RNA–Protein interactions for RNA: ENST00000584287.5

ARHGAP28-214, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-214ENST00000584287 TLR1Q15399 786 aa7.44□□□□□ -1.22
ARHGAP28-214ENST00000584287 WDR44Q5JSH3 913 aa7.44□□□□□ -1.22
ARHGAP28-214ENST00000584287 USP17L2Q6R6M4 530 aa7.44□□□□□ -1.22
ARHGAP28-214ENST00000584287 USP17L1Q7RTZ2 530 aa7.44□□□□□ -1.22
ARHGAP28-214ENST00000584287 SERTAD1Q9UHV2 236 aa7.44□□□□□ -1.22
ARHGAP28-214ENST00000584287 INSM1Q01101 510 aaPredicted RBP7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 DBN1Q16643 649 aa7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 C4orf17Q53FE4 359 aa7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 RNFT1Q5M7Z0 435 aa7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 TMEM214Q6NUQ4 689 aaKnown RBP7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 SV2AQ7L0J3 742 aa7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 PPARGC1BQ86YN6 1023 aaKnown RBP7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 PLEKHM2Q8IWE5 1019 aa7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 GAS2L1Q99501 681 aaPredicted RBP7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 TIMMDC1Q9NPL8 285 aa7.43□□□□□ -1.22
ARHGAP28-214ENST00000584287 RIPOR1Q6ZS17 1223 aa7.42□□□□□ -1.22
ARHGAP28-214ENST00000584287 ZNF837Q96EG3 531 aaPredicted RBP7.42□□□□□ -1.22
ARHGAP28-214ENST00000584287 CALR3Q96L12 384 aaKnown RBP7.42□□□□□ -1.22
ARHGAP28-214ENST00000584287 COL25A1Q9BXS0 654 aaPredicted RBP7.42□□□□□ -1.22
ARHGAP28-214ENST00000584287 TFIP11Q9UBB9 837 aaKnown RBP7.42□□□□□ -1.22
ARHGAP28-214ENST00000584287 KIAA1024Q9UPX6 916 aa7.42□□□□□ -1.22
ARHGAP28-214ENST00000584287 USP3Q9Y6I4 520 aa7.42□□□□□ -1.22
ARHGAP28-214ENST00000584287 ZBTB7BO15156 539 aaPredicted RBP7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 SMTNP53814 917 aa7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 CLDN10P78369 228 aa7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 GNASQ5JWF2 1037 aa7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 TRIM22Q8IYM9 498 aa7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 RHBDD1Q8TEB9 315 aa7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 CNTNAP3BQ96NU0 1288 aa7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 SLC4A9Q96Q91 983 aa7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 CNTNAP3Q9BZ76 1288 aa7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 ZNF777Q9ULD5 760 aaPredicted RBP7.41□□□□□ -1.22
ARHGAP28-214ENST00000584287 PALM3A6NDB9 673 aaPredicted RBP7.4□□□□□ -1.22
ARHGAP28-214ENST00000584287 THBS1P07996 1170 aa7.4□□□□□ -1.22
ARHGAP28-214ENST00000584287 PSME1Q06323 249 aa7.4□□□□□ -1.22
ARHGAP28-214ENST00000584287 ZNF295-AS1Q8N0V1 137 aa7.4□□□□□ -1.22
ARHGAP28-214ENST00000584287 GPAMQ9HCL2 828 aa7.4□□□□□ -1.22
ARHGAP28-214ENST00000584287 MKRN1Q9UHC7 482 aaKnown RBP7.4□□□□□ -1.22
ARHGAP28-214ENST00000584287 IQSEC3Q9UPP2 1182 aaPredicted RBP7.4□□□□□ -1.22
ARHGAP28-214ENST00000584287 MAFBQ9Y5Q3 323 aaPredicted RBP7.4□□□□□ -1.22
ARHGAP28-214ENST00000584287 GPR25O00155 361 aa7.39□□□□□ -1.23
ARHGAP28-214ENST00000584287 F11P03951 625 aa7.39□□□□□ -1.23
ARHGAP28-214ENST00000584287 GTF2E1P29083 439 aaPredicted RBP7.39□□□□□ -1.23
ARHGAP28-214ENST00000584287 GAS6Q14393 721 aa7.39□□□□□ -1.23
ARHGAP28-214ENST00000584287 MTFR1Q15390 333 aa7.39□□□□□ -1.23
ARHGAP28-214ENST00000584287 ZSCAN1Q8NBB4 408 aa7.39□□□□□ -1.23
ARHGAP28-214ENST00000584287 PPP1R12CQ9BZL4 782 aa7.39□□□□□ -1.23
ARHGAP28-214ENST00000584287 ZNF358Q9NW07 568 aa7.39□□□□□ -1.23
ARHGAP28-214ENST00000584287 A0A1B0GTH6 734 aa7.38□□□□□ -1.23
ARHGAP28-214ENST00000584287 A6NJY4 79 aa7.38□□□□□ -1.23
ARHGAP28-214ENST00000584287 PLA2G4AP47712 749 aa7.38□□□□□ -1.23
ARHGAP28-214ENST00000584287 CCDC102BQ68D86 513 aa7.38□□□□□ -1.23
ARHGAP28-214ENST00000584287 TRIM50Q86XT4 487 aa7.38□□□□□ -1.23
ARHGAP28-214ENST00000584287 OGFOD1Q8N543 542 aa7.38□□□□□ -1.23
ARHGAP28-214ENST00000584287 TPCN2Q8NHX9 752 aa7.38□□□□□ -1.23
ARHGAP28-214ENST00000584287 GTPBP3Q969Y2 492 aaKnown RBP7.38□□□□□ -1.23
ARHGAP28-214ENST00000584287 CDK2AP1O14519 115 aa7.37□□□□□ -1.23
ARHGAP28-214ENST00000584287 MSX1P28360 303 aa7.37□□□□□ -1.23
ARHGAP28-214ENST00000584287 EPHA4P54764 986 aa7.37□□□□□ -1.23
ARHGAP28-214ENST00000584287 GMCL1Q96IK5 515 aa7.37□□□□□ -1.23
ARHGAP28-214ENST00000584287 DNAAF2Q9NVR5 837 aaKnown RBP7.37□□□□□ -1.23
ARHGAP28-214ENST00000584287 STK17AQ9UEE5 414 aa7.37□□□□□ -1.23
ARHGAP28-214ENST00000584287 GTF3C3Q9Y5Q9 886 aa7.37□□□□□ -1.23
ARHGAP28-214ENST00000584287 H7C1W4 665 aa7.36□□□□□ -1.23
ARHGAP28-214ENST00000584287 DKK1O94907 266 aa7.36□□□□□ -1.23
ARHGAP28-214ENST00000584287 TNS4Q8IZW8 715 aa7.36□□□□□ -1.23
ARHGAP28-214ENST00000584287 ZNF594Q96JF6 807 aaPredicted RBP7.36□□□□□ -1.23
ARHGAP28-214ENST00000584287 NIFKQ9BYG3 293 aaKnown RBP7.36□□□□□ -1.23
ARHGAP28-214ENST00000584287 NUCKS1Q9H1E3 243 aaKnown RBP7.36□□□□□ -1.23
ARHGAP28-214ENST00000584287 RUBCNLQ9H714 662 aa7.36□□□□□ -1.23
ARHGAP28-214ENST00000584287 BACH1O14867 736 aa7.35□□□□□ -1.23
ARHGAP28-214ENST00000584287 LMOD1P29536 600 aaPredicted RBP7.35□□□□□ -1.23
ARHGAP28-214ENST00000584287 ATP1A2P50993 1020 aa7.35□□□□□ -1.23
ARHGAP28-214ENST00000584287 FOXK2Q01167 660 aa7.35□□□□□ -1.23
ARHGAP28-214ENST00000584287 KANK4Q5T7N3 995 aaPredicted RBP7.35□□□□□ -1.23
ARHGAP28-214ENST00000584287 SCHIP1Q9P0W5 487 aaPredicted RBP7.35□□□□□ -1.23
ARHGAP28-214ENST00000584287 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
ARHGAP28-214ENST00000584287 ATP4AP20648 1035 aa7.34□□□□□ -1.23
ARHGAP28-214ENST00000584287 UBAP2LQ14157 1087 aaKnown RBP7.34□□□□□ -1.23
ARHGAP28-214ENST00000584287 TBCELQ5QJ74 424 aa7.34□□□□□ -1.23
ARHGAP28-214ENST00000584287 SIX5Q8N196 739 aa7.34□□□□□ -1.23
ARHGAP28-214ENST00000584287 LARGE2Q8N3Y3 721 aa7.34□□□□□ -1.23
ARHGAP28-214ENST00000584287 ZDHHC1Q8WTX9 485 aa7.34□□□□□ -1.23
ARHGAP28-214ENST00000584287 ZMYND15Q9H091 742 aa7.34□□□□□ -1.23
ARHGAP28-214ENST00000584287 CABP1Q9NZU7 370 aa7.34□□□□□ -1.23
ARHGAP28-214ENST00000584287 SFI1A8K8P3 1242 aa7.33□□□□□ -1.24
ARHGAP28-214ENST00000584287 SLURP2P0DP57 97 aa7.33□□□□□ -1.24
ARHGAP28-214ENST00000584287 RASA1P20936 1047 aa7.33□□□□□ -1.24
ARHGAP28-214ENST00000584287 CRTC2Q53ET0 693 aaPredicted RBP7.33□□□□□ -1.24
ARHGAP28-214ENST00000584287 CFAP70Q5T0N1 1121 aa7.33□□□□□ -1.24
ARHGAP28-214ENST00000584287 SLC9A9Q8IVB4 645 aa7.33□□□□□ -1.24
ARHGAP28-214ENST00000584287 WHAMMQ8TF30 809 aa7.33□□□□□ -1.24
ARHGAP28-214ENST00000584287 AIDAQ96BJ3 306 aa7.33□□□□□ -1.24
ARHGAP28-214ENST00000584287 ADAMTS2O95450 1211 aa7.32□□□□□ -1.24
ARHGAP28-214ENST00000584287 FOXR1Q6PIV2 292 aa7.32□□□□□ -1.24
ARHGAP28-214ENST00000584287 TSEN2Q8NCE0 465 aaKnown RBP7.32□□□□□ -1.24
ARHGAP28-214ENST00000584287 CRISPLD1Q9H336 500 aa7.32□□□□□ -1.24
ARHGAP28-214ENST00000584287 CSB-PGBD3P0DP91 1061 aa7.31□□□□□ -1.24
ARHGAP28-214ENST00000584287 TXLNAP40222 546 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms