RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 FLT4P35916 1363 aa24.31■■□□□ 1.48
SNX11-212ENST00000583320 KIF20BQ96Q89 1820 aa24.31■■□□□ 1.48
SNX11-212ENST00000583320 WDR90Q96KV7 1748 aa24.31■■□□□ 1.48
SNX11-212ENST00000583320 NMRK2Q9NPI5 230 aa24.31■■□□□ 1.48
SNX11-212ENST00000583320 NCAPD2Q15021 1401 aa24.3■■□□□ 1.48
SNX11-212ENST00000583320 GNPATO15228 680 aa24.3■■□□□ 1.48
SNX11-212ENST00000583320 TOMM70O94826 608 aa24.3■■□□□ 1.48
SNX11-212ENST00000583320 MMP10P09238 476 aa24.3■■□□□ 1.48
SNX11-212ENST00000583320 HMGB2P26583 209 aaKnown RBP24.3■■□□□ 1.48
SNX11-212ENST00000583320 C10orf71Q711Q0 1435 aa24.28■■□□□ 1.48
SNX11-212ENST00000583320 NKX1-1Q15270 411 aaPredicted RBP24.28■■□□□ 1.48
SNX11-212ENST00000583320 MIER1Q8N108 512 aa24.28■■□□□ 1.48
SNX11-212ENST00000583320 HTRA3P83110 453 aa24.27■■□□□ 1.48
SNX11-212ENST00000583320 ASAP1Q9ULH1 1129 aa24.27■■□□□ 1.48
SNX11-212ENST00000583320 BRCA1P38398 1863 aaKnown RBP24.26■■□□□ 1.47
SNX11-212ENST00000583320 A0A0G2JLW4 131 aa24.26■■□□□ 1.47
SNX11-212ENST00000583320 ANP32CO43423 234 aa24.26■■□□□ 1.47
SNX11-212ENST00000583320 BCS1LQ9Y276 419 aa24.26■■□□□ 1.47
SNX11-212ENST00000583320 EMILIN1Q9Y6C2 1016 aa24.25■■□□□ 1.47
SNX11-212ENST00000583320 KIF24Q5T7B8 1368 aa24.24■■□□□ 1.47
SNX11-212ENST00000583320 PCNTO95613 3336 aa24.23■■□□□ 1.47
SNX11-212ENST00000583320 C4AP0C0L4 1744 aa24.22■■□□□ 1.47
SNX11-212ENST00000583320 ANKRD26Q9UPS8 1709 aa24.22■■□□□ 1.47
SNX11-212ENST00000583320 KDRP35968 1356 aa24.22■■□□□ 1.47
SNX11-212ENST00000583320 ATP6V1AP38606 617 aa24.22■■□□□ 1.47
SNX11-212ENST00000583320 COL13A1Q5TAT6 717 aaPredicted RBP24.22■■□□□ 1.47
SNX11-212ENST00000583320 ARHGAP27Q6ZUM4 889 aa24.22■■□□□ 1.47
SNX11-212ENST00000583320 TMOD3Q9NYL9 352 aa24.22■■□□□ 1.47
SNX11-212ENST00000583320 DPEP1P16444 411 aa24.21■■□□□ 1.47
SNX11-212ENST00000583320 TGFB2P61812 414 aa24.2■■□□□ 1.46
SNX11-212ENST00000583320 PANK3Q9H999 370 aa24.2■■□□□ 1.46
SNX11-212ENST00000583320 ATG3Q9NT62 314 aa24.2■■□□□ 1.46
SNX11-212ENST00000583320 PER1O15534 1290 aaPredicted RBP24.19■■□□□ 1.46
SNX11-212ENST00000583320 SLC4A9Q96Q91 983 aa24.19■■□□□ 1.46
SNX11-212ENST00000583320 SPG7Q9UQ90 795 aa24.19■■□□□ 1.46
SNX11-212ENST00000583320 RBM46Q8TBY0 533 aaKnown RBP24.18■■□□□ 1.46
SNX11-212ENST00000583320 COL5A3P25940 1745 aaPredicted RBP24.18■■□□□ 1.46
SNX11-212ENST00000583320 ARFGEF1Q9Y6D6 1849 aa24.17■■□□□ 1.46
SNX11-212ENST00000583320 FCHSD2O94868 740 aa24.17■■□□□ 1.46
SNX11-212ENST00000583320 C9orf131Q5VYM1 1079 aa24.17■■□□□ 1.46
SNX11-212ENST00000583320 KLRG1Q96E93 195 aa24.17■■□□□ 1.46
SNX11-212ENST00000583320 KCPQ6ZWJ8 1503 aa24.16■■□□□ 1.46
SNX11-212ENST00000583320 PHKG2P15735 406 aa24.16■■□□□ 1.46
SNX11-212ENST00000583320 JMYQ8N9B5 988 aa24.16■■□□□ 1.46
SNX11-212ENST00000583320 KCNA3P22001 575 aa24.15■■□□□ 1.46
SNX11-212ENST00000583320 EYA1Q99502 592 aa24.15■■□□□ 1.46
SNX11-212ENST00000583320 CCER2I3L3R5 266 aa24.14■■□□□ 1.45
SNX11-212ENST00000583320 CAPN15O75808 1086 aa24.14■■□□□ 1.45
SNX11-212ENST00000583320 GYS1P13807 737 aa24.14■■□□□ 1.45
SNX11-212ENST00000583320 TRAPPC3LQ5T215 181 aa24.14■■□□□ 1.45
SNX11-212ENST00000583320 NLGN1Q8N2Q7 840 aa24.14■■□□□ 1.45
SNX11-212ENST00000583320 ARHGEF1Q92888 912 aaKnown RBP24.14■■□□□ 1.45
SNX11-212ENST00000583320 CARD14Q9BXL6 1004 aa24.14■■□□□ 1.45
SNX11-212ENST00000583320 RTCBQ9Y3I0 505 aaKnown RBP24.14■■□□□ 1.45
SNX11-212ENST00000583320 ZNF831Q5JPB2 1677 aa24.14■■□□□ 1.45
SNX11-212ENST00000583320 PPM1GO15355 546 aaPredicted RBP24.13■■□□□ 1.45
SNX11-212ENST00000583320 PRKRIP1Q9H875 184 aaPredicted RBP24.13■■□□□ 1.45
SNX11-212ENST00000583320 CCDC87Q9NVE4 849 aa24.13■■□□□ 1.45
SNX11-212ENST00000583320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.12■■□□□ 1.45
SNX11-212ENST00000583320 MYH14Q7Z406 1995 aaKnown RBP24.12■■□□□ 1.45
SNX11-212ENST00000583320 PLEKHG2Q9H7P9 1386 aa24.12■■□□□ 1.45
SNX11-212ENST00000583320 NPC1L1Q9UHC9 1359 aa24.12■■□□□ 1.45
SNX11-212ENST00000583320 IFNL2Q8IZJ0 200 aa24.11■■□□□ 1.45
SNX11-212ENST00000583320 FSTL1Q12841 308 aa24.09■■□□□ 1.45
SNX11-212ENST00000583320 C16orf71Q8IYS4 520 aaPredicted RBP24.09■■□□□ 1.45
SNX11-212ENST00000583320 KNSTRNQ9Y448 316 aa24.09■■□□□ 1.45
SNX11-212ENST00000583320 CNTNAP4Q9C0A0 1308 aa24.09■■□□□ 1.45
SNX11-212ENST00000583320 TNRC6CQ9HCJ0 1690 aaKnown RBP24.08■■□□□ 1.45
SNX11-212ENST00000583320 DCAF5Q96JK2 942 aa24.08■■□□□ 1.45
SNX11-212ENST00000583320 RBM42Q9BTD8 480 aaKnown RBP24.08■■□□□ 1.45
SNX11-212ENST00000583320 PARP3Q9Y6F1 533 aa24.08■■□□□ 1.45
SNX11-212ENST00000583320 ADRA2BP18089 450 aa24.07■■□□□ 1.44
SNX11-212ENST00000583320 RALBP1Q15311 655 aa24.07■■□□□ 1.44
SNX11-212ENST00000583320 RNF181Q9P0P0 153 aa24.07■■□□□ 1.44
SNX11-212ENST00000583320 SBF1O95248 1867 aa24.07■■□□□ 1.44
SNX11-212ENST00000583320 RPS6KA4O75676 772 aa24.06■■□□□ 1.44
SNX11-212ENST00000583320 RC3H1Q5TC82 1133 aaKnown RBP24.06■■□□□ 1.44
SNX11-212ENST00000583320 RRAGCQ9HB90 399 aa24.06■■□□□ 1.44
SNX11-212ENST00000583320 RFC4P35249 363 aa24.05■■□□□ 1.44
SNX11-212ENST00000583320 DDR1Q08345 913 aa24.05■■□□□ 1.44
SNX11-212ENST00000583320 SRP68Q9UHB9 627 aaKnown RBP24.05■■□□□ 1.44
SNX11-212ENST00000583320 KDM6AO15550 1401 aaPredicted RBP24.04■■□□□ 1.44
SNX11-212ENST00000583320 AMER1Q5JTC6 1135 aaPredicted RBP24.04■■□□□ 1.44
SNX11-212ENST00000583320 TNS4Q8IZW8 715 aa24.04■■□□□ 1.44
SNX11-212ENST00000583320 PIM2Q9P1W9 311 aa24.04■■□□□ 1.44
SNX11-212ENST00000583320 KDM2BQ8NHM5 1336 aa24.04■■□□□ 1.44
SNX11-212ENST00000583320 CHRNA5P30532 468 aa24.03■■□□□ 1.44
SNX11-212ENST00000583320 FKBP8Q14318 412 aa24.02■■□□□ 1.44
SNX11-212ENST00000583320 DALRD3Q5D0E6 543 aaKnown RBP24.02■■□□□ 1.44
SNX11-212ENST00000583320 POLKQ9UBT6 870 aa24.02■■□□□ 1.44
SNX11-212ENST00000583320 ADAMTS7Q9UKP4 1686 aa24.02■■□□□ 1.44
SNX11-212ENST00000583320 TJP1Q07157 1748 aa24.01■■□□□ 1.43
SNX11-212ENST00000583320 EIF4A2Q14240 407 aaKnown RBP24.01■■□□□ 1.43
SNX11-212ENST00000583320 ERVV-2B6SEH9 535 aa24■■□□□ 1.43
SNX11-212ENST00000583320 PRELPP51888 382 aa24■■□□□ 1.43
SNX11-212ENST00000583320 USP42Q9H9J4 1324 aaKnown RBP23.99■■□□□ 1.43
SNX11-212ENST00000583320 RASSF7Q02833 373 aa23.98■■□□□ 1.43
SNX11-212ENST00000583320 CRKLP46109 303 aaKnown RBP23.97■■□□□ 1.43
SNX11-212ENST00000583320 SMC1BQ8NDV3 1235 aa23.97■■□□□ 1.43
SNX11-212ENST00000583320 MYBBP1AQ9BQG0 1328 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms