RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 JMYQ8N9B5 988 aa21.3■■□□□ 1
IFT20-212ENST00000582797 FLT4P35916 1363 aa21.29■■□□□ 1
IFT20-212ENST00000582797 TGFB2P61812 414 aa21.29■■□□□ 1
IFT20-212ENST00000582797 TESK2Q96S53 571 aa21.29■■□□□ 1
IFT20-212ENST00000582797 ASAP1Q9ULH1 1129 aa21.29■■□□□ 1
IFT20-212ENST00000582797 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
IFT20-212ENST00000582797 KCPQ6ZWJ8 1503 aa21.29■■□□□ 1
IFT20-212ENST00000582797 TNRC6CQ9HCJ0 1690 aaKnown RBP21.28■■□□□ 1
IFT20-212ENST00000582797 DPEP1P16444 411 aa21.28■■□□□ 1
IFT20-212ENST00000582797 ATP6V1AP38606 617 aa21.28■■□□□ 1
IFT20-212ENST00000582797 SBF1O95248 1867 aa21.28■■□□□ 1
IFT20-212ENST00000582797 FCHSD2O94868 740 aa21.27■■□□□ 1
IFT20-212ENST00000582797 NKX1-1Q15270 411 aaPredicted RBP21.27■■□□□ 1
IFT20-212ENST00000582797 C9orf131Q5VYM1 1079 aa21.27■■□□□ 1
IFT20-212ENST00000582797 C16orf71Q8IYS4 520 aaPredicted RBP21.27■■□□□ 1
IFT20-212ENST00000582797 TNS4Q8IZW8 715 aa21.27■■□□□ 1
IFT20-212ENST00000582797 TMOD3Q9NYL9 352 aa21.26■□□□□ 0.99
IFT20-212ENST00000582797 NCAPD2Q15021 1401 aa21.26■□□□□ 0.99
IFT20-212ENST00000582797 PLEKHG2Q9H7P9 1386 aa21.25■□□□□ 0.99
IFT20-212ENST00000582797 ANKRD26Q9UPS8 1709 aa21.25■□□□□ 0.99
IFT20-212ENST00000582797 ST20-MTHFSA0A0A6YYL1 179 aa21.24■□□□□ 0.99
IFT20-212ENST00000582797 FSTL1Q12841 308 aa21.24■□□□□ 0.99
IFT20-212ENST00000582797 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
IFT20-212ENST00000582797 MYH14Q7Z406 1995 aaKnown RBP21.23■□□□□ 0.99
IFT20-212ENST00000582797 TMF1P82094 1093 aa21.23■□□□□ 0.99
IFT20-212ENST00000582797 CCDC87Q9NVE4 849 aa21.23■□□□□ 0.99
IFT20-212ENST00000582797 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
IFT20-212ENST00000582797 KCNA3P22001 575 aa21.22■□□□□ 0.99
IFT20-212ENST00000582797 PRELPP51888 382 aa21.22■□□□□ 0.99
IFT20-212ENST00000582797 NLGN1Q8N2Q7 840 aa21.22■□□□□ 0.99
IFT20-212ENST00000582797 ATG3Q9NT62 314 aa21.22■□□□□ 0.99
IFT20-212ENST00000582797 SPG7Q9UQ90 795 aa21.22■□□□□ 0.99
IFT20-212ENST00000582797 EMILIN1Q9Y6C2 1016 aa21.22■□□□□ 0.99
IFT20-212ENST00000582797 KDRP35968 1356 aa21.22■□□□□ 0.99
IFT20-212ENST00000582797 TRAPPC3LQ5T215 181 aa21.21■□□□□ 0.99
IFT20-212ENST00000582797 RTCBQ9Y3I0 505 aaKnown RBP21.21■□□□□ 0.99
IFT20-212ENST00000582797 SLC4A9Q96Q91 983 aa21.2■□□□□ 0.98
IFT20-212ENST00000582797 RRAGCQ9HB90 399 aa21.2■□□□□ 0.98
IFT20-212ENST00000582797 GYS1P13807 737 aa21.19■□□□□ 0.98
IFT20-212ENST00000582797 ARHGEF1Q92888 912 aaKnown RBP21.19■□□□□ 0.98
IFT20-212ENST00000582797 KDM2BQ8NHM5 1336 aa21.19■□□□□ 0.98
IFT20-212ENST00000582797 RNF181Q9P0P0 153 aa21.18■□□□□ 0.98
IFT20-212ENST00000582797 PHKG2P15735 406 aa21.17■□□□□ 0.98
IFT20-212ENST00000582797 PARP3Q9Y6F1 533 aa21.17■□□□□ 0.98
IFT20-212ENST00000582797 DCAF5Q96JK2 942 aa21.16■□□□□ 0.98
IFT20-212ENST00000582797 PIM2Q9P1W9 311 aa21.16■□□□□ 0.98
IFT20-212ENST00000582797 TONSLQ96HA7 1378 aa21.15■□□□□ 0.98
IFT20-212ENST00000582797 PPM1GO15355 546 aaPredicted RBP21.15■□□□□ 0.98
IFT20-212ENST00000582797 IFNL2Q8IZJ0 200 aa21.15■□□□□ 0.98
IFT20-212ENST00000582797 CCDC88AQ3V6T2 1871 aa21.15■□□□□ 0.98
IFT20-212ENST00000582797 RFC4P35249 363 aa21.14■□□□□ 0.97
IFT20-212ENST00000582797 DALRD3Q5D0E6 543 aaKnown RBP21.14■□□□□ 0.97
IFT20-212ENST00000582797 EYA1Q99502 592 aa21.14■□□□□ 0.97
IFT20-212ENST00000582797 RBM42Q9BTD8 480 aaKnown RBP21.14■□□□□ 0.97
IFT20-212ENST00000582797 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.14■□□□□ 0.97
IFT20-212ENST00000582797 TIAM2Q8IVF5 1701 aa21.14■□□□□ 0.97
IFT20-212ENST00000582797 ADRA2BP18089 450 aa21.13■□□□□ 0.97
IFT20-212ENST00000582797 SMC1BQ8NDV3 1235 aa21.13■□□□□ 0.97
IFT20-212ENST00000582797 CNTNAP4Q9C0A0 1308 aa21.12■□□□□ 0.97
IFT20-212ENST00000582797 HSPA1AP0DMV8 641 aaKnown RBP21.12■□□□□ 0.97
IFT20-212ENST00000582797 HSPA1BP0DMV9 641 aaKnown RBP21.12■□□□□ 0.97
IFT20-212ENST00000582797 RC3H1Q5TC82 1133 aaKnown RBP21.12■□□□□ 0.97
IFT20-212ENST00000582797 RPS6KA4O75676 772 aa21.11■□□□□ 0.97
IFT20-212ENST00000582797 CHRNA5P30532 468 aa21.11■□□□□ 0.97
IFT20-212ENST00000582797 TJP1Q07157 1748 aa21.11■□□□□ 0.97
IFT20-212ENST00000582797 DDR1Q08345 913 aa21.1■□□□□ 0.97
IFT20-212ENST00000582797 SRP68Q9UHB9 627 aaKnown RBP21.1■□□□□ 0.97
IFT20-212ENST00000582797 ADAMTS7Q9UKP4 1686 aa21.09■□□□□ 0.97
IFT20-212ENST00000582797 AFDNP55196 1824 aaKnown RBP21.09■□□□□ 0.97
IFT20-212ENST00000582797 CARD14Q9BXL6 1004 aa21.09■□□□□ 0.97
IFT20-212ENST00000582797 DLEC1Q9Y238 1755 aa21.09■□□□□ 0.97
IFT20-212ENST00000582797 WASHC2AQ641Q2 1341 aa21.08■□□□□ 0.97
IFT20-212ENST00000582797 RASSF7Q02833 373 aa21.08■□□□□ 0.97
IFT20-212ENST00000582797 FKBP8Q14318 412 aa21.08■□□□□ 0.97
IFT20-212ENST00000582797 SLC24A1O60721 1099 aa21.07■□□□□ 0.96
IFT20-212ENST00000582797 KDM6AO15550 1401 aaPredicted RBP21.06■□□□□ 0.96
IFT20-212ENST00000582797 USP42Q9H9J4 1324 aaKnown RBP21.05■□□□□ 0.96
IFT20-212ENST00000582797 ERVV-2B6SEH9 535 aa21.05■□□□□ 0.96
IFT20-212ENST00000582797 PTCD1O75127 700 aaKnown RBP21.02■□□□□ 0.96
IFT20-212ENST00000582797 CRKLP46109 303 aaKnown RBP21.02■□□□□ 0.96
IFT20-212ENST00000582797 NRXN2Q9P2S2 1712 aa21.01■□□□□ 0.95
IFT20-212ENST00000582797 POLRMTO00411 1230 aaKnown RBP21.01■□□□□ 0.95
IFT20-212ENST00000582797 VEGFAP15692 232 aaPredicted RBP21.01■□□□□ 0.95
IFT20-212ENST00000582797 EIF4A2Q14240 407 aaKnown RBP21.01■□□□□ 0.95
IFT20-212ENST00000582797 POLKQ9UBT6 870 aa21.01■□□□□ 0.95
IFT20-212ENST00000582797 ZC3H4Q9UPT8 1303 aaKnown RBP21.01■□□□□ 0.95
IFT20-212ENST00000582797 GLTPD2A6NH11 291 aa21■□□□□ 0.95
IFT20-212ENST00000582797 CABP4P57796 275 aa21■□□□□ 0.95
IFT20-212ENST00000582797 LMNB1P20700 586 aa20.99■□□□□ 0.95
IFT20-212ENST00000582797 DICER1Q9UPY3 1922 aaKnown RBP20.99■□□□□ 0.95
IFT20-212ENST00000582797 TM4SF1P30408 202 aa20.98■□□□□ 0.95
IFT20-212ENST00000582797 SCN11AQ9UI33 1791 aa20.97■□□□□ 0.95
IFT20-212ENST00000582797 HSP90AB1P08238 724 aaKnown RBP20.96■□□□□ 0.95
IFT20-212ENST00000582797 ZNF530Q6P9A1 599 aaPredicted RBP20.96■□□□□ 0.95
IFT20-212ENST00000582797 VIRMAQ69YN4 1812 aaKnown RBP20.96■□□□□ 0.95
IFT20-212ENST00000582797 POTECB2RU33 542 aa20.95■□□□□ 0.94
IFT20-212ENST00000582797 TNNT2P45379 298 aaPredicted RBP20.95■□□□□ 0.94
IFT20-212ENST00000582797 INTS5Q6P9B9 1019 aaKnown RBP20.95■□□□□ 0.94
IFT20-212ENST00000582797 PLEKHO1Q53GL0 409 aaPredicted RBP20.94■□□□□ 0.94
IFT20-212ENST00000582797 CDCA8Q53HL2 280 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms