RNA–Protein interactions for RNA: ENST00000583410.1

ARHGAP28-213, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-213ENST00000583410 IFNL2Q8IZJ0 200 aa25.32■■□□□ 1.64
ARHGAP28-213ENST00000583410 EIF4A2Q14240 407 aaKnown RBP25.29■■□□□ 1.64
ARHGAP28-213ENST00000583410 SLC4A9Q96Q91 983 aa25.29■■□□□ 1.64
ARHGAP28-213ENST00000583410 CICQ96RK0 1608 aaPredicted RBP25.28■■□□□ 1.64
ARHGAP28-213ENST00000583410 COL5A3P25940 1745 aaPredicted RBP25.28■■□□□ 1.64
ARHGAP28-213ENST00000583410 KDRP35968 1356 aa25.28■■□□□ 1.64
ARHGAP28-213ENST00000583410 MYH14Q7Z406 1995 aaKnown RBP25.27■■□□□ 1.64
ARHGAP28-213ENST00000583410 MMP10P09238 476 aa25.27■■□□□ 1.64
ARHGAP28-213ENST00000583410 TNNT2P45379 298 aaPredicted RBP25.27■■□□□ 1.64
ARHGAP28-213ENST00000583410 IFFO2Q5TF58 517 aa25.27■■□□□ 1.64
ARHGAP28-213ENST00000583410 HSPA6P17066 643 aa25.26■■□□□ 1.63
ARHGAP28-213ENST00000583410 PXDNLA1KZ92 1463 aa25.26■■□□□ 1.63
ARHGAP28-213ENST00000583410 ZNF831Q5JPB2 1677 aa25.26■■□□□ 1.63
ARHGAP28-213ENST00000583410 KIF3CO14782 793 aa25.24■■□□□ 1.63
ARHGAP28-213ENST00000583410 BRCA1P38398 1863 aaKnown RBP25.23■■□□□ 1.63
ARHGAP28-213ENST00000583410 C4AP0C0L4 1744 aa25.22■■□□□ 1.63
ARHGAP28-213ENST00000583410 TRAPPC3LQ5T215 181 aa25.21■■□□□ 1.63
ARHGAP28-213ENST00000583410 POLR3GLQ9BT43 218 aa25.21■■□□□ 1.63
ARHGAP28-213ENST00000583410 RBM42Q9BTD8 480 aaKnown RBP25.21■■□□□ 1.63
ARHGAP28-213ENST00000583410 RTCBQ9Y3I0 505 aaKnown RBP25.21■■□□□ 1.63
ARHGAP28-213ENST00000583410 A0A0G2JLW4 131 aa25.2■■□□□ 1.62
ARHGAP28-213ENST00000583410 ERVV-2B6SEH9 535 aa25.2■■□□□ 1.62
ARHGAP28-213ENST00000583410 ARHGEF1Q92888 912 aaKnown RBP25.2■■□□□ 1.62
ARHGAP28-213ENST00000583410 KDM6AO15550 1401 aaPredicted RBP25.2■■□□□ 1.62
ARHGAP28-213ENST00000583410 C10orf71Q711Q0 1435 aa25.19■■□□□ 1.62
ARHGAP28-213ENST00000583410 GYS1P13807 737 aa25.17■■□□□ 1.62
ARHGAP28-213ENST00000583410 TGFB2P61812 414 aa25.17■■□□□ 1.62
ARHGAP28-213ENST00000583410 RC3H1Q5TC82 1133 aaKnown RBP25.17■■□□□ 1.62
ARHGAP28-213ENST00000583410 NLGN1Q8N2Q7 840 aa25.17■■□□□ 1.62
ARHGAP28-213ENST00000583410 BCS1LQ9Y276 419 aa25.17■■□□□ 1.62
ARHGAP28-213ENST00000583410 PLEKHG2Q9H7P9 1386 aa25.17■■□□□ 1.62
ARHGAP28-213ENST00000583410 DPEP1P16444 411 aa25.16■■□□□ 1.62
ARHGAP28-213ENST00000583410 TRIM26Q12899 539 aaPredicted RBP25.16■■□□□ 1.62
ARHGAP28-213ENST00000583410 DCAF5Q96JK2 942 aa25.16■■□□□ 1.62
ARHGAP28-213ENST00000583410 CNTNAP4Q9C0A0 1308 aa25.15■■□□□ 1.62
ARHGAP28-213ENST00000583410 RPS6KA4O75676 772 aa25.15■■□□□ 1.62
ARHGAP28-213ENST00000583410 ARFGEF1Q9Y6D6 1849 aa25.14■■□□□ 1.62
ARHGAP28-213ENST00000583410 ZNF530Q6P9A1 599 aaPredicted RBP25.14■■□□□ 1.62
ARHGAP28-213ENST00000583410 ADRA2BP18089 450 aa25.13■■□□□ 1.61
ARHGAP28-213ENST00000583410 PLEKHO1Q53GL0 409 aaPredicted RBP25.13■■□□□ 1.61
ARHGAP28-213ENST00000583410 AEBP1Q8IUX7 1158 aa25.13■■□□□ 1.61
ARHGAP28-213ENST00000583410 TJP1Q07157 1748 aa25.12■■□□□ 1.61
ARHGAP28-213ENST00000583410 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
ARHGAP28-213ENST00000583410 RFC4P35249 363 aa25.12■■□□□ 1.61
ARHGAP28-213ENST00000583410 CABP4P57796 275 aa25.12■■□□□ 1.61
ARHGAP28-213ENST00000583410 ARHGAP27Q6ZUM4 889 aa25.12■■□□□ 1.61
ARHGAP28-213ENST00000583410 CCDC87Q9NVE4 849 aa25.12■■□□□ 1.61
ARHGAP28-213ENST00000583410 KCNA3P22001 575 aa25.11■■□□□ 1.61
ARHGAP28-213ENST00000583410 PANK3Q9H999 370 aa25.11■■□□□ 1.61
ARHGAP28-213ENST00000583410 TIMELESSQ9UNS1 1208 aa25.11■■□□□ 1.61
ARHGAP28-213ENST00000583410 PTCD1O75127 700 aaKnown RBP25.1■■□□□ 1.61
ARHGAP28-213ENST00000583410 SCN11AQ9UI33 1791 aa25.1■■□□□ 1.61
ARHGAP28-213ENST00000583410 FCHSD2O94868 740 aa25.09■■□□□ 1.61
ARHGAP28-213ENST00000583410 SRP68Q9UHB9 627 aaKnown RBP25.09■■□□□ 1.61
ARHGAP28-213ENST00000583410 PARP3Q9Y6F1 533 aa25.09■■□□□ 1.61
ARHGAP28-213ENST00000583410 ADAMTS7Q9UKP4 1686 aa25.08■■□□□ 1.61
ARHGAP28-213ENST00000583410 MTHFSP49914 203 aa25.08■■□□□ 1.61
ARHGAP28-213ENST00000583410 AMOTQ4VCS5 1084 aa25.08■■□□□ 1.61
ARHGAP28-213ENST00000583410 NFATC2IPQ8NCF5 419 aa25.08■■□□□ 1.61
ARHGAP28-213ENST00000583410 NMRK2Q9NPI5 230 aa25.08■■□□□ 1.61
ARHGAP28-213ENST00000583410 VIRMAQ69YN4 1812 aaKnown RBP25.07■■□□□ 1.6
ARHGAP28-213ENST00000583410 CRKLP46109 303 aaKnown RBP25.07■■□□□ 1.6
ARHGAP28-213ENST00000583410 FKBP8Q14318 412 aa25.06■■□□□ 1.6
ARHGAP28-213ENST00000583410 SBF1O95248 1867 aa25.06■■□□□ 1.6
ARHGAP28-213ENST00000583410 TOMM70O94826 608 aa25.05■■□□□ 1.6
ARHGAP28-213ENST00000583410 DDR1Q08345 913 aa25.05■■□□□ 1.6
ARHGAP28-213ENST00000583410 HSPA5P11021 654 aaKnown RBP25.04■■□□□ 1.6
ARHGAP28-213ENST00000583410 APLP1P51693 650 aa25.03■■□□□ 1.6
ARHGAP28-213ENST00000583410 C9orf131Q5VYM1 1079 aa25.03■■□□□ 1.6
ARHGAP28-213ENST00000583410 SULT6B1Q6IMI4 303 aa25.03■■□□□ 1.6
ARHGAP28-213ENST00000583410 DNAJC5GQ8N7S2 189 aa25.03■■□□□ 1.6
ARHGAP28-213ENST00000583410 USP42Q9H9J4 1324 aaKnown RBP25.03■■□□□ 1.6
ARHGAP28-213ENST00000583410 C1orf141Q5JVX7 400 aa25.02■■□□□ 1.6
ARHGAP28-213ENST00000583410 INTS5Q6P9B9 1019 aaKnown RBP25.02■■□□□ 1.6
ARHGAP28-213ENST00000583410 AFDNP55196 1824 aaKnown RBP25.01■■□□□ 1.59
ARHGAP28-213ENST00000583410 MORC1Q86VD1 984 aa25.01■■□□□ 1.59
ARHGAP28-213ENST00000583410 PIM2Q9P1W9 311 aa25.01■■□□□ 1.59
ARHGAP28-213ENST00000583410 WDR90Q96KV7 1748 aa25■■□□□ 1.59
ARHGAP28-213ENST00000583410 EIF4G2P78344 907 aaKnown RBP eCLIP25■■□□□ 1.59
ARHGAP28-213ENST00000583410 CHRNA5P30532 468 aa24.99■■□□□ 1.59
ARHGAP28-213ENST00000583410 IL13P35225 146 aa24.99■■□□□ 1.59
ARHGAP28-213ENST00000583410 TM4SF1P30408 202 aa24.98■■□□□ 1.59
ARHGAP28-213ENST00000583410 DALRD3Q5D0E6 543 aaKnown RBP24.98■■□□□ 1.59
ARHGAP28-213ENST00000583410 POLRMTO00411 1230 aaKnown RBP24.97■■□□□ 1.59
ARHGAP28-213ENST00000583410 DNAJC10Q8IXB1 793 aa24.97■■□□□ 1.59
ARHGAP28-213ENST00000583410 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
ARHGAP28-213ENST00000583410 KCPQ6ZWJ8 1503 aa24.96■■□□□ 1.59
ARHGAP28-213ENST00000583410 LGR6Q9HBX8 967 aa24.96■■□□□ 1.59
ARHGAP28-213ENST00000583410 CLSPNQ9HAW4 1339 aa24.95■■□□□ 1.58
ARHGAP28-213ENST00000583410 HTRA3P83110 453 aa24.94■■□□□ 1.58
ARHGAP28-213ENST00000583410 RBM46Q8TBY0 533 aaKnown RBP24.94■■□□□ 1.58
ARHGAP28-213ENST00000583410 CCDC88AQ3V6T2 1871 aa24.94■■□□□ 1.58
ARHGAP28-213ENST00000583410 USPL1Q5W0Q7 1092 aa24.93■■□□□ 1.58
ARHGAP28-213ENST00000583410 RNF181Q9P0P0 153 aa24.93■■□□□ 1.58
ARHGAP28-213ENST00000583410 NRXN2Q9P2S2 1712 aa24.92■■□□□ 1.58
ARHGAP28-213ENST00000583410 SOS1Q07889 1333 aaPredicted RBP24.92■■□□□ 1.58
ARHGAP28-213ENST00000583410 SLC39A6Q13433 755 aa24.92■■□□□ 1.58
ARHGAP28-213ENST00000583410 AKAP4Q5JQC9 854 aa24.92■■□□□ 1.58
ARHGAP28-213ENST00000583410 SLC52A2Q9HAB3 445 aa24.92■■□□□ 1.58
ARHGAP28-213ENST00000583410 DLEC1Q9Y238 1755 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms