RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 PRAG1Q86YV5 1406 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 PDS5BQ9NTI5 1447 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 TSC1Q92574 1164 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 UBXN6Q9BZV1 441 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 TMX4Q9H1E5 349 aaPredicted RBP11.12□□□□□ -0.63
SKA2-207ENST00000583380 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 ATP10AO60312 1499 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 ABCC10Q5T3U5 1492 aa11.12□□□□□ -0.63
SKA2-207ENST00000583380 KLHL33A6NCF5 533 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 APAF1O14727 1248 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 CTAGE5O15320 804 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 PNMA6AP0CW24 399 aaPredicted RBP11.11□□□□□ -0.63
SKA2-207ENST00000583380 CORO7P57737 925 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 CUL4AQ13619 759 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 C11orf91Q3C1V1 193 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 GPATCH11Q8N954 259 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 DNAAF4Q8WXU2 420 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 ITFG2Q969R8 447 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 RUNDC1Q96C34 613 aa11.11□□□□□ -0.63
SKA2-207ENST00000583380 IL16Q14005 1332 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 H0YHG0 523 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 SMC2O95347 1197 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 CCDC158Q5M9N0 1113 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 FBXO38Q6PIJ6 1188 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 TBC1D9Q6ZT07 1266 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 SPATS2Q86XZ4 545 aaKnown RBP11.1□□□□□ -0.63
SKA2-207ENST00000583380 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.1□□□□□ -0.63
SKA2-207ENST00000583380 IL17RAQ96F46 866 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 CHIC2Q9UKJ5 165 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 FHOD1Q9Y613 1164 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 KIF24Q5T7B8 1368 aa11.1□□□□□ -0.63
SKA2-207ENST00000583380 PLA2R1Q13018 1463 aa11.09□□□□□ -0.63
SKA2-207ENST00000583380 ABCC11Q96J66 1382 aa11.09□□□□□ -0.63
SKA2-207ENST00000583380 ZRANB2O95218 330 aaKnown RBP eCLIP11.09□□□□□ -0.63
SKA2-207ENST00000583380 PKD2Q13563 968 aa11.09□□□□□ -0.63
SKA2-207ENST00000583380 TUBB2AQ13885 445 aa11.09□□□□□ -0.63
SKA2-207ENST00000583380 CCDC30Q5VVM6 783 aa11.09□□□□□ -0.63
SKA2-207ENST00000583380 NYAP1Q6ZVC0 841 aa11.09□□□□□ -0.63
SKA2-207ENST00000583380 OTUD6BQ8N6M0 293 aa11.09□□□□□ -0.63
SKA2-207ENST00000583380 UBXN4Q92575 508 aa11.09□□□□□ -0.63
SKA2-207ENST00000583380 TUBB2BQ9BVA1 445 aa11.09□□□□□ -0.63
SKA2-207ENST00000583380 SHANK2Q9UPX8 1470 aa11.08□□□□□ -0.64
SKA2-207ENST00000583380 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
SKA2-207ENST00000583380 EFCAB8A8MWE9 144 aa11.08□□□□□ -0.64
SKA2-207ENST00000583380 ALDH1L2Q3SY69 923 aa11.08□□□□□ -0.64
SKA2-207ENST00000583380 GIMAP7Q8NHV1 300 aa11.08□□□□□ -0.64
SKA2-207ENST00000583380 ZBTB40Q9NUA8 1239 aa11.08□□□□□ -0.64
SKA2-207ENST00000583380 RBM27Q9P2N5 1060 aaKnown RBP11.08□□□□□ -0.64
SKA2-207ENST00000583380 IMPACTQ9P2X3 320 aa11.08□□□□□ -0.64
SKA2-207ENST00000583380 CADPSQ9ULU8 1353 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 GOLGA6L9A6NEM1 432 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 IPO7O95373 1038 aaKnown RBP11.07□□□□□ -0.64
SKA2-207ENST00000583380 SETSIPP0DME0 302 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 DNAJC21Q5F1R6 531 aaKnown RBP11.07□□□□□ -0.64
SKA2-207ENST00000583380 SARM1Q6SZW1 724 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 ATF7IPQ6VMQ6 1270 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 ANKRD18AQ8IVF6 992 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 CCDC50Q8IVM0 306 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 DRC7Q8IY82 874 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 GPR161Q8N6U8 529 aaKnown RBP11.07□□□□□ -0.64
SKA2-207ENST00000583380 ARHGAP45Q92619 1136 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 ERCC4Q92889 916 aaPredicted RBP11.07□□□□□ -0.64
SKA2-207ENST00000583380 MRFAP1L1Q96HT8 127 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 DRC1Q96MC2 740 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 TESK2Q96S53 571 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 USP26Q9BXU7 913 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 GBP3Q9H0R5 595 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 ZNF446Q9NWS9 450 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 PYCARDQ9ULZ3 195 aa11.07□□□□□ -0.64
SKA2-207ENST00000583380 KIAA0586Q9BVV6 1533 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 SRPK2P78362 688 aaKnown RBP11.06□□□□□ -0.64
SKA2-207ENST00000583380 ICA1Q05084 483 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 NEDD9Q14511 834 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 SETDB1Q15047 1291 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 BRD3Q15059 726 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 ZSCAN25Q6NSZ9 544 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 C16orf45Q96MC5 204 aaPredicted RBP11.06□□□□□ -0.64
SKA2-207ENST00000583380 FUCA2Q9BTY2 467 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 TEX13AQ9BXU3 409 aaPredicted RBP11.06□□□□□ -0.64
SKA2-207ENST00000583380 KCNF1Q9H3M0 494 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 ARFGAP3Q9NP61 516 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 CLIP2Q9UDT6 1046 aa11.06□□□□□ -0.64
SKA2-207ENST00000583380 ZNF215Q9UL58 517 aaPredicted RBP11.06□□□□□ -0.64
SKA2-207ENST00000583380 ATXN2Q99700 1313 aaKnown RBP11.06□□□□□ -0.64
SKA2-207ENST00000583380 EIF3CLB5ME19 914 aaKnown RBP11.05□□□□□ -0.64
SKA2-207ENST00000583380 RDXP35241 583 aaKnown RBP11.05□□□□□ -0.64
SKA2-207ENST00000583380 SMC1AQ14683 1233 aaKnown RBP11.05□□□□□ -0.64
SKA2-207ENST00000583380 CRYMQ14894 314 aa11.05□□□□□ -0.64
SKA2-207ENST00000583380 SSH2Q76I76 1423 aa11.05□□□□□ -0.64
SKA2-207ENST00000583380 TADA2BQ86TJ2 420 aa11.05□□□□□ -0.64
SKA2-207ENST00000583380 TCP11Q8WWU5 503 aa11.05□□□□□ -0.64
SKA2-207ENST00000583380 EIF3CQ99613 913 aaKnown RBP11.05□□□□□ -0.64
SKA2-207ENST00000583380 SPAG9O60271 1321 aaKnown RBP11.05□□□□□ -0.64
SKA2-207ENST00000583380 PHLPP2Q6ZVD8 1323 aa11.05□□□□□ -0.64
SKA2-207ENST00000583380 ABCA10Q8WWZ4 1543 aa11.04□□□□□ -0.64
SKA2-207ENST00000583380 CCDC189A1A4V9 331 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms