RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 EIF4A2Q14240 407 aaKnown RBP28.23■■■□□ 2.11
SRSF1-206ENST00000583741 ATP6V1AP38606 617 aa28.22■■■□□ 2.11
SRSF1-206ENST00000583741 ATG3Q9NT62 314 aa28.22■■■□□ 2.11
SRSF1-206ENST00000583741 TNNT2P45379 298 aaPredicted RBP28.21■■■□□ 2.11
SRSF1-206ENST00000583741 KDRP35968 1356 aa28.21■■■□□ 2.11
SRSF1-206ENST00000583741 GPBP1L1Q9HC44 474 aaPredicted RBP28.21■■■□□ 2.11
SRSF1-206ENST00000583741 KIAA1551Q9HCM1 1747 aa28.2■■■□□ 2.11
SRSF1-206ENST00000583741 KIF13BQ9NQT8 1826 aa28.19■■■□□ 2.1
SRSF1-206ENST00000583741 ZNF526Q8TF50 670 aaPredicted RBP28.19■■■□□ 2.1
SRSF1-206ENST00000583741 COL5A3P25940 1745 aaPredicted RBP28.18■■■□□ 2.1
SRSF1-206ENST00000583741 ZNF831Q5JPB2 1677 aa28.18■■■□□ 2.1
SRSF1-206ENST00000583741 POLR3GLQ9BT43 218 aa28.18■■■□□ 2.1
SRSF1-206ENST00000583741 CICQ96RK0 1608 aaPredicted RBP28.17■■■□□ 2.1
SRSF1-206ENST00000583741 PLEKHG2Q9H7P9 1386 aa28.17■■■□□ 2.1
SRSF1-206ENST00000583741 SLC4A9Q96Q91 983 aa28.16■■■□□ 2.1
SRSF1-206ENST00000583741 MMP10P09238 476 aa28.15■■■□□ 2.1
SRSF1-206ENST00000583741 N4BP2Q86UW6 1770 aaPredicted RBP28.15■■■□□ 2.1
SRSF1-206ENST00000583741 PXDNLA1KZ92 1463 aa28.14■■■□□ 2.1
SRSF1-206ENST00000583741 KDM6AO15550 1401 aaPredicted RBP28.12■■■□□ 2.09
SRSF1-206ENST00000583741 MYH14Q7Z406 1995 aaKnown RBP28.11■■■□□ 2.09
SRSF1-206ENST00000583741 C4AP0C0L4 1744 aa28.11■■■□□ 2.09
SRSF1-206ENST00000583741 ERVV-2B6SEH9 535 aa28.1■■■□□ 2.09
SRSF1-206ENST00000583741 RTCBQ9Y3I0 505 aaKnown RBP28.1■■■□□ 2.09
SRSF1-206ENST00000583741 TRAPPC3LQ5T215 181 aa28.09■■■□□ 2.09
SRSF1-206ENST00000583741 DCAF5Q96JK2 942 aa28.09■■■□□ 2.09
SRSF1-206ENST00000583741 RBM42Q9BTD8 480 aaKnown RBP28.09■■■□□ 2.09
SRSF1-206ENST00000583741 C10orf71Q711Q0 1435 aa28.09■■■□□ 2.09
SRSF1-206ENST00000583741 ARHGEF1Q92888 912 aaKnown RBP28.07■■■□□ 2.08
SRSF1-206ENST00000583741 BRCA1P38398 1863 aaKnown RBP28.06■■■□□ 2.08
SRSF1-206ENST00000583741 ZNF530Q6P9A1 599 aaPredicted RBP28.06■■■□□ 2.08
SRSF1-206ENST00000583741 PANK3Q9H999 370 aa28.06■■■□□ 2.08
SRSF1-206ENST00000583741 CNTNAP4Q9C0A0 1308 aa28.06■■■□□ 2.08
SRSF1-206ENST00000583741 HSP90AB1P08238 724 aaKnown RBP28.05■■■□□ 2.08
SRSF1-206ENST00000583741 HSPA6P17066 643 aa28.05■■■□□ 2.08
SRSF1-206ENST00000583741 NLGN1Q8N2Q7 840 aa28.05■■■□□ 2.08
SRSF1-206ENST00000583741 ADRA2BP18089 450 aa28.04■■■□□ 2.08
SRSF1-206ENST00000583741 PLEKHO1Q53GL0 409 aaPredicted RBP28.04■■■□□ 2.08
SRSF1-206ENST00000583741 RC3H1Q5TC82 1133 aaKnown RBP28.04■■■□□ 2.08
SRSF1-206ENST00000583741 AEBP1Q8IUX7 1158 aa28.04■■■□□ 2.08
SRSF1-206ENST00000583741 A0A0G2JLW4 131 aa28.03■■■□□ 2.08
SRSF1-206ENST00000583741 KIF3CO14782 793 aa28.03■■■□□ 2.08
SRSF1-206ENST00000583741 GYS1P13807 737 aa28.03■■■□□ 2.08
SRSF1-206ENST00000583741 CABP4P57796 275 aa28.02■■■□□ 2.08
SRSF1-206ENST00000583741 TGFB2P61812 414 aa28.02■■■□□ 2.08
SRSF1-206ENST00000583741 TJP1Q07157 1748 aa28.02■■■□□ 2.08
SRSF1-206ENST00000583741 RPS6KA4O75676 772 aa28.02■■■□□ 2.08
SRSF1-206ENST00000583741 BCS1LQ9Y276 419 aa28.02■■■□□ 2.08
SRSF1-206ENST00000583741 HSPA5P11021 654 aaKnown RBP28.01■■■□□ 2.07
SRSF1-206ENST00000583741 AMOTQ4VCS5 1084 aa28.01■■■□□ 2.07
SRSF1-206ENST00000583741 RFC4P35249 363 aa28■■■□□ 2.07
SRSF1-206ENST00000583741 DPEP1P16444 411 aa27.99■■■□□ 2.07
SRSF1-206ENST00000583741 SCN11AQ9UI33 1791 aa27.98■■■□□ 2.07
SRSF1-206ENST00000583741 PTCD1O75127 700 aaKnown RBP27.98■■■□□ 2.07
SRSF1-206ENST00000583741 MTHFSP49914 203 aa27.98■■■□□ 2.07
SRSF1-206ENST00000583741 EIF4G2P78344 907 aaKnown RBP eCLIP27.98■■■□□ 2.07
SRSF1-206ENST00000583741 IFFO2Q5TF58 517 aa27.98■■■□□ 2.07
SRSF1-206ENST00000583741 CCDC87Q9NVE4 849 aa27.98■■■□□ 2.07
SRSF1-206ENST00000583741 ARFGEF1Q9Y6D6 1849 aa27.97■■■□□ 2.07
SRSF1-206ENST00000583741 PARP3Q9Y6F1 533 aa27.96■■■□□ 2.07
SRSF1-206ENST00000583741 C1orf141Q5JVX7 400 aa27.95■■■□□ 2.07
SRSF1-206ENST00000583741 MORC1Q86VD1 984 aa27.95■■■□□ 2.07
SRSF1-206ENST00000583741 NFATC2IPQ8NCF5 419 aa27.95■■■□□ 2.07
SRSF1-206ENST00000583741 CRKLP46109 303 aaKnown RBP27.95■■■□□ 2.06
SRSF1-206ENST00000583741 ADAMTS7Q9UKP4 1686 aa27.94■■■□□ 2.06
SRSF1-206ENST00000583741 SULT6B1Q6IMI4 303 aa27.94■■■□□ 2.06
SRSF1-206ENST00000583741 SRP68Q9UHB9 627 aaKnown RBP27.94■■■□□ 2.06
SRSF1-206ENST00000583741 KCNA3P22001 575 aa27.93■■■□□ 2.06
SRSF1-206ENST00000583741 ARHGAP27Q6ZUM4 889 aa27.93■■■□□ 2.06
SRSF1-206ENST00000583741 FCHSD2O94868 740 aa27.92■■■□□ 2.06
SRSF1-206ENST00000583741 USP42Q9H9J4 1324 aaKnown RBP27.91■■■□□ 2.06
SRSF1-206ENST00000583741 VIRMAQ69YN4 1812 aaKnown RBP27.91■■■□□ 2.06
SRSF1-206ENST00000583741 FKBP8Q14318 412 aa27.9■■■□□ 2.06
SRSF1-206ENST00000583741 IL13P35225 146 aa27.89■■■□□ 2.06
SRSF1-206ENST00000583741 DDR1Q08345 913 aa27.89■■■□□ 2.06
SRSF1-206ENST00000583741 NMRK2Q9NPI5 230 aa27.88■■■□□ 2.05
SRSF1-206ENST00000583741 INTS5Q6P9B9 1019 aaKnown RBP27.87■■■□□ 2.05
SRSF1-206ENST00000583741 TOMM70O94826 608 aa27.85■■■□□ 2.05
SRSF1-206ENST00000583741 MRC1P22897 1456 aa27.85■■■□□ 2.05
SRSF1-206ENST00000583741 PIM2Q9P1W9 311 aa27.84■■■□□ 2.05
SRSF1-206ENST00000583741 KNSTRNQ9Y448 316 aa27.84■■■□□ 2.05
SRSF1-206ENST00000583741 C9orf131Q5VYM1 1079 aa27.83■■■□□ 2.05
SRSF1-206ENST00000583741 AKAP4Q5JQC9 854 aa27.83■■■□□ 2.04
SRSF1-206ENST00000583741 DNAJC10Q8IXB1 793 aa27.83■■■□□ 2.04
SRSF1-206ENST00000583741 LGR6Q9HBX8 967 aa27.83■■■□□ 2.04
SRSF1-206ENST00000583741 POLRMTO00411 1230 aaKnown RBP27.82■■■□□ 2.04
SRSF1-206ENST00000583741 AMER1Q5JTC6 1135 aaPredicted RBP27.82■■■□□ 2.04
SRSF1-206ENST00000583741 SLC52A2Q9HAB3 445 aa27.82■■■□□ 2.04
SRSF1-206ENST00000583741 AFDNP55196 1824 aaKnown RBP27.82■■■□□ 2.04
SRSF1-206ENST00000583741 KCPQ6ZWJ8 1503 aa27.81■■■□□ 2.04
SRSF1-206ENST00000583741 SBF1O95248 1867 aa27.81■■■□□ 2.04
SRSF1-206ENST00000583741 CHRNA5P30532 468 aa27.81■■■□□ 2.04
SRSF1-206ENST00000583741 APLP1P51693 650 aa27.81■■■□□ 2.04
SRSF1-206ENST00000583741 DALRD3Q5D0E6 543 aaKnown RBP27.81■■■□□ 2.04
SRSF1-206ENST00000583741 TM4SF1P30408 202 aa27.8■■■□□ 2.04
SRSF1-206ENST00000583741 SOS1Q07889 1333 aaPredicted RBP27.8■■■□□ 2.04
SRSF1-206ENST00000583741 USPL1Q5W0Q7 1092 aa27.78■■■□□ 2.04
SRSF1-206ENST00000583741 WDR90Q96KV7 1748 aa27.78■■■□□ 2.04
SRSF1-206ENST00000583741 ZNF316A6NFI3 1004 aaPredicted RBP27.77■■■□□ 2.04
SRSF1-206ENST00000583741 SLC39A6Q13433 755 aa27.77■■■□□ 2.04
SRSF1-206ENST00000583741 NRXN2Q9P2S2 1712 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms