RNA–Protein interactions for RNA: ENST00000583840.1

LINC00668-208, long intergenic non-protein coding RNA 668, human

Gene LINC00668, Length 586 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00668-208	ENST00000583840	SSFA2	P28290	1259 aa		32.47	■■■□□ 2.79
LINC00668-208	ENST00000583840	NPC1L1	Q9UHC9	1359 aa		32.46	■■■□□ 2.79
LINC00668-208	ENST00000583840	PHF14	O94880	888 aa		32.46	■■■□□ 2.79
LINC00668-208	ENST00000583840	MSL1	Q68DK7	614 aa		32.46	■■■□□ 2.79
LINC00668-208	ENST00000583840	LINC00116	Q8NCU8	138 aa		32.46	■■■□□ 2.79
LINC00668-208	ENST00000583840	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.45	■■■□□ 2.79
LINC00668-208	ENST00000583840	GPR162	Q16538	588 aa		32.45	■■■□□ 2.79
LINC00668-208	ENST00000583840	DIAPH1	O60610	1272 aa	Known RBP	32.43	■■■□□ 2.78
LINC00668-208	ENST00000583840	RBM42	Q9BTD8	480 aa	Known RBP	32.43	■■■□□ 2.78
LINC00668-208	ENST00000583840	KDM6A	O15550	1401 aa	Predicted RBP	32.43	■■■□□ 2.78
LINC00668-208	ENST00000583840	GNPAT	O15228	680 aa		32.42	■■■□□ 2.78
LINC00668-208	ENST00000583840	ITPK1	Q13572	414 aa		32.42	■■■□□ 2.78
LINC00668-208	ENST00000583840	AKAP4	Q5JQC9	854 aa		32.4	■■■□□ 2.78
LINC00668-208	ENST00000583840	UTRN	P46939	3433 aa		32.4	■■■□□ 2.78
LINC00668-208	ENST00000583840	PELP1	Q8IZL8	1130 aa	Known RBP	32.38	■■■□□ 2.77
LINC00668-208	ENST00000583840	UBR3	Q6ZT12	1888 aa		32.37	■■■□□ 2.77
LINC00668-208	ENST00000583840	HMOX1	P09601	288 aa		32.36	■■■□□ 2.77
LINC00668-208	ENST00000583840	AMIGO3	Q86WK7	504 aa		32.36	■■■□□ 2.77
LINC00668-208	ENST00000583840	NFATC2IP	Q8NCF5	419 aa		32.36	■■■□□ 2.77
LINC00668-208	ENST00000583840	NLGN2	Q8NFZ4	835 aa		32.36	■■■□□ 2.77
LINC00668-208	ENST00000583840	RTCB	Q9Y3I0	505 aa	Known RBP	32.36	■■■□□ 2.77
LINC00668-208	ENST00000583840	CD2AP	Q9Y5K6	639 aa		32.36	■■■□□ 2.77
LINC00668-208	ENST00000583840	CNGB1	Q14028	1251 aa	Predicted RBP	32.35	■■■□□ 2.77
LINC00668-208	ENST00000583840	RC3H1	Q5TC82	1133 aa	Known RBP	32.34	■■■□□ 2.77
LINC00668-208	ENST00000583840	ZNF831	Q5JPB2	1677 aa		32.34	■■■□□ 2.77
LINC00668-208	ENST00000583840	TRAPPC3L	Q5T215	181 aa		32.32	■■■□□ 2.76
LINC00668-208	ENST00000583840	SMIM5	Q71RC9	77 aa		32.31	■■■□□ 2.76
LINC00668-208	ENST00000583840	SLC4A9	Q96Q91	983 aa		32.31	■■■□□ 2.76
LINC00668-208	ENST00000583840	CNTNAP4	Q9C0A0	1308 aa		32.3	■■■□□ 2.76
LINC00668-208	ENST00000583840	PTCD1	O75127	700 aa	Known RBP	32.3	■■■□□ 2.76
LINC00668-208	ENST00000583840	ADRA2B	P18089	450 aa		32.3	■■■□□ 2.76
LINC00668-208	ENST00000583840	GRIN3B	O60391	1043 aa		32.29	■■■□□ 2.76
LINC00668-208	ENST00000583840	U2SURP	O15042	1029 aa	Known RBP	32.28	■■■□□ 2.76
LINC00668-208	ENST00000583840	CFAP53	Q96M91	514 aa		32.28	■■■□□ 2.76
LINC00668-208	ENST00000583840	SLC52A2	Q9HAB3	445 aa		32.28	■■■□□ 2.76
LINC00668-208	ENST00000583840	GOLGB1	Q14789	3259 aa	Known RBP	32.26	■■■□□ 2.76
LINC00668-208	ENST00000583840	RNMT	O43148	476 aa	Known RBP	32.25	■■■□□ 2.75
LINC00668-208	ENST00000583840	RPS6KA4	O75676	772 aa		32.25	■■■□□ 2.75
LINC00668-208	ENST00000583840	MTHFSD	Q2M296	383 aa	Known RBP	32.25	■■■□□ 2.75
LINC00668-208	ENST00000583840	CHD4	Q14839	1912 aa		32.25	■■■□□ 2.75
LINC00668-208	ENST00000583840	SCN11A	Q9UI33	1791 aa		32.24	■■■□□ 2.75
LINC00668-208	ENST00000583840	RFC4	P35249	363 aa		32.24	■■■□□ 2.75
LINC00668-208	ENST00000583840	NLGN1	Q8N2Q7	840 aa		32.24	■■■□□ 2.75
LINC00668-208	ENST00000583840	LGR6	Q9HBX8	967 aa		32.23	■■■□□ 2.75
LINC00668-208	ENST00000583840	COL3A1	P02461	1466 aa	Predicted RBP	32.22	■■■□□ 2.75
LINC00668-208	ENST00000583840	COL5A3	P25940	1745 aa	Predicted RBP	32.21	■■■□□ 2.75
LINC00668-208	ENST00000583840	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.21	■■■□□ 2.75
LINC00668-208	ENST00000583840	ARHGEF1	Q92888	912 aa	Known RBP	32.21	■■■□□ 2.75
LINC00668-208	ENST00000583840	MMP10	P09238	476 aa		32.2	■■■□□ 2.75
LINC00668-208	ENST00000583840	CRKL	P46109	303 aa	Known RBP	32.2	■■■□□ 2.75
LINC00668-208	ENST00000583840	GAS2L2	Q8NHY3	880 aa		32.2	■■■□□ 2.75
LINC00668-208	ENST00000583840	NUDC	Q9Y266	331 aa		32.2	■■■□□ 2.75
LINC00668-208	ENST00000583840	MRC1	P22897	1456 aa		32.18	■■■□□ 2.74
LINC00668-208	ENST00000583840	YBX3	P16989	372 aa	Known RBP eCLIP	32.17	■■■□□ 2.74
LINC00668-208	ENST00000583840	GNAT3	A8MTJ3	354 aa		32.14	■■■□□ 2.74
LINC00668-208	ENST00000583840	GYS1	P13807	737 aa		32.13	■■■□□ 2.73
LINC00668-208	ENST00000583840	CIC	Q96RK0	1608 aa	Predicted RBP	32.13	■■■□□ 2.73
LINC00668-208	ENST00000583840	TEF	Q10587	303 aa		32.12	■■■□□ 2.73
LINC00668-208	ENST00000583840	SLC39A6	Q13433	755 aa		32.12	■■■□□ 2.73
LINC00668-208	ENST00000583840	TTC5	Q8N0Z6	440 aa		32.12	■■■□□ 2.73
LINC00668-208	ENST00000583840	PARP3	Q9Y6F1	533 aa		32.12	■■■□□ 2.73
LINC00668-208	ENST00000583840	PPP2R1A	P30153	589 aa		32.11	■■■□□ 2.73
LINC00668-208	ENST00000583840	DNAJC10	Q8IXB1	793 aa		32.11	■■■□□ 2.73
LINC00668-208	ENST00000583840	CCDC87	Q9NVE4	849 aa		32.11	■■■□□ 2.73
LINC00668-208	ENST00000583840	VSIG10	Q8N0Z9	540 aa		32.1	■■■□□ 2.73
LINC00668-208	ENST00000583840	ADAMTS7	Q9UKP4	1686 aa		32.1	■■■□□ 2.73
LINC00668-208	ENST00000583840	TJP1	Q07157	1748 aa		32.09	■■■□□ 2.73
LINC00668-208	ENST00000583840	INTS5	Q6P9B9	1019 aa	Known RBP	32.08	■■■□□ 2.73
LINC00668-208	ENST00000583840	MYH14	Q7Z406	1995 aa	Known RBP	32.08	■■■□□ 2.73
LINC00668-208	ENST00000583840	USP42	Q9H9J4	1324 aa	Known RBP	32.07	■■■□□ 2.72
LINC00668-208	ENST00000583840	PRKAR2B	P31323	418 aa		32.07	■■■□□ 2.72
LINC00668-208	ENST00000583840	TGFB2	P61812	414 aa		32.07	■■■□□ 2.72
LINC00668-208	ENST00000583840	ZPR1	O75312	459 aa		32.06	■■■□□ 2.72
LINC00668-208	ENST00000583840	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.06	■■■□□ 2.72
LINC00668-208	ENST00000583840	CYP19A1	P11511	503 aa	Predicted RBP	32.06	■■■□□ 2.72
LINC00668-208	ENST00000583840	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
LINC00668-208	ENST00000583840	RSPH6A	Q9H0K4	717 aa		32.05	■■■□□ 2.72
LINC00668-208	ENST00000583840	VIRMA	Q69YN4	1812 aa	Known RBP	32.04	■■■□□ 2.72
LINC00668-208	ENST00000583840	KCP	Q6ZWJ8	1503 aa		32.04	■■■□□ 2.72
LINC00668-208	ENST00000583840	STARD3NL	O95772	234 aa		32.03	■■■□□ 2.72
LINC00668-208	ENST00000583840	IL17RE	Q8NFR9	667 aa		32.03	■■■□□ 2.72
LINC00668-208	ENST00000583840	C4A	P0C0L4	1744 aa		32.03	■■■□□ 2.72
LINC00668-208	ENST00000583840	FCHSD2	O94868	740 aa		32.02	■■■□□ 2.72
LINC00668-208	ENST00000583840	SRP68	Q9UHB9	627 aa	Known RBP	32.02	■■■□□ 2.72
LINC00668-208	ENST00000583840	SOS1	Q07889	1333 aa	Predicted RBP	32.01	■■■□□ 2.72
LINC00668-208	ENST00000583840	C10orf71	Q711Q0	1435 aa		32.01	■■■□□ 2.72
LINC00668-208	ENST00000583840	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.01	■■■□□ 2.71
LINC00668-208	ENST00000583840	ZNF790	Q6PG37	636 aa		32	■■■□□ 2.71
LINC00668-208	ENST00000583840	PHACTR3	Q96KR7	559 aa		32	■■■□□ 2.71
LINC00668-208	ENST00000583840	WWC3	Q9ULE0	1092 aa		32	■■■□□ 2.71
LINC00668-208	ENST00000583840	FKBP8	Q14318	412 aa		31.99	■■■□□ 2.71
LINC00668-208	ENST00000583840	RTF1	Q92541	710 aa	Known RBP	31.99	■■■□□ 2.71
LINC00668-208	ENST00000583840	PXDNL	A1KZ92	1463 aa		31.98	■■■□□ 2.71
LINC00668-208	ENST00000583840	COL15A1	P39059	1388 aa		31.97	■■■□□ 2.71
LINC00668-208	ENST00000583840	CEMIP	Q8WUJ3	1361 aa		31.97	■■■□□ 2.71
LINC00668-208	ENST00000583840	NEFM	P07197	916 aa		31.97	■■■□□ 2.71
LINC00668-208	ENST00000583840	ZBTB1	Q9Y2K1	713 aa		31.97	■■■□□ 2.71
LINC00668-208	ENST00000583840	KIF13B	Q9NQT8	1826 aa		31.96	■■■□□ 2.71
LINC00668-208	ENST00000583840	USPL1	Q5W0Q7	1092 aa		31.96	■■■□□ 2.71
LINC00668-208	ENST00000583840	NARF	Q9UHQ1	456 aa		31.96	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms