RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TLR1Q15399 786 aa7.93□□□□□ -1.14
PPP4R1-227ENST00000583988 GNASQ5JWF2 1037 aa7.93□□□□□ -1.14
PPP4R1-227ENST00000583988 HDGFL1Q5TGJ6 251 aa7.93□□□□□ -1.14
PPP4R1-227ENST00000583988 FHDC1Q9C0D6 1143 aaPredicted RBP7.93□□□□□ -1.14
PPP4R1-227ENST00000583988 GPAMQ9HCL2 828 aa7.93□□□□□ -1.14
PPP4R1-227ENST00000583988 ZNF777Q9ULD5 760 aaPredicted RBP7.93□□□□□ -1.14
PPP4R1-227ENST00000583988 HRH3Q9Y5N1 445 aa7.93□□□□□ -1.14
PPP4R1-227ENST00000583988 H7C1W4 665 aa7.92□□□□□ -1.14
PPP4R1-227ENST00000583988 GDF10P55107 478 aa7.92□□□□□ -1.14
PPP4R1-227ENST00000583988 WDR44Q5JSH3 913 aa7.92□□□□□ -1.14
PPP4R1-227ENST00000583988 FOXR1Q6PIV2 292 aa7.92□□□□□ -1.14
PPP4R1-227ENST00000583988 ADAMTS19Q8TE59 1207 aa7.92□□□□□ -1.14
PPP4R1-227ENST00000583988 GTPBP3Q969Y2 492 aaKnown RBP7.92□□□□□ -1.14
PPP4R1-227ENST00000583988 F11P03951 625 aa7.91□□□□□ -1.14
PPP4R1-227ENST00000583988 INHAP05111 366 aa7.91□□□□□ -1.14
PPP4R1-227ENST00000583988 SCNN1DP51172 638 aa7.91□□□□□ -1.14
PPP4R1-227ENST00000583988 EML3Q32P44 896 aa7.91□□□□□ -1.14
PPP4R1-227ENST00000583988 C4orf17Q53FE4 359 aa7.91□□□□□ -1.14
PPP4R1-227ENST00000583988 DEPDC4Q8N2C3 294 aa7.91□□□□□ -1.14
PPP4R1-227ENST00000583988 GMCL1Q96IK5 515 aa7.91□□□□□ -1.14
PPP4R1-227ENST00000583988 SERTAD1Q9UHV2 236 aa7.91□□□□□ -1.14
PPP4R1-227ENST00000583988 GAS6Q14393 721 aa7.9□□□□□ -1.14
PPP4R1-227ENST00000583988 SVOPQ8N4V2 548 aa7.9□□□□□ -1.14
PPP4R1-227ENST00000583988 NUCKS1Q9H1E3 243 aaKnown RBP7.9□□□□□ -1.14
PPP4R1-227ENST00000583988 A0A1B0GTH6 734 aa7.89□□□□□ -1.15
PPP4R1-227ENST00000583988 PSME1Q06323 249 aa7.89□□□□□ -1.15
PPP4R1-227ENST00000583988 NCOA4Q13772 614 aa7.89□□□□□ -1.15
PPP4R1-227ENST00000583988 RHBDD1Q8TEB9 315 aa7.89□□□□□ -1.15
PPP4R1-227ENST00000583988 GLMNQ92990 594 aa7.89□□□□□ -1.15
PPP4R1-227ENST00000583988 TRERF1Q96PN7 1200 aa7.89□□□□□ -1.15
PPP4R1-227ENST00000583988 NOD1Q9Y239 953 aa7.89□□□□□ -1.15
PPP4R1-227ENST00000583988 USP17L5A8MUK1 530 aa7.88□□□□□ -1.15
PPP4R1-227ENST00000583988 ADAMTS2O95450 1211 aa7.88□□□□□ -1.15
PPP4R1-227ENST00000583988 SLURP2P0DP57 97 aa7.88□□□□□ -1.15
PPP4R1-227ENST00000583988 PPARGC1BQ86YN6 1023 aaKnown RBP7.88□□□□□ -1.15
PPP4R1-227ENST00000583988 NFATC2IPQ8NCF5 419 aa7.88□□□□□ -1.15
PPP4R1-227ENST00000583988 WHAMMQ8TF30 809 aa7.88□□□□□ -1.15
PPP4R1-227ENST00000583988 CALR3Q96L12 384 aaKnown RBP7.88□□□□□ -1.15
PPP4R1-227ENST00000583988 PCDHGA11Q9Y5H2 935 aa7.88□□□□□ -1.15
PPP4R1-227ENST00000583988 CSB-PGBD3P0DP91 1061 aa7.87□□□□□ -1.15
PPP4R1-227ENST00000583988 PLA2G4AP47712 749 aa7.87□□□□□ -1.15
PPP4R1-227ENST00000583988 SMTNP53814 917 aa7.87□□□□□ -1.15
PPP4R1-227ENST00000583988 SRSF11Q05519 484 aaKnown RBP7.87□□□□□ -1.15
PPP4R1-227ENST00000583988 ZNF385CQ66K41 422 aaPredicted RBP7.87□□□□□ -1.15
PPP4R1-227ENST00000583988 PGBD3Q8N328 593 aa7.87□□□□□ -1.15
PPP4R1-227ENST00000583988 RUBCNLQ9H714 662 aa7.87□□□□□ -1.15
PPP4R1-227ENST00000583988 TMEM229AB2RXF0 380 aa7.86□□□□□ -1.15
PPP4R1-227ENST00000583988 MSX1P28360 303 aa7.86□□□□□ -1.15
PPP4R1-227ENST00000583988 GTF2IP78347 998 aa7.86□□□□□ -1.15
PPP4R1-227ENST00000583988 AIDAQ96BJ3 306 aa7.86□□□□□ -1.15
PPP4R1-227ENST00000583988 MBIPQ9NS73 344 aa7.86□□□□□ -1.15
PPP4R1-227ENST00000583988 LZTS3O60299 673 aaPredicted RBP7.85□□□□□ -1.15
PPP4R1-227ENST00000583988 TBC1D9Q6ZT07 1266 aa7.85□□□□□ -1.15
PPP4R1-227ENST00000583988 ARID3CA6NKF2 412 aa7.84□□□□□ -1.15
PPP4R1-227ENST00000583988 THBS1P07996 1170 aa7.84□□□□□ -1.15
PPP4R1-227ENST00000583988 LYPD4Q6UWN0 246 aa7.84□□□□□ -1.15
PPP4R1-227ENST00000583988 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
PPP4R1-227ENST00000583988 UCN2Q96RP3 112 aa7.84□□□□□ -1.15
PPP4R1-227ENST00000583988 NIFKQ9BYG3 293 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-227ENST00000583988 ADAMTS8Q9UP79 889 aa7.84□□□□□ -1.15
PPP4R1-227ENST00000583988 IGF1RP08069 1367 aa7.84□□□□□ -1.16
PPP4R1-227ENST00000583988 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
PPP4R1-227ENST00000583988 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
PPP4R1-227ENST00000583988 A6NJY4 79 aa7.83□□□□□ -1.16
PPP4R1-227ENST00000583988 MX2P20592 715 aa7.83□□□□□ -1.16
PPP4R1-227ENST00000583988 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
PPP4R1-227ENST00000583988 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
PPP4R1-227ENST00000583988 SLC4A9Q96Q91 983 aa7.83□□□□□ -1.16
PPP4R1-227ENST00000583988 USP3Q9Y6I4 520 aa7.83□□□□□ -1.16
PPP4R1-227ENST00000583988 BACH1O14867 736 aa7.82□□□□□ -1.16
PPP4R1-227ENST00000583988 ATP9BO43861 1147 aa7.82□□□□□ -1.16
PPP4R1-227ENST00000583988 MAP3K10Q02779 954 aa7.82□□□□□ -1.16
PPP4R1-227ENST00000583988 EFHC2Q5JST6 749 aa7.82□□□□□ -1.16
PPP4R1-227ENST00000583988 C1orf115Q9H7X2 142 aa7.82□□□□□ -1.16
PPP4R1-227ENST00000583988 ZNF358Q9NW07 568 aa7.82□□□□□ -1.16
PPP4R1-227ENST00000583988 CABP1Q9NZU7 370 aa7.82□□□□□ -1.16
PPP4R1-227ENST00000583988 TFIP11Q9UBB9 837 aaKnown RBP7.82□□□□□ -1.16
PPP4R1-227ENST00000583988 SUPT5HO00267 1087 aaKnown RBP7.81□□□□□ -1.16
PPP4R1-227ENST00000583988 CDK2AP1O14519 115 aa7.81□□□□□ -1.16
PPP4R1-227ENST00000583988 CELA2BP08218 269 aaPredicted RBP7.81□□□□□ -1.16
PPP4R1-227ENST00000583988 TRIM50Q86XT4 487 aa7.81□□□□□ -1.16
PPP4R1-227ENST00000583988 TPCN2Q8NHX9 752 aa7.81□□□□□ -1.16
PPP4R1-227ENST00000583988 PPP1R12CQ9BZL4 782 aa7.81□□□□□ -1.16
PPP4R1-227ENST00000583988 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
PPP4R1-227ENST00000583988 PALM3A6NDB9 673 aaPredicted RBP7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 MTFR1Q15390 333 aa7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 NBPF1Q3BBV0 1214 aa7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 ARSJQ5FYB0 599 aaPredicted RBP7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 PLEKHM2Q8IWE5 1019 aa7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 CFHR5Q9BXR6 569 aa7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 SERPINA10Q9UK55 444 aa7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 NSFL1CQ9UNZ2 370 aaKnown RBP7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 IQSEC3Q9UPP2 1182 aaPredicted RBP7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 PHF24Q9UPV7 400 aa7.8□□□□□ -1.16
PPP4R1-227ENST00000583988 ARHGEF15O94989 841 aa7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 ATP4AP20648 1035 aa7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 ATP1A2P50993 1020 aa7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 CLDN10P78369 228 aa7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 LBRQ14739 615 aaKnown RBP7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 TBCELQ5QJ74 424 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms