RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 ANKRD44Q8N8A2 993 aa12.46□□□□□ -0.42
TRAPPC8-211ENST00000582539 MED1Q15648 1581 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC8-211ENST00000582539 FAM208AQ9UK61 1670 aaKnown RBP12.45□□□□□ -0.42
TRAPPC8-211ENST00000582539 SLIT3O75094 1523 aa12.45□□□□□ -0.42
TRAPPC8-211ENST00000582539 ST18O60284 1047 aa12.44□□□□□ -0.42
TRAPPC8-211ENST00000582539 PHACTR3Q96KR7 559 aa12.44□□□□□ -0.42
TRAPPC8-211ENST00000582539 FLIIQ13045 1269 aa12.44□□□□□ -0.42
TRAPPC8-211ENST00000582539 RNMTO43148 476 aaKnown RBP12.44□□□□□ -0.42
TRAPPC8-211ENST00000582539 NUCB1Q02818 461 aa12.44□□□□□ -0.42
TRAPPC8-211ENST00000582539 TOM1L2Q6ZVM7 507 aa12.44□□□□□ -0.42
TRAPPC8-211ENST00000582539 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC8-211ENST00000582539 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
TRAPPC8-211ENST00000582539 SNRPA1P09661 255 aaKnown RBP12.43□□□□□ -0.42
TRAPPC8-211ENST00000582539 SPATA31A3Q5VYP0 1347 aa12.43□□□□□ -0.42
TRAPPC8-211ENST00000582539 ERVV-2B6SEH9 535 aa12.43□□□□□ -0.42
TRAPPC8-211ENST00000582539 NUTM2GQ5VZR2 741 aa12.43□□□□□ -0.42
TRAPPC8-211ENST00000582539 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
TRAPPC8-211ENST00000582539 MCM10Q7L590 875 aa12.42□□□□□ -0.42
TRAPPC8-211ENST00000582539 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
TRAPPC8-211ENST00000582539 TOM1O60784 492 aa12.42□□□□□ -0.42
TRAPPC8-211ENST00000582539 G3BP1Q13283 466 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAPPC8-211ENST00000582539 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
TRAPPC8-211ENST00000582539 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC8-211ENST00000582539 MFAP1P55081 439 aaKnown RBP12.41□□□□□ -0.42
TRAPPC8-211ENST00000582539 RIC3Q7Z5B4 369 aa12.41□□□□□ -0.42
TRAPPC8-211ENST00000582539 ATP10DQ9P241 1426 aa12.41□□□□□ -0.42
TRAPPC8-211ENST00000582539 GBP4Q96PP9 640 aa12.41□□□□□ -0.42
TRAPPC8-211ENST00000582539 CIZ1Q9ULV3 898 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC8-211ENST00000582539 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
TRAPPC8-211ENST00000582539 RGS12O14924 1447 aa12.41□□□□□ -0.42
TRAPPC8-211ENST00000582539 SLAIN2Q9P270 581 aa12.41□□□□□ -0.42
TRAPPC8-211ENST00000582539 CLASRPQ8N2M8 674 aaKnown RBP12.4□□□□□ -0.42
TRAPPC8-211ENST00000582539 STARD3NLO95772 234 aa12.4□□□□□ -0.42
TRAPPC8-211ENST00000582539 RABEP1Q15276 862 aa12.4□□□□□ -0.42
TRAPPC8-211ENST00000582539 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
TRAPPC8-211ENST00000582539 AEBP1Q8IUX7 1158 aa12.4□□□□□ -0.42
TRAPPC8-211ENST00000582539 DCTPP1Q9H773 170 aa12.4□□□□□ -0.42
TRAPPC8-211ENST00000582539 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC8-211ENST00000582539 IL2RBP14784 551 aa12.39□□□□□ -0.43
TRAPPC8-211ENST00000582539 C20orf194Q5TEA3 1177 aa12.39□□□□□ -0.43
TRAPPC8-211ENST00000582539 CNTROBQ8N137 903 aa12.39□□□□□ -0.43
TRAPPC8-211ENST00000582539 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
TRAPPC8-211ENST00000582539 PHRF1Q9P1Y6 1649 aaKnown RBP12.39□□□□□ -0.43
TRAPPC8-211ENST00000582539 ZBTB7BO15156 539 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-211ENST00000582539 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAPPC8-211ENST00000582539 C8orf58Q8NAV2 365 aa12.39□□□□□ -0.43
TRAPPC8-211ENST00000582539 CARD10Q9BWT7 1032 aa12.39□□□□□ -0.43
TRAPPC8-211ENST00000582539 ERBB3P21860 1342 aa12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 CRB1P82279 1406 aa12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 NCLP19338 710 aaKnown RBP12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 SMARCC1Q92922 1105 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 LINS1Q8NG48 757 aa12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 ANP32BQ92688 251 aaKnown RBP12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 KIF3AQ9Y496 699 aa12.38□□□□□ -0.43
TRAPPC8-211ENST00000582539 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 ATP8B2P98198 1209 aa12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 CSPP1Q1MSJ5 1256 aa12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 RNF20Q5VTR2 975 aa12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 THRAP3Q9Y2W1 955 aaKnown RBP12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 A0A087WZG4 1122 aa12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 SKOR2Q2VWA4 1001 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 ORAI2Q96SN7 254 aa12.37□□□□□ -0.43
TRAPPC8-211ENST00000582539 DDX11L8A8MPP1 907 aa12.36□□□□□ -0.43
TRAPPC8-211ENST00000582539 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
TRAPPC8-211ENST00000582539 CACNA1FO60840 1977 aa12.36□□□□□ -0.43
TRAPPC8-211ENST00000582539 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
TRAPPC8-211ENST00000582539 TMOD3Q9NYL9 352 aa12.36□□□□□ -0.43
TRAPPC8-211ENST00000582539 CEMIPQ8WUJ3 1361 aa12.35□□□□□ -0.43
TRAPPC8-211ENST00000582539 THUMPD2Q9BTF0 503 aaKnown RBP12.35□□□□□ -0.43
TRAPPC8-211ENST00000582539 TTC41PQ6P2S7 1318 aa12.35□□□□□ -0.43
TRAPPC8-211ENST00000582539 GLRX3O76003 335 aaKnown RBP12.35□□□□□ -0.43
TRAPPC8-211ENST00000582539 EIF4A1P60842 406 aaKnown RBP12.35□□□□□ -0.43
TRAPPC8-211ENST00000582539 CHMP5Q9NZZ3 219 aa12.34□□□□□ -0.43
TRAPPC8-211ENST00000582539 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
TRAPPC8-211ENST00000582539 NFAT5O94916 1531 aa12.34□□□□□ -0.43
TRAPPC8-211ENST00000582539 LNPKQ9C0E8 428 aa12.34□□□□□ -0.43
TRAPPC8-211ENST00000582539 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
TRAPPC8-211ENST00000582539 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
TRAPPC8-211ENST00000582539 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
TRAPPC8-211ENST00000582539 NUCB2P80303 420 aa12.33□□□□□ -0.44
TRAPPC8-211ENST00000582539 DIAPH3Q9NSV4 1193 aa12.33□□□□□ -0.44
TRAPPC8-211ENST00000582539 SOS2Q07890 1332 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC8-211ENST00000582539 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
TRAPPC8-211ENST00000582539 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
TRAPPC8-211ENST00000582539 ANAPC15P60006 121 aa12.33□□□□□ -0.44
TRAPPC8-211ENST00000582539 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
TRAPPC8-211ENST00000582539 RGPD1P0DJD0 1748 aa12.33□□□□□ -0.44
TRAPPC8-211ENST00000582539 L1TD1Q5T7N2 865 aaKnown RBP12.32□□□□□ -0.44
TRAPPC8-211ENST00000582539 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
TRAPPC8-211ENST00000582539 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
TRAPPC8-211ENST00000582539 EXOC5O00471 708 aa12.32□□□□□ -0.44
TRAPPC8-211ENST00000582539 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
TRAPPC8-211ENST00000582539 ZNF652Q9Y2D9 606 aa12.32□□□□□ -0.44
TRAPPC8-211ENST00000582539 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
TRAPPC8-211ENST00000582539 PHKG2P15735 406 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms