DDX10Q13206 875 aaKnown RBP22.82■■□□□ 1.24
ITGB4-213ENST00000584939 MCM10Q7L590 875 aa22.82■■□□□ 1.24
ITGB4-213ENST00000584939 TEX13AQ9BXU3 409 aaPredicted RBP22.82■■□□□ 1.24
ITGB4-213ENST00000584939 A0A0G2JLW4 131 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms