RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
NUP85-223ENST00000583877 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
NUP85-223ENST00000583877 CYP27B1O15528 508 aa12.23□□□□□ -0.45
NUP85-223ENST00000583877 HSPA6P17066 643 aa12.23□□□□□ -0.45
NUP85-223ENST00000583877 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
NUP85-223ENST00000583877 PCNTO95613 3336 aa12.23□□□□□ -0.45
NUP85-223ENST00000583877 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
NUP85-223ENST00000583877 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
NUP85-223ENST00000583877 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
NUP85-223ENST00000583877 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
NUP85-223ENST00000583877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.21□□□□□ -0.45
NUP85-223ENST00000583877 SSFA2P28290 1259 aa12.21□□□□□ -0.45
NUP85-223ENST00000583877 TMF1P82094 1093 aa12.21□□□□□ -0.45
NUP85-223ENST00000583877 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
NUP85-223ENST00000583877 MYH14Q7Z406 1995 aaKnown RBP12.21□□□□□ -0.46
NUP85-223ENST00000583877 PHF14O94880 888 aa12.2□□□□□ -0.46
NUP85-223ENST00000583877 ZNF526Q8TF50 670 aaPredicted RBP12.2□□□□□ -0.46
NUP85-223ENST00000583877 PIGBQ92521 554 aa12.2□□□□□ -0.46
NUP85-223ENST00000583877 SBF1O95248 1867 aa12.19□□□□□ -0.46
NUP85-223ENST00000583877 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
NUP85-223ENST00000583877 SIK1P57059 783 aa12.19□□□□□ -0.46
NUP85-223ENST00000583877 C4AP0C0L4 1744 aa12.19□□□□□ -0.46
NUP85-223ENST00000583877 VIRMAQ69YN4 1812 aaKnown RBP12.18□□□□□ -0.46
NUP85-223ENST00000583877 ABCB7O75027 752 aa12.18□□□□□ -0.46
NUP85-223ENST00000583877 LINC00116Q8NCU8 138 aa12.18□□□□□ -0.46
NUP85-223ENST00000583877 SPG7Q9UQ90 795 aa12.18□□□□□ -0.46
NUP85-223ENST00000583877 KIF3CO14782 793 aa12.17□□□□□ -0.46
NUP85-223ENST00000583877 CDCA8Q53HL2 280 aa12.17□□□□□ -0.46
NUP85-223ENST00000583877 SMIM5Q71RC9 77 aa12.17□□□□□ -0.46
NUP85-223ENST00000583877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.46
NUP85-223ENST00000583877 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
NUP85-223ENST00000583877 WWC3Q9ULE0 1092 aa12.17□□□□□ -0.46
NUP85-223ENST00000583877 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
NUP85-223ENST00000583877 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
NUP85-223ENST00000583877 WDR90Q96KV7 1748 aa12.17□□□□□ -0.46
NUP85-223ENST00000583877 PXDNLA1KZ92 1463 aa12.15□□□□□ -0.46
NUP85-223ENST00000583877 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
NUP85-223ENST00000583877 CCDC88AQ3V6T2 1871 aa12.15□□□□□ -0.46
NUP85-223ENST00000583877 GNPATO15228 680 aa12.15□□□□□ -0.46
NUP85-223ENST00000583877 ATP6V1AP38606 617 aa12.15□□□□□ -0.46
NUP85-223ENST00000583877 ITPK1Q13572 414 aa12.15□□□□□ -0.46
NUP85-223ENST00000583877 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
NUP85-223ENST00000583877 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
NUP85-223ENST00000583877 MMP10P09238 476 aa12.14□□□□□ -0.47
NUP85-223ENST00000583877 IFNL2Q8IZJ0 200 aa12.14□□□□□ -0.47
NUP85-223ENST00000583877 PLEKHG2Q9H7P9 1386 aa12.14□□□□□ -0.47
NUP85-223ENST00000583877 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
NUP85-223ENST00000583877 PHKG2P15735 406 aa12.13□□□□□ -0.47
NUP85-223ENST00000583877 APLP1P51693 650 aa12.13□□□□□ -0.47
NUP85-223ENST00000583877 TGFB2P61812 414 aa12.13□□□□□ -0.47
NUP85-223ENST00000583877 EYA1Q99502 592 aa12.13□□□□□ -0.47
NUP85-223ENST00000583877 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
NUP85-223ENST00000583877 KDRP35968 1356 aa12.13□□□□□ -0.47
NUP85-223ENST00000583877 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
NUP85-223ENST00000583877 TOMM70O94826 608 aa12.12□□□□□ -0.47
NUP85-223ENST00000583877 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
NUP85-223ENST00000583877 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
NUP85-223ENST00000583877 TNRC6CQ9HCJ0 1690 aaKnown RBP12.12□□□□□ -0.47
NUP85-223ENST00000583877 SCN11AQ9UI33 1791 aa12.12□□□□□ -0.47
NUP85-223ENST00000583877 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
NUP85-223ENST00000583877 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
NUP85-223ENST00000583877 A0A0G2JLW4 131 aa12.1□□□□□ -0.47
NUP85-223ENST00000583877 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
NUP85-223ENST00000583877 POLKQ9UBT6 870 aa12.1□□□□□ -0.47
NUP85-223ENST00000583877 BCS1LQ9Y276 419 aa12.1□□□□□ -0.47
NUP85-223ENST00000583877 TJP1Q07157 1748 aa12.1□□□□□ -0.47
NUP85-223ENST00000583877 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
NUP85-223ENST00000583877 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
NUP85-223ENST00000583877 CCDC87Q9NVE4 849 aa12.09□□□□□ -0.47
NUP85-223ENST00000583877 CNTNAP4Q9C0A0 1308 aa12.09□□□□□ -0.47
NUP85-223ENST00000583877 DLEC1Q9Y238 1755 aa12.08□□□□□ -0.48
NUP85-223ENST00000583877 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
NUP85-223ENST00000583877 GYS1P13807 737 aa12.08□□□□□ -0.48
NUP85-223ENST00000583877 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
NUP85-223ENST00000583877 ARHGAP27Q6ZUM4 889 aa12.08□□□□□ -0.48
NUP85-223ENST00000583877 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
NUP85-223ENST00000583877 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
NUP85-223ENST00000583877 RPS6KA4O75676 772 aa12.07□□□□□ -0.48
NUP85-223ENST00000583877 FCHSD2O94868 740 aa12.07□□□□□ -0.48
NUP85-223ENST00000583877 HSP90AB1P08238 724 aaKnown RBP12.07□□□□□ -0.48
NUP85-223ENST00000583877 DPEP1P16444 411 aa12.07□□□□□ -0.48
NUP85-223ENST00000583877 RFC4P35249 363 aa12.07□□□□□ -0.48
NUP85-223ENST00000583877 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
NUP85-223ENST00000583877 DCAF5Q96JK2 942 aa12.07□□□□□ -0.48
NUP85-223ENST00000583877 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
NUP85-223ENST00000583877 NMRK2Q9NPI5 230 aa12.07□□□□□ -0.48
NUP85-223ENST00000583877 PARP3Q9Y6F1 533 aa12.07□□□□□ -0.48
NUP85-223ENST00000583877 DICER1Q9UPY3 1922 aaKnown RBP12.06□□□□□ -0.48
NUP85-223ENST00000583877 KCNA3P22001 575 aa12.06□□□□□ -0.48
NUP85-223ENST00000583877 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
NUP85-223ENST00000583877 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
NUP85-223ENST00000583877 DSG3P32926 999 aa12.05□□□□□ -0.48
NUP85-223ENST00000583877 NRXN2Q9P2S2 1712 aa12.04□□□□□ -0.48
NUP85-223ENST00000583877 PLEKHO1Q53GL0 409 aaPredicted RBP12.04□□□□□ -0.48
NUP85-223ENST00000583877 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
NUP85-223ENST00000583877 C16orf71Q8IYS4 520 aaPredicted RBP12.04□□□□□ -0.48
NUP85-223ENST00000583877 PIM2Q9P1W9 311 aa12.04□□□□□ -0.48
NUP85-223ENST00000583877 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
NUP85-223ENST00000583877 KCPQ6ZWJ8 1503 aa12.03□□□□□ -0.48
NUP85-223ENST00000583877 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms