RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SPATA31A1Q5TZJ5 1347 aa17.95■□□□□ 0.46
UBBP4-202ENST00000584755 CANXP27824 592 aaKnown RBP17.95■□□□□ 0.46
UBBP4-202ENST00000584755 FRAT1Q92837 279 aaPredicted RBP17.95■□□□□ 0.46
UBBP4-202ENST00000584755 SLC52A2Q9HAB3 445 aa17.95■□□□□ 0.46
UBBP4-202ENST00000584755 THRAP3Q9Y2W1 955 aaKnown RBP17.95■□□□□ 0.46
UBBP4-202ENST00000584755 HEG1Q9ULI3 1381 aa17.94■□□□□ 0.46
UBBP4-202ENST00000584755 BTBD11A6QL63 1104 aa17.94■□□□□ 0.46
UBBP4-202ENST00000584755 EIF4A1P60842 406 aaKnown RBP17.94■□□□□ 0.46
UBBP4-202ENST00000584755 ARHGAP45Q92619 1136 aa17.94■□□□□ 0.46
UBBP4-202ENST00000584755 IPO8O15397 1037 aaKnown RBP17.93■□□□□ 0.46
UBBP4-202ENST00000584755 MS4A1P11836 297 aa17.93■□□□□ 0.46
UBBP4-202ENST00000584755 ATF7IPQ6VMQ6 1270 aa17.93■□□□□ 0.46
UBBP4-202ENST00000584755 FNBP4Q8N3X1 1017 aaPredicted RBP17.93■□□□□ 0.46
UBBP4-202ENST00000584755 CDCA7Q9BWT1 371 aaPredicted RBP17.93■□□□□ 0.46
UBBP4-202ENST00000584755 NOB1Q9ULX3 412 aaKnown RBP17.93■□□□□ 0.46
UBBP4-202ENST00000584755 BCL9LQ86UU0 1499 aa17.93■□□□□ 0.46
UBBP4-202ENST00000584755 SPATA31A5Q5VU36 1347 aa17.93■□□□□ 0.46
UBBP4-202ENST00000584755 SPATA31A7Q8IWB4 1347 aa17.93■□□□□ 0.46
UBBP4-202ENST00000584755 HOXB7P09629 217 aa17.92■□□□□ 0.46
UBBP4-202ENST00000584755 USP35Q9P2H5 1018 aa17.92■□□□□ 0.46
UBBP4-202ENST00000584755 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
UBBP4-202ENST00000584755 TRIM27P14373 513 aa17.91■□□□□ 0.46
UBBP4-202ENST00000584755 UNC5CLQ8IV45 518 aa17.91■□□□□ 0.46
UBBP4-202ENST00000584755 PANK1Q8TE04 598 aa17.91■□□□□ 0.46
UBBP4-202ENST00000584755 TNNQ9UQP3 1299 aa17.91■□□□□ 0.46
UBBP4-202ENST00000584755 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
UBBP4-202ENST00000584755 RLBP1P12271 317 aa17.9■□□□□ 0.46
UBBP4-202ENST00000584755 DZIP1LQ8IYY4 767 aaKnown RBP17.9■□□□□ 0.46
UBBP4-202ENST00000584755 TNS2Q63HR2 1409 aa17.9■□□□□ 0.46
UBBP4-202ENST00000584755 KCNQ3O43525 872 aa17.89■□□□□ 0.45
UBBP4-202ENST00000584755 BARGINQ6ZT62 677 aa17.89■□□□□ 0.45
UBBP4-202ENST00000584755 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
UBBP4-202ENST00000584755 TOGARAM1Q9Y4F4 1720 aa17.88■□□□□ 0.45
UBBP4-202ENST00000584755 CACNA1FO60840 1977 aa17.88■□□□□ 0.45
UBBP4-202ENST00000584755 AAMPQ13685 434 aa17.88■□□□□ 0.45
UBBP4-202ENST00000584755 VPS72Q15906 364 aa17.88■□□□□ 0.45
UBBP4-202ENST00000584755 ZNF790Q6PG37 636 aa17.88■□□□□ 0.45
UBBP4-202ENST00000584755 NGLY1Q96IV0 654 aa17.88■□□□□ 0.45
UBBP4-202ENST00000584755 C8orf37Q96NL8 207 aa17.88■□□□□ 0.45
UBBP4-202ENST00000584755 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
UBBP4-202ENST00000584755 PAPPAQ13219 1627 aa17.87■□□□□ 0.45
UBBP4-202ENST00000584755 CABP4P57796 275 aa17.87■□□□□ 0.45
UBBP4-202ENST00000584755 CCDC30Q5VVM6 783 aa17.87■□□□□ 0.45
UBBP4-202ENST00000584755 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
UBBP4-202ENST00000584755 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
UBBP4-202ENST00000584755 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
UBBP4-202ENST00000584755 TCERG1O14776 1098 aaKnown RBP17.86■□□□□ 0.45
UBBP4-202ENST00000584755 MVPQ14764 893 aaKnown RBP17.86■□□□□ 0.45
UBBP4-202ENST00000584755 FTSJ3Q8IY81 847 aaKnown RBP17.86■□□□□ 0.45
UBBP4-202ENST00000584755 CLUAP1Q96AJ1 413 aa17.86■□□□□ 0.45
UBBP4-202ENST00000584755 RGS12O14924 1447 aa17.85■□□□□ 0.45
UBBP4-202ENST00000584755 ABCC4O15439 1325 aa17.85■□□□□ 0.45
UBBP4-202ENST00000584755 PTPRCP08575 1304 aa17.85■□□□□ 0.45
UBBP4-202ENST00000584755 EXOC5O00471 708 aa17.85■□□□□ 0.45
UBBP4-202ENST00000584755 GIGYF1O75420 1035 aaPredicted RBP17.85■□□□□ 0.45
UBBP4-202ENST00000584755 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
UBBP4-202ENST00000584755 API5Q9BZZ5 524 aaKnown RBP17.85■□□□□ 0.45
UBBP4-202ENST00000584755 GLI3P10071 1580 aa17.84■□□□□ 0.45
UBBP4-202ENST00000584755 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
UBBP4-202ENST00000584755 UBR2Q8IWV8 1755 aa17.84■□□□□ 0.45
UBBP4-202ENST00000584755 STK31Q9BXU1 1019 aa17.83■□□□□ 0.45
UBBP4-202ENST00000584755 SLC39A6Q13433 755 aa17.82■□□□□ 0.44
UBBP4-202ENST00000584755 HDGFL1Q5TGJ6 251 aa17.82■□□□□ 0.44
UBBP4-202ENST00000584755 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
UBBP4-202ENST00000584755 USP21Q9UK80 565 aa17.82■□□□□ 0.44
UBBP4-202ENST00000584755 DDX19BQ9UMR2 479 aa17.82■□□□□ 0.44
UBBP4-202ENST00000584755 C5P01031 1676 aa17.81■□□□□ 0.44
UBBP4-202ENST00000584755 DDB1Q16531 1140 aa17.81■□□□□ 0.44
UBBP4-202ENST00000584755 KCPQ6ZWJ8 1503 aa17.8■□□□□ 0.44
UBBP4-202ENST00000584755 G2E3Q7L622 706 aa17.8■□□□□ 0.44
UBBP4-202ENST00000584755 TTC5Q8N0Z6 440 aa17.8■□□□□ 0.44
UBBP4-202ENST00000584755 ZNF496Q96IT1 587 aaPredicted RBP17.8■□□□□ 0.44
UBBP4-202ENST00000584755 CCDC9Q9Y3X0 531 aaKnown RBP17.8■□□□□ 0.44
UBBP4-202ENST00000584755 ITGB4P16144 1822 aa17.8■□□□□ 0.44
UBBP4-202ENST00000584755 THSD7AQ9UPZ6 1657 aa17.79■□□□□ 0.44
UBBP4-202ENST00000584755 FMNL2Q96PY5 1086 aa17.79■□□□□ 0.44
UBBP4-202ENST00000584755 ATRNO75882 1429 aa17.78■□□□□ 0.44
UBBP4-202ENST00000584755 FLIIQ13045 1269 aa17.78■□□□□ 0.44
UBBP4-202ENST00000584755 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
UBBP4-202ENST00000584755 INTS3Q68E01 1043 aaKnown RBP17.78■□□□□ 0.44
UBBP4-202ENST00000584755 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
UBBP4-202ENST00000584755 BCL9O00512 1426 aa17.77■□□□□ 0.44
UBBP4-202ENST00000584755 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
UBBP4-202ENST00000584755 EIF2S2P20042 333 aaKnown RBP17.77■□□□□ 0.44
UBBP4-202ENST00000584755 ITPRIPQ8IWB1 547 aa17.77■□□□□ 0.44
UBBP4-202ENST00000584755 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.44
UBBP4-202ENST00000584755 AFF2P51816 1311 aa17.77■□□□□ 0.43
UBBP4-202ENST00000584755 PRAMEF22A3QJZ6 481 aa17.76■□□□□ 0.43
UBBP4-202ENST00000584755 MARCH10Q8NA82 808 aaPredicted RBP17.76■□□□□ 0.43
UBBP4-202ENST00000584755 NECTIN2Q92692 538 aa17.76■□□□□ 0.43
UBBP4-202ENST00000584755 CHPF2Q9P2E5 772 aa17.76■□□□□ 0.43
UBBP4-202ENST00000584755 DBF4Q9UBU7 674 aaPredicted RBP17.76■□□□□ 0.43
UBBP4-202ENST00000584755 DOT1LQ8TEK3 1739 aa17.76■□□□□ 0.43
UBBP4-202ENST00000584755 KDM2BQ8NHM5 1336 aa17.76■□□□□ 0.43
UBBP4-202ENST00000584755 N4BP2Q86UW6 1770 aaPredicted RBP17.76■□□□□ 0.43
UBBP4-202ENST00000584755 FAM98CQ17RN3 349 aaKnown RBP17.75■□□□□ 0.43
UBBP4-202ENST00000584755 PIGBQ92521 554 aa17.75■□□□□ 0.43
UBBP4-202ENST00000584755 CHMP4BQ9H444 224 aaKnown RBP17.75■□□□□ 0.43
UBBP4-202ENST00000584755 ZBTB40Q9NUA8 1239 aa17.75■□□□□ 0.43
UBBP4-202ENST00000584755 PXDNLA1KZ92 1463 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms