RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 AKAP4Q5JQC9 854 aa12.1□□□□□ -0.47
SNX11-213ENST00000584335 C20orf194Q5TEA3 1177 aa12.1□□□□□ -0.47
SNX11-213ENST00000584335 CRBNQ96SW2 442 aa12.1□□□□□ -0.47
SNX11-213ENST00000584335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNX11-213ENST00000584335 LAS1LQ9Y4W2 734 aaKnown RBP12.1□□□□□ -0.47
SNX11-213ENST00000584335 PKD1L3Q7Z443 1732 aa12.1□□□□□ -0.47
SNX11-213ENST00000584335 COL16A1Q07092 1604 aaPredicted RBP12.1□□□□□ -0.47
SNX11-213ENST00000584335 KIF16BQ96L93 1317 aa12.1□□□□□ -0.47
SNX11-213ENST00000584335 COL5A2P05997 1499 aaPredicted RBP12.09□□□□□ -0.47
SNX11-213ENST00000584335 PHLPP1O60346 1717 aa12.09□□□□□ -0.47
SNX11-213ENST00000584335 VAMP4O75379 141 aa12.09□□□□□ -0.47
SNX11-213ENST00000584335 MS4A1P11836 297 aa12.09□□□□□ -0.47
SNX11-213ENST00000584335 AAMPQ13685 434 aa12.09□□□□□ -0.47
SNX11-213ENST00000584335 SSH1Q8WYL5 1049 aa12.09□□□□□ -0.47
SNX11-213ENST00000584335 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
SNX11-213ENST00000584335 PARP4Q9UKK3 1724 aaKnown RBP12.08□□□□□ -0.47
SNX11-213ENST00000584335 COL14A1Q05707 1796 aaKnown RBP12.08□□□□□ -0.48
SNX11-213ENST00000584335 SOCS7O14512 581 aa12.08□□□□□ -0.48
SNX11-213ENST00000584335 CHRNA2Q15822 529 aa12.08□□□□□ -0.48
SNX11-213ENST00000584335 IL17REQ8NFR9 667 aa12.08□□□□□ -0.48
SNX11-213ENST00000584335 CCDC136Q96JN2 1154 aa12.08□□□□□ -0.48
SNX11-213ENST00000584335 PRDM11Q9NQV5 511 aa12.08□□□□□ -0.48
SNX11-213ENST00000584335 SMC4Q9NTJ3 1288 aa12.08□□□□□ -0.48
SNX11-213ENST00000584335 WDR17Q8IZU2 1322 aa12.08□□□□□ -0.48
SNX11-213ENST00000584335 TOM1O60784 492 aa12.07□□□□□ -0.48
SNX11-213ENST00000584335 CANXP27824 592 aaKnown RBP12.07□□□□□ -0.48
SNX11-213ENST00000584335 TWISTNBQ3B726 338 aaPredicted RBP12.07□□□□□ -0.48
SNX11-213ENST00000584335 ZKSCAN2Q63HK3 967 aa12.07□□□□□ -0.48
SNX11-213ENST00000584335 ZNF530Q6P9A1 599 aaPredicted RBP12.07□□□□□ -0.48
SNX11-213ENST00000584335 RAPGEF4Q8WZA2 1011 aa12.07□□□□□ -0.48
SNX11-213ENST00000584335 NLRP2Q9NX02 1062 aa12.07□□□□□ -0.48
SNX11-213ENST00000584335 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
SNX11-213ENST00000584335 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
SNX11-213ENST00000584335 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
SNX11-213ENST00000584335 CHRM1P11229 460 aaPredicted RBP12.06□□□□□ -0.48
SNX11-213ENST00000584335 TATP17735 454 aaPredicted RBP12.06□□□□□ -0.48
SNX11-213ENST00000584335 TAF7Q15545 349 aaPredicted RBP12.06□□□□□ -0.48
SNX11-213ENST00000584335 B4GALNT3Q6L9W6 998 aa12.06□□□□□ -0.48
SNX11-213ENST00000584335 IFNL1Q8IU54 200 aa12.06□□□□□ -0.48
SNX11-213ENST00000584335 TSPYL6Q8N831 410 aa12.06□□□□□ -0.48
SNX11-213ENST00000584335 C8orf58Q8NAV2 365 aa12.06□□□□□ -0.48
SNX11-213ENST00000584335 ARHGAP45Q92619 1136 aa12.06□□□□□ -0.48
SNX11-213ENST00000584335 MEGF6O75095 1541 aa12.06□□□□□ -0.48
SNX11-213ENST00000584335 IPO8O15397 1037 aaKnown RBP12.05□□□□□ -0.48
SNX11-213ENST00000584335 CSB-PGBD3P0DP91 1061 aa12.05□□□□□ -0.48
SNX11-213ENST00000584335 C1orf141Q5JVX7 400 aa12.05□□□□□ -0.48
SNX11-213ENST00000584335 FRAT1Q92837 279 aaPredicted RBP12.05□□□□□ -0.48
SNX11-213ENST00000584335 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
SNX11-213ENST00000584335 SGIP1Q9BQI5 828 aa12.05□□□□□ -0.48
SNX11-213ENST00000584335 BCL2L13Q9BXK5 485 aa12.05□□□□□ -0.48
SNX11-213ENST00000584335 TSPYL4Q9UJ04 414 aa12.05□□□□□ -0.48
SNX11-213ENST00000584335 PCDHB8Q9UN66 801 aa12.05□□□□□ -0.48
SNX11-213ENST00000584335 SPG7Q9UQ90 795 aa12.05□□□□□ -0.48
SNX11-213ENST00000584335 ATF7IPQ6VMQ6 1270 aa12.04□□□□□ -0.48
SNX11-213ENST00000584335 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
SNX11-213ENST00000584335 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
SNX11-213ENST00000584335 RNMTO43148 476 aaKnown RBP12.03□□□□□ -0.48
SNX11-213ENST00000584335 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
SNX11-213ENST00000584335 CARD10Q9BWT7 1032 aa12.03□□□□□ -0.48
SNX11-213ENST00000584335 MRC1P22897 1456 aa12.02□□□□□ -0.48
SNX11-213ENST00000584335 TRIM27P14373 513 aa12.02□□□□□ -0.49
SNX11-213ENST00000584335 PANK1Q8TE04 598 aa12.02□□□□□ -0.49
SNX11-213ENST00000584335 LGR6Q9HBX8 967 aa12.02□□□□□ -0.49
SNX11-213ENST00000584335 NOB1Q9ULX3 412 aaKnown RBP12.02□□□□□ -0.49
SNX11-213ENST00000584335 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
SNX11-213ENST00000584335 PLCH1Q4KWH8 1693 aa12.02□□□□□ -0.49
SNX11-213ENST00000584335 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
SNX11-213ENST00000584335 RLBP1P12271 317 aa12.01□□□□□ -0.49
SNX11-213ENST00000584335 PHKG2P15735 406 aa12.01□□□□□ -0.49
SNX11-213ENST00000584335 MVPQ14764 893 aaKnown RBP12.01□□□□□ -0.49
SNX11-213ENST00000584335 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
SNX11-213ENST00000584335 ELL2O00472 640 aaPredicted RBP12□□□□□ -0.49
SNX11-213ENST00000584335 HSP90AB1P08238 724 aaKnown RBP12□□□□□ -0.49
SNX11-213ENST00000584335 HOXB7P09629 217 aa12□□□□□ -0.49
SNX11-213ENST00000584335 TEFQ10587 303 aa12□□□□□ -0.49
SNX11-213ENST00000584335 TOM1L2Q6ZVM7 507 aa12□□□□□ -0.49
SNX11-213ENST00000584335 FTSJ3Q8IY81 847 aaKnown RBP12□□□□□ -0.49
SNX11-213ENST00000584335 IFNL2Q8IZJ0 200 aa12□□□□□ -0.49
SNX11-213ENST00000584335 CLUAP1Q96AJ1 413 aa12□□□□□ -0.49
SNX11-213ENST00000584335 MIS18AQ9NYP9 233 aa12□□□□□ -0.49
SNX11-213ENST00000584335 TNNQ9UQP3 1299 aa12□□□□□ -0.49
SNX11-213ENST00000584335 COG6Q9Y2V7 657 aa12□□□□□ -0.49
SNX11-213ENST00000584335 KDM6AO15550 1401 aaPredicted RBP12□□□□□ -0.49
SNX11-213ENST00000584335 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
SNX11-213ENST00000584335 KRT24Q2M2I5 525 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 MPRIPQ6WCQ1 1025 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 ZNF467Q7Z7K2 595 aaPredicted RBP11.99□□□□□ -0.49
SNX11-213ENST00000584335 DCAF5Q96JK2 942 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 API5Q9BZZ5 524 aaKnown RBP11.99□□□□□ -0.49
SNX11-213ENST00000584335 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 ABCC4O15439 1325 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 PTPRCP08575 1304 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 NRAPQ86VF7 1730 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 NWD2Q9ULI1 1742 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 CACNA1FO60840 1977 aa11.99□□□□□ -0.49
SNX11-213ENST00000584335 WNK3Q9BYP7 1800 aa11.98□□□□□ -0.49
SNX11-213ENST00000584335 HEG1Q9ULI3 1381 aa11.98□□□□□ -0.49
SNX11-213ENST00000584335 PCDH11XQ9BZA7 1347 aa11.98□□□□□ -0.49
SNX11-213ENST00000584335 PCDH11YQ9BZA8 1340 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms