RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 RBM25P49756 843 aaKnown RBP16.92■□□□□ 0.3
SRSF1-205ENST00000582730 ANTXR1Q9H6X2 564 aa16.92■□□□□ 0.3
SRSF1-205ENST00000582730 ADAMTSL3P82987 1691 aa16.92■□□□□ 0.3
SRSF1-205ENST00000582730 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
SRSF1-205ENST00000582730 PHAXQ9H814 394 aaKnown RBP16.92■□□□□ 0.3
SRSF1-205ENST00000582730 NFAT5O94916 1531 aa16.91■□□□□ 0.3
SRSF1-205ENST00000582730 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
SRSF1-205ENST00000582730 ZC3H6P61129 1189 aaKnown RBP16.9■□□□□ 0.3
SRSF1-205ENST00000582730 PLEKHO1Q53GL0 409 aaPredicted RBP16.9■□□□□ 0.3
SRSF1-205ENST00000582730 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
SRSF1-205ENST00000582730 RRAGDQ9NQL2 400 aaPredicted RBP16.9■□□□□ 0.3
SRSF1-205ENST00000582730 KCNQ3O43525 872 aa16.9■□□□□ 0.3
SRSF1-205ENST00000582730 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
SRSF1-205ENST00000582730 GNAI3P08754 354 aa16.9■□□□□ 0.3
SRSF1-205ENST00000582730 HSP90AA1P07900 732 aaKnown RBP16.89■□□□□ 0.29
SRSF1-205ENST00000582730 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
SRSF1-205ENST00000582730 ANXA1P04083 346 aa16.89■□□□□ 0.29
SRSF1-205ENST00000582730 ARHGEF25Q86VW2 580 aa16.89■□□□□ 0.29
SRSF1-205ENST00000582730 LRRFIP2Q9Y608 721 aaKnown RBP16.89■□□□□ 0.29
SRSF1-205ENST00000582730 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
SRSF1-205ENST00000582730 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
SRSF1-205ENST00000582730 DDX17Q92841 729 aaKnown RBP16.88■□□□□ 0.29
SRSF1-205ENST00000582730 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
SRSF1-205ENST00000582730 SDSP20132 328 aa16.87■□□□□ 0.29
SRSF1-205ENST00000582730 TSHZ3Q63HK5 1081 aa16.87■□□□□ 0.29
SRSF1-205ENST00000582730 BABAM1Q9NWV8 329 aa16.87■□□□□ 0.29
SRSF1-205ENST00000582730 PNMA6EA0A0J9YXQ4 647 aa16.87■□□□□ 0.29
SRSF1-205ENST00000582730 AKAP4Q5JQC9 854 aa16.87■□□□□ 0.29
SRSF1-205ENST00000582730 RBM42Q9BTD8 480 aaKnown RBP16.87■□□□□ 0.29
SRSF1-205ENST00000582730 CHPF2Q9P2E5 772 aa16.87■□□□□ 0.29
SRSF1-205ENST00000582730 UBTFL1P0CB47 393 aaPredicted RBP16.87■□□□□ 0.29
SRSF1-205ENST00000582730 EIF4A1P60842 406 aaKnown RBP16.87■□□□□ 0.29
SRSF1-205ENST00000582730 CASC1Q6TDU7 716 aa16.87■□□□□ 0.29
SRSF1-205ENST00000582730 AXIN2Q9Y2T1 843 aa16.87■□□□□ 0.29
SRSF1-205ENST00000582730 ATF3P18847 181 aa16.86■□□□□ 0.29
SRSF1-205ENST00000582730 C19orf44Q9H6X5 657 aa16.86■□□□□ 0.29
SRSF1-205ENST00000582730 RGPD2P0DJD1 1756 aa16.85■□□□□ 0.29
SRSF1-205ENST00000582730 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
SRSF1-205ENST00000582730 CEMIPQ8WUJ3 1361 aa16.85■□□□□ 0.29
SRSF1-205ENST00000582730 CHMP5Q9NZZ3 219 aa16.85■□□□□ 0.29
SRSF1-205ENST00000582730 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
SRSF1-205ENST00000582730 SOS1Q07889 1333 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-205ENST00000582730 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
SRSF1-205ENST00000582730 KIF2CQ99661 725 aa16.84■□□□□ 0.29
SRSF1-205ENST00000582730 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
SRSF1-205ENST00000582730 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.29
SRSF1-205ENST00000582730 USP44Q9H0E7 712 aa16.83■□□□□ 0.29
SRSF1-205ENST00000582730 RNMTO43148 476 aaKnown RBP16.83■□□□□ 0.28
SRSF1-205ENST00000582730 CD2BP2O95400 341 aaKnown RBP16.83■□□□□ 0.28
SRSF1-205ENST00000582730 NLRP2Q9NX02 1062 aa16.83■□□□□ 0.28
SRSF1-205ENST00000582730 C1orf167Q5SNV9 1468 aa16.83■□□□□ 0.28
SRSF1-205ENST00000582730 PI4KAP2A4QPH2 592 aa16.83■□□□□ 0.28
SRSF1-205ENST00000582730 PDE1AP54750 535 aa16.83■□□□□ 0.28
SRSF1-205ENST00000582730 PI4KAP1Q8N8J0 262 aa16.83■□□□□ 0.28
SRSF1-205ENST00000582730 ARXQ96QS3 562 aa16.83■□□□□ 0.28
SRSF1-205ENST00000582730 PXDNQ92626 1479 aa16.82■□□□□ 0.28
SRSF1-205ENST00000582730 ATP8B2P98198 1209 aa16.82■□□□□ 0.28
SRSF1-205ENST00000582730 SNX21Q969T3 373 aa16.82■□□□□ 0.28
SRSF1-205ENST00000582730 CSB-PGBD3P0DP91 1061 aa16.82■□□□□ 0.28
SRSF1-205ENST00000582730 CABLES1Q8TDN4 633 aa16.81■□□□□ 0.28
SRSF1-205ENST00000582730 IL1RAPL2Q9NP60 686 aa16.81■□□□□ 0.28
SRSF1-205ENST00000582730 TRIM6-TRIM34B2RNG4 842 aa16.81■□□□□ 0.28
SRSF1-205ENST00000582730 DNAAF4Q8WXU2 420 aa16.8■□□□□ 0.28
SRSF1-205ENST00000582730 TMEM94Q12767 1356 aa16.8■□□□□ 0.28
SRSF1-205ENST00000582730 RAPGEF4Q8WZA2 1011 aa16.8■□□□□ 0.28
SRSF1-205ENST00000582730 RILPL2Q969X0 211 aa16.8■□□□□ 0.28
SRSF1-205ENST00000582730 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
SRSF1-205ENST00000582730 K7ELQ4 463 aaPredicted RBP16.79■□□□□ 0.28
SRSF1-205ENST00000582730 SURF6O75683 361 aaKnown RBP16.79■□□□□ 0.28
SRSF1-205ENST00000582730 MX1P20591 662 aa16.79■□□□□ 0.28
SRSF1-205ENST00000582730 NBPF7P0C2Y1 421 aaPredicted RBP16.79■□□□□ 0.28
SRSF1-205ENST00000582730 XRCC6P12956 609 aaKnown RBP eCLIP16.79■□□□□ 0.28
SRSF1-205ENST00000582730 PPP1R42Q7Z4L9 355 aa16.79■□□□□ 0.28
SRSF1-205ENST00000582730 SRGAP3O43295 1099 aa16.78■□□□□ 0.28
SRSF1-205ENST00000582730 HOXB7P09629 217 aa16.78■□□□□ 0.28
SRSF1-205ENST00000582730 HSPA2P54652 639 aa16.78■□□□□ 0.28
SRSF1-205ENST00000582730 ERBB3P21860 1342 aa16.78■□□□□ 0.28
SRSF1-205ENST00000582730 CHRNA2Q15822 529 aa16.78■□□□□ 0.28
SRSF1-205ENST00000582730 USP26Q9BXU7 913 aa16.78■□□□□ 0.28
SRSF1-205ENST00000582730 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
SRSF1-205ENST00000582730 SLIT3O75094 1523 aa16.78■□□□□ 0.28
SRSF1-205ENST00000582730 MCM4P33991 863 aa16.77■□□□□ 0.28
SRSF1-205ENST00000582730 DBF4Q9UBU7 674 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-205ENST00000582730 REC8O95072 547 aa16.77■□□□□ 0.27
SRSF1-205ENST00000582730 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.27
SRSF1-205ENST00000582730 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
SRSF1-205ENST00000582730 PROSER3Q2NL68 480 aa16.76■□□□□ 0.27
SRSF1-205ENST00000582730 NUTM1Q86Y26 1132 aa16.76■□□□□ 0.27
SRSF1-205ENST00000582730 GZF1Q9H116 711 aaPredicted RBP16.76■□□□□ 0.27
SRSF1-205ENST00000582730 ERC2O15083 957 aa16.76■□□□□ 0.27
SRSF1-205ENST00000582730 GOLGA6L3A6NEY3 463 aa16.76■□□□□ 0.27
SRSF1-205ENST00000582730 SLC39A6Q13433 755 aa16.76■□□□□ 0.27
SRSF1-205ENST00000582730 RABEP1Q15276 862 aa16.76■□□□□ 0.27
SRSF1-205ENST00000582730 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
SRSF1-205ENST00000582730 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
SRSF1-205ENST00000582730 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
SRSF1-205ENST00000582730 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
SRSF1-205ENST00000582730 BEND3Q5T5X7 828 aa16.75■□□□□ 0.27
SRSF1-205ENST00000582730 CACNA1FO60840 1977 aa16.75■□□□□ 0.27
SRSF1-205ENST00000582730 OSBPL3Q9H4L5 887 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms