RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC8-212ENST00000584604 CDCA8Q53HL2 280 aa11.21□□□□□ -0.61
TRAPPC8-212ENST00000584604 TPCN2Q8NHX9 752 aa11.21□□□□□ -0.61
TRAPPC8-212ENST00000584604 TRIM47Q96LD4 638 aa11.21□□□□□ -0.61
TRAPPC8-212ENST00000584604 NLRP3Q96P20 1036 aa11.21□□□□□ -0.61
TRAPPC8-212ENST00000584604 GMPR2Q9P2T1 348 aaKnown RBP11.21□□□□□ -0.61
TRAPPC8-212ENST00000584604 MEN1O00255 615 aa11.2□□□□□ -0.62
TRAPPC8-212ENST00000584604 BACH1O14867 736 aa11.2□□□□□ -0.62
TRAPPC8-212ENST00000584604 STAU1O95793 577 aaKnown RBP11.2□□□□□ -0.62
TRAPPC8-212ENST00000584604 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
TRAPPC8-212ENST00000584604 ZNF594Q96JF6 807 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC8-212ENST00000584604 ARXQ96QS3 562 aa11.2□□□□□ -0.62
TRAPPC8-212ENST00000584604 ZNF358Q9NW07 568 aa11.2□□□□□ -0.62
TRAPPC8-212ENST00000584604 TTLL8A6PVC2 850 aa11.19□□□□□ -0.62
TRAPPC8-212ENST00000584604 CENPCQ03188 943 aa11.19□□□□□ -0.62
TRAPPC8-212ENST00000584604 FOXD4L5Q5VV16 416 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC8-212ENST00000584604 FHDC1Q9C0D6 1143 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC8-212ENST00000584604 GRIP2Q9C0E4 1043 aa11.19□□□□□ -0.62
TRAPPC8-212ENST00000584604 SEC13P55735 322 aa11.18□□□□□ -0.62
TRAPPC8-212ENST00000584604 DPYDQ12882 1025 aa11.18□□□□□ -0.62
TRAPPC8-212ENST00000584604 MTFR1Q15390 333 aa11.18□□□□□ -0.62
TRAPPC8-212ENST00000584604 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRAPPC8-212ENST00000584604 RNF217Q8TC41 542 aa11.18□□□□□ -0.62
TRAPPC8-212ENST00000584604 POLMQ9NP87 494 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC8-212ENST00000584604 SMTNP53814 917 aa11.17□□□□□ -0.62
TRAPPC8-212ENST00000584604 RBM19Q9Y4C8 960 aaKnown RBP11.17□□□□□ -0.62
TRAPPC8-212ENST00000584604 NOVA2Q9UNW9 492 aaKnown RBP11.16□□□□□ -0.62
TRAPPC8-212ENST00000584604 ACIN1Q9UKV3 1341 aaKnown RBP11.15□□□□□ -0.62
TRAPPC8-212ENST00000584604 EPHA4P54764 986 aa11.15□□□□□ -0.62
TRAPPC8-212ENST00000584604 FAM200AQ8TCP9 573 aa11.15□□□□□ -0.62
TRAPPC8-212ENST00000584604 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.62
TRAPPC8-212ENST00000584604 A6NJY4 79 aa11.14□□□□□ -0.63
TRAPPC8-212ENST00000584604 SFI1A8K8P3 1242 aa11.14□□□□□ -0.63
TRAPPC8-212ENST00000584604 TLR1Q15399 786 aa11.14□□□□□ -0.63
TRAPPC8-212ENST00000584604 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
TRAPPC8-212ENST00000584604 DNMT3LQ9UJW3 386 aa11.14□□□□□ -0.63
TRAPPC8-212ENST00000584604 POTECB2RU33 542 aa11.13□□□□□ -0.63
TRAPPC8-212ENST00000584604 SPATA31C2B4DYI2 1134 aa11.13□□□□□ -0.63
TRAPPC8-212ENST00000584604 C11orf95C9JLR9 678 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC8-212ENST00000584604 CDK2AP1O14519 115 aa11.13□□□□□ -0.63
TRAPPC8-212ENST00000584604 SNRPBP14678 240 aaKnown RBP11.13□□□□□ -0.63
TRAPPC8-212ENST00000584604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.13□□□□□ -0.63
TRAPPC8-212ENST00000584604 PPARGC1BQ86YN6 1023 aaKnown RBP11.13□□□□□ -0.63
TRAPPC8-212ENST00000584604 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC8-212ENST00000584604 MAN1A2O60476 641 aa11.12□□□□□ -0.63
TRAPPC8-212ENST00000584604 FOXK2Q01167 660 aa11.12□□□□□ -0.63
TRAPPC8-212ENST00000584604 WDR44Q5JSH3 913 aa11.12□□□□□ -0.63
TRAPPC8-212ENST00000584604 SLC27A3Q5K4L6 730 aa11.12□□□□□ -0.63
TRAPPC8-212ENST00000584604 LYSMD3Q7Z3D4 306 aa11.12□□□□□ -0.63
TRAPPC8-212ENST00000584604 SCHIP1Q9P0W5 487 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC8-212ENST00000584604 IQSEC3Q9UPP2 1182 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC8-212ENST00000584604 FIGNL2A6NMB9 653 aa11.11□□□□□ -0.63
TRAPPC8-212ENST00000584604 FAM69CQ0P6D2 419 aa11.1□□□□□ -0.63
TRAPPC8-212ENST00000584604 SWI5Q1ZZU3 235 aa11.1□□□□□ -0.63
TRAPPC8-212ENST00000584604 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
TRAPPC8-212ENST00000584604 STK32AQ8WU08 396 aa11.1□□□□□ -0.63
TRAPPC8-212ENST00000584604 TNS4Q8IZW8 715 aa11.09□□□□□ -0.63
TRAPPC8-212ENST00000584604 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
TRAPPC8-212ENST00000584604 TSEN2Q8NCE0 465 aaKnown RBP11.09□□□□□ -0.63
TRAPPC8-212ENST00000584604 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC8-212ENST00000584604 TMEM164Q5U3C3 297 aa11.08□□□□□ -0.64
TRAPPC8-212ENST00000584604 TMEM214Q6NUQ4 689 aaKnown RBP11.08□□□□□ -0.64
TRAPPC8-212ENST00000584604 PRICKLE2Q7Z3G6 844 aa11.08□□□□□ -0.64
TRAPPC8-212ENST00000584604 RHBDD1Q8TEB9 315 aa11.08□□□□□ -0.64
TRAPPC8-212ENST00000584604 GNASQ5JWF2 1037 aa11.07□□□□□ -0.64
TRAPPC8-212ENST00000584604 ZNF787Q6DD87 383 aa11.07□□□□□ -0.64
TRAPPC8-212ENST00000584604 NBPF10Q6P3W6 841 aaKnown RBP11.07□□□□□ -0.64
TRAPPC8-212ENST00000584604 TAS1R3Q7RTX0 852 aa11.07□□□□□ -0.64
TRAPPC8-212ENST00000584604 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
TRAPPC8-212ENST00000584604 SOBPA7XYQ1 873 aa11.06□□□□□ -0.64
TRAPPC8-212ENST00000584604 POU4F2Q12837 409 aa11.06□□□□□ -0.64
TRAPPC8-212ENST00000584604 TMEM88BA6NKF7 163 aa11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 CSB-PGBD3P0DP91 1061 aa11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 C4orf17Q53FE4 359 aa11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 POTEAQ6S8J7 498 aa11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 SLC9A9Q8IVB4 645 aa11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 CLP1Q92989 425 aaKnown RBP11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 HINFPQ9BQA5 517 aa11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 NIFKQ9BYG3 293 aaKnown RBP11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 USTQ9Y2C2 406 aa11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 USP3Q9Y6I4 520 aa11.05□□□□□ -0.64
TRAPPC8-212ENST00000584604 STAG2Q8N3U4 1231 aa11.04□□□□□ -0.64
TRAPPC8-212ENST00000584604 TSPAN10Q9H1Z9 355 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC8-212ENST00000584604 C21orf2O43822 256 aa11.03□□□□□ -0.64
TRAPPC8-212ENST00000584604 IGFBP4P22692 258 aa11.03□□□□□ -0.64
TRAPPC8-212ENST00000584604 WEE1P30291 646 aa11.03□□□□□ -0.64
TRAPPC8-212ENST00000584604 PTSQ03393 145 aa11.03□□□□□ -0.64
TRAPPC8-212ENST00000584604 TEAD4Q15561 434 aa11.03□□□□□ -0.64
TRAPPC8-212ENST00000584604 ATAD2Q6PL18 1390 aa11.03□□□□□ -0.64
TRAPPC8-212ENST00000584604 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.65
TRAPPC8-212ENST00000584604 SLC35F4A4IF30 521 aa11.02□□□□□ -0.65
TRAPPC8-212ENST00000584604 RHOQP17081 205 aa11.01□□□□□ -0.65
TRAPPC8-212ENST00000584604 PSMA6P60900 246 aaKnown RBP11.01□□□□□ -0.65
TRAPPC8-212ENST00000584604 DYRK1BQ9Y463 629 aa11.01□□□□□ -0.65
TRAPPC8-212ENST00000584604 HIRAP54198 1017 aaPredicted RBP11□□□□□ -0.65
TRAPPC8-212ENST00000584604 PDE4CQ08493 712 aa11□□□□□ -0.65
TRAPPC8-212ENST00000584604 RETREG2Q8NC44 543 aa11□□□□□ -0.65
TRAPPC8-212ENST00000584604 ZDHHC1Q8WTX9 485 aa11□□□□□ -0.65
TRAPPC8-212ENST00000584604 CABP1Q9NZU7 370 aa11□□□□□ -0.65
TRAPPC8-212ENST00000584604 NOS2P35228 1153 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms