RNA–Protein interactions for RNA: ENST00000582877.1

CACNB1-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-211ENST00000582877 ATG3Q9NT62 314 aa13.49□□□□□ -0.25
CACNB1-211ENST00000582877 CICQ96RK0 1608 aaPredicted RBP13.49□□□□□ -0.25
CACNB1-211ENST00000582877 MRC1P22897 1456 aa13.48□□□□□ -0.25
CACNB1-211ENST00000582877 C4AP0C0L4 1744 aa13.48□□□□□ -0.25
CACNB1-211ENST00000582877 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
CACNB1-211ENST00000582877 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
CACNB1-211ENST00000582877 ITPK1Q13572 414 aa13.48□□□□□ -0.25
CACNB1-211ENST00000582877 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
CACNB1-211ENST00000582877 AMIGO3Q86WK7 504 aa13.48□□□□□ -0.25
CACNB1-211ENST00000582877 AK7Q96M32 723 aa13.48□□□□□ -0.25
CACNB1-211ENST00000582877 PHF14O94880 888 aa13.47□□□□□ -0.25
CACNB1-211ENST00000582877 POLD1P28340 1107 aa13.47□□□□□ -0.25
CACNB1-211ENST00000582877 SMIM5Q71RC9 77 aa13.47□□□□□ -0.25
CACNB1-211ENST00000582877 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
CACNB1-211ENST00000582877 SYT17Q9BSW7 474 aa13.47□□□□□ -0.25
CACNB1-211ENST00000582877 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
CACNB1-211ENST00000582877 MYH14Q7Z406 1995 aaKnown RBP13.46□□□□□ -0.25
CACNB1-211ENST00000582877 ATP6V1AP38606 617 aa13.46□□□□□ -0.25
CACNB1-211ENST00000582877 CABP4P57796 275 aa13.46□□□□□ -0.25
CACNB1-211ENST00000582877 SLC4A9Q96Q91 983 aa13.45□□□□□ -0.26
CACNB1-211ENST00000582877 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
CACNB1-211ENST00000582877 SIPA1L3O60292 1781 aaPredicted RBP13.45□□□□□ -0.26
CACNB1-211ENST00000582877 UBR2Q8IWV8 1755 aa13.45□□□□□ -0.26
CACNB1-211ENST00000582877 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
CACNB1-211ENST00000582877 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
CACNB1-211ENST00000582877 CHD4Q14839 1912 aa13.43□□□□□ -0.26
CACNB1-211ENST00000582877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.43□□□□□ -0.26
CACNB1-211ENST00000582877 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
CACNB1-211ENST00000582877 GNPATO15228 680 aa13.43□□□□□ -0.26
CACNB1-211ENST00000582877 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
CACNB1-211ENST00000582877 MTHFSDQ2M296 383 aaKnown RBP13.43□□□□□ -0.26
CACNB1-211ENST00000582877 FLAD1Q8NFF5 587 aa13.43□□□□□ -0.26
CACNB1-211ENST00000582877 SSFA2P28290 1259 aa13.42□□□□□ -0.26
CACNB1-211ENST00000582877 PPP2R1AP30153 589 aa13.42□□□□□ -0.26
CACNB1-211ENST00000582877 NFATC2IPQ8NCF5 419 aa13.42□□□□□ -0.26
CACNB1-211ENST00000582877 LGR6Q9HBX8 967 aa13.42□□□□□ -0.26
CACNB1-211ENST00000582877 KCPQ6ZWJ8 1503 aa13.42□□□□□ -0.26
CACNB1-211ENST00000582877 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
CACNB1-211ENST00000582877 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
CACNB1-211ENST00000582877 RNMTO43148 476 aaKnown RBP13.4□□□□□ -0.26
CACNB1-211ENST00000582877 CFAP53Q96M91 514 aa13.4□□□□□ -0.26
CACNB1-211ENST00000582877 SLC52A2Q9HAB3 445 aa13.4□□□□□ -0.26
CACNB1-211ENST00000582877 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
CACNB1-211ENST00000582877 YY1P25490 414 aa13.39□□□□□ -0.27
CACNB1-211ENST00000582877 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
CACNB1-211ENST00000582877 SLC39A6Q13433 755 aa13.38□□□□□ -0.27
CACNB1-211ENST00000582877 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
CACNB1-211ENST00000582877 KIAA1551Q9HCM1 1747 aa13.38□□□□□ -0.27
CACNB1-211ENST00000582877 PRKAR2BP31323 418 aa13.37□□□□□ -0.27
CACNB1-211ENST00000582877 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
CACNB1-211ENST00000582877 RTCBQ9Y3I0 505 aaKnown RBP13.37□□□□□ -0.27
CACNB1-211ENST00000582877 CRKLP46109 303 aaKnown RBP13.36□□□□□ -0.27
CACNB1-211ENST00000582877 RC3H1Q5TC82 1133 aaKnown RBP13.36□□□□□ -0.27
CACNB1-211ENST00000582877 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
CACNB1-211ENST00000582877 GAS2L2Q8NHY3 880 aa13.36□□□□□ -0.27
CACNB1-211ENST00000582877 N4BP2Q86UW6 1770 aaPredicted RBP13.35□□□□□ -0.27
CACNB1-211ENST00000582877 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
CACNB1-211ENST00000582877 GPR162Q16538 588 aa13.35□□□□□ -0.27
CACNB1-211ENST00000582877 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
CACNB1-211ENST00000582877 DNAJC10Q8IXB1 793 aa13.35□□□□□ -0.27
CACNB1-211ENST00000582877 PHACTR3Q96KR7 559 aa13.35□□□□□ -0.27
CACNB1-211ENST00000582877 NUDCQ9Y266 331 aa13.35□□□□□ -0.27
CACNB1-211ENST00000582877 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
CACNB1-211ENST00000582877 U2AF1L5P0DN76 240 aaPredicted RBP13.34□□□□□ -0.27
CACNB1-211ENST00000582877 ADRA2BP18089 450 aa13.34□□□□□ -0.27
CACNB1-211ENST00000582877 U2AF1Q01081 240 aaKnown RBP eCLIP13.34□□□□□ -0.27
CACNB1-211ENST00000582877 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
CACNB1-211ENST00000582877 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
CACNB1-211ENST00000582877 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
CACNB1-211ENST00000582877 SCN7AQ01118 1682 aa13.32□□□□□ -0.28
CACNB1-211ENST00000582877 MMP10P09238 476 aa13.32□□□□□ -0.28
CACNB1-211ENST00000582877 YBX3P16989 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
CACNB1-211ENST00000582877 RFC4P35249 363 aa13.32□□□□□ -0.28
CACNB1-211ENST00000582877 TEFQ10587 303 aa13.32□□□□□ -0.28
CACNB1-211ENST00000582877 SRP68Q9UHB9 627 aaKnown RBP13.32□□□□□ -0.28
CACNB1-211ENST00000582877 CD2APQ9Y5K6 639 aa13.32□□□□□ -0.28
CACNB1-211ENST00000582877 BRCA1P38398 1863 aaKnown RBP13.31□□□□□ -0.28
CACNB1-211ENST00000582877 C10orf71Q711Q0 1435 aa13.31□□□□□ -0.28
CACNB1-211ENST00000582877 GYS1P13807 737 aa13.31□□□□□ -0.28
CACNB1-211ENST00000582877 INTS5Q6P9B9 1019 aaKnown RBP13.31□□□□□ -0.28
CACNB1-211ENST00000582877 TTC5Q8N0Z6 440 aa13.31□□□□□ -0.28
CACNB1-211ENST00000582877 CCDC87Q9NVE4 849 aa13.31□□□□□ -0.28
CACNB1-211ENST00000582877 AFDNP55196 1824 aaKnown RBP13.31□□□□□ -0.28
CACNB1-211ENST00000582877 USP42Q9H9J4 1324 aaKnown RBP13.31□□□□□ -0.28
CACNB1-211ENST00000582877 PXDNLA1KZ92 1463 aa13.3□□□□□ -0.28
CACNB1-211ENST00000582877 UTRNP46939 3433 aa13.3□□□□□ -0.28
CACNB1-211ENST00000582877 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
CACNB1-211ENST00000582877 WWC3Q9ULE0 1092 aa13.3□□□□□ -0.28
CACNB1-211ENST00000582877 ZBTB1Q9Y2K1 713 aa13.3□□□□□ -0.28
CACNB1-211ENST00000582877 SOS1Q07889 1333 aaPredicted RBP13.3□□□□□ -0.28
CACNB1-211ENST00000582877 COL15A1P39059 1388 aa13.3□□□□□ -0.28
CACNB1-211ENST00000582877 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
CACNB1-211ENST00000582877 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
CACNB1-211ENST00000582877 FCHSD2O94868 740 aa13.29□□□□□ -0.28
CACNB1-211ENST00000582877 DDX10Q13206 875 aaKnown RBP13.29□□□□□ -0.28
CACNB1-211ENST00000582877 NLGN1Q8N2Q7 840 aa13.29□□□□□ -0.28
CACNB1-211ENST00000582877 BCORQ6W2J9 1755 aa13.29□□□□□ -0.28
CACNB1-211ENST00000582877 HEG1Q9ULI3 1381 aa13.29□□□□□ -0.28
CACNB1-211ENST00000582877 ZNF790Q6PG37 636 aa13.28□□□□□ -0.28
CACNB1-211ENST00000582877 MCM10Q7L590 875 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms