RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 USP17L1Q7RTZ2 530 aa9.48□□□□□ -0.89
NF1-223ENST00000584328 PLEKHM2Q8IWE5 1019 aa9.48□□□□□ -0.89
NF1-223ENST00000584328 NBPF15Q8N660 670 aa9.48□□□□□ -0.89
NF1-223ENST00000584328 ZSCAN10Q96SZ4 725 aaPredicted RBP9.48□□□□□ -0.89
NF1-223ENST00000584328 FHDC1Q9C0D6 1143 aaPredicted RBP9.48□□□□□ -0.89
NF1-223ENST00000584328 GTF2E1P29083 439 aaPredicted RBP9.47□□□□□ -0.89
NF1-223ENST00000584328 TLR1Q15399 786 aa9.47□□□□□ -0.89
NF1-223ENST00000584328 TAS1R3Q7RTX0 852 aa9.47□□□□□ -0.89
NF1-223ENST00000584328 ZNF777Q9ULD5 760 aaPredicted RBP9.47□□□□□ -0.89
NF1-223ENST00000584328 WASLO00401 505 aaPredicted RBP9.46□□□□□ -0.9
NF1-223ENST00000584328 PSME1Q06323 249 aa9.46□□□□□ -0.9
NF1-223ENST00000584328 TMEM214Q6NUQ4 689 aaKnown RBP9.46□□□□□ -0.9
NF1-223ENST00000584328 TFIP11Q9UBB9 837 aaKnown RBP9.46□□□□□ -0.9
NF1-223ENST00000584328 CDC14CA4D256 554 aa9.45□□□□□ -0.9
NF1-223ENST00000584328 TMEM229AB2RXF0 380 aa9.45□□□□□ -0.9
NF1-223ENST00000584328 WDR44Q5JSH3 913 aa9.45□□□□□ -0.9
NF1-223ENST00000584328 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
NF1-223ENST00000584328 NANOS1Q8WY41 292 aaKnown RBP9.45□□□□□ -0.9
NF1-223ENST00000584328 TIMMDC1Q9NPL8 285 aa9.45□□□□□ -0.9
NF1-223ENST00000584328 SERTAD1Q9UHV2 236 aa9.45□□□□□ -0.9
NF1-223ENST00000584328 EIF4G1Q04637 1599 aaKnown RBP9.45□□□□□ -0.9
NF1-223ENST00000584328 TRIM50Q86XT4 487 aa9.44□□□□□ -0.9
NF1-223ENST00000584328 VWA5B2Q8N398 1253 aa9.44□□□□□ -0.9
NF1-223ENST00000584328 DYRK1BQ9Y463 629 aa9.44□□□□□ -0.9
NF1-223ENST00000584328 PALM3A6NDB9 673 aaPredicted RBP9.43□□□□□ -0.9
NF1-223ENST00000584328 PHKA2P46019 1235 aa9.43□□□□□ -0.9
NF1-223ENST00000584328 SV2AQ7L0J3 742 aa9.43□□□□□ -0.9
NF1-223ENST00000584328 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
NF1-223ENST00000584328 GAS2L1Q99501 681 aaPredicted RBP9.43□□□□□ -0.9
NF1-223ENST00000584328 MKRN1Q9UHC7 482 aaKnown RBP9.43□□□□□ -0.9
NF1-223ENST00000584328 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
NF1-223ENST00000584328 SMTNP53814 917 aa9.42□□□□□ -0.9
NF1-223ENST00000584328 C4orf17Q53FE4 359 aa9.42□□□□□ -0.9
NF1-223ENST00000584328 RIPOR1Q6ZS17 1223 aa9.42□□□□□ -0.9
NF1-223ENST00000584328 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
NF1-223ENST00000584328 RHBDD1Q8TEB9 315 aa9.42□□□□□ -0.9
NF1-223ENST00000584328 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
NF1-223ENST00000584328 ZMYND15Q9H091 742 aa9.42□□□□□ -0.9
NF1-223ENST00000584328 CUEDC1Q9NWM3 386 aaPredicted RBP9.42□□□□□ -0.9
NF1-223ENST00000584328 MAFBQ9Y5Q3 323 aaPredicted RBP9.42□□□□□ -0.9
NF1-223ENST00000584328 CLDN10P78369 228 aa9.41□□□□□ -0.9
NF1-223ENST00000584328 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
NF1-223ENST00000584328 SLC4A9Q96Q91 983 aa9.41□□□□□ -0.9
NF1-223ENST00000584328 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.9
NF1-223ENST00000584328 BACH1O14867 736 aa9.4□□□□□ -0.9
NF1-223ENST00000584328 INSM1Q01101 510 aaPredicted RBP9.4□□□□□ -0.9
NF1-223ENST00000584328 OGFOD1Q8N543 542 aa9.4□□□□□ -0.9
NF1-223ENST00000584328 DNAAF2Q9NVR5 837 aaKnown RBP9.4□□□□□ -0.9
NF1-223ENST00000584328 ZNF358Q9NW07 568 aa9.4□□□□□ -0.9
NF1-223ENST00000584328 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
NF1-223ENST00000584328 A6NJY4 79 aa9.39□□□□□ -0.91
NF1-223ENST00000584328 ZBTB7BO15156 539 aaPredicted RBP9.39□□□□□ -0.91
NF1-223ENST00000584328 F11P03951 625 aa9.39□□□□□ -0.91
NF1-223ENST00000584328 CCDC102BQ68D86 513 aa9.39□□□□□ -0.91
NF1-223ENST00000584328 TRIM22Q8IYM9 498 aa9.39□□□□□ -0.91
NF1-223ENST00000584328 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
NF1-223ENST00000584328 A0A1B0GTH6 734 aa9.38□□□□□ -0.91
NF1-223ENST00000584328 MTFR1Q15390 333 aa9.38□□□□□ -0.91
NF1-223ENST00000584328 DBN1Q16643 649 aa9.38□□□□□ -0.91
NF1-223ENST00000584328 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
NF1-223ENST00000584328 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
NF1-223ENST00000584328 GPAMQ9HCL2 828 aa9.38□□□□□ -0.91
NF1-223ENST00000584328 H7C1W4 665 aa9.37□□□□□ -0.91
NF1-223ENST00000584328 CDK2AP1O14519 115 aa9.37□□□□□ -0.91
NF1-223ENST00000584328 LMOD1P29536 600 aaPredicted RBP9.37□□□□□ -0.91
NF1-223ENST00000584328 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
NF1-223ENST00000584328 LARGE2Q8N3Y3 721 aa9.37□□□□□ -0.91
NF1-223ENST00000584328 GMCL1Q96IK5 515 aa9.37□□□□□ -0.91
NF1-223ENST00000584328 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
NF1-223ENST00000584328 NIFKQ9BYG3 293 aaKnown RBP9.37□□□□□ -0.91
NF1-223ENST00000584328 RASA1P20936 1047 aa9.36□□□□□ -0.91
NF1-223ENST00000584328 KRT76Q01546 638 aa9.36□□□□□ -0.91
NF1-223ENST00000584328 CNTNAP3BQ96NU0 1288 aa9.36□□□□□ -0.91
NF1-223ENST00000584328 CNTNAP3Q9BZ76 1288 aa9.36□□□□□ -0.91
NF1-223ENST00000584328 IQSEC3Q9UPP2 1182 aaPredicted RBP9.36□□□□□ -0.91
NF1-223ENST00000584328 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
NF1-223ENST00000584328 BAZ1AQ9NRL2 1556 aaPredicted RBP9.36□□□□□ -0.91
NF1-223ENST00000584328 CC2D2AQ9P2K1 1620 aa9.35□□□□□ -0.91
NF1-223ENST00000584328 MSX1P28360 303 aa9.35□□□□□ -0.91
NF1-223ENST00000584328 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
NF1-223ENST00000584328 SMARCA4P51532 1647 aa9.34□□□□□ -0.91
NF1-223ENST00000584328 RNFT1Q5M7Z0 435 aa9.34□□□□□ -0.91
NF1-223ENST00000584328 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
NF1-223ENST00000584328 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
NF1-223ENST00000584328 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
NF1-223ENST00000584328 SIX5Q8N196 739 aa9.34□□□□□ -0.91
NF1-223ENST00000584328 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
NF1-223ENST00000584328 CABP1Q9NZU7 370 aa9.34□□□□□ -0.91
NF1-223ENST00000584328 SCHIP1Q9P0W5 487 aaPredicted RBP9.34□□□□□ -0.91
NF1-223ENST00000584328 RBM19Q9Y4C8 960 aaKnown RBP9.34□□□□□ -0.91
NF1-223ENST00000584328 GPR25O00155 361 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 CSB-PGBD3P0DP91 1061 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 EPHA4P54764 986 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 CFAP70Q5T0N1 1121 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
NF1-223ENST00000584328 ZNF295-AS1Q8N0V1 137 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 PGBD3Q8N328 593 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 ZSCAN1Q8NBB4 408 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 AIDAQ96BJ3 306 aa9.33□□□□□ -0.92
NF1-223ENST00000584328 RUBCNLQ9H714 662 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms