RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 CD163L1Q9NR16 1453 aa13.21□□□□□ -0.3
GGA3-212ENST00000582376 PCNTO95613 3336 aa13.21□□□□□ -0.3
GGA3-212ENST00000582376 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
GGA3-212ENST00000582376 CTCFP49711 727 aaPredicted RBP13.2□□□□□ -0.3
GGA3-212ENST00000582376 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
GGA3-212ENST00000582376 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
GGA3-212ENST00000582376 TMC1Q8TDI8 760 aa13.2□□□□□ -0.3
GGA3-212ENST00000582376 PIGBQ92521 554 aa13.2□□□□□ -0.3
GGA3-212ENST00000582376 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
GGA3-212ENST00000582376 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
GGA3-212ENST00000582376 MKRN1Q9UHC7 482 aaKnown RBP13.2□□□□□ -0.3
GGA3-212ENST00000582376 PARP3Q9Y6F1 533 aa13.2□□□□□ -0.3
GGA3-212ENST00000582376 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
GGA3-212ENST00000582376 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
GGA3-212ENST00000582376 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
GGA3-212ENST00000582376 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
GGA3-212ENST00000582376 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
GGA3-212ENST00000582376 MLLT1Q03111 559 aaPredicted RBP13.18□□□□□ -0.3
GGA3-212ENST00000582376 ITPK1Q13572 414 aa13.18□□□□□ -0.3
GGA3-212ENST00000582376 ABHD8Q96I13 439 aa13.18□□□□□ -0.3
GGA3-212ENST00000582376 MAP2P11137 1827 aaKnown RBP13.18□□□□□ -0.3
GGA3-212ENST00000582376 ITGB4P16144 1822 aa13.18□□□□□ -0.3
GGA3-212ENST00000582376 SBF1O95248 1867 aa13.17□□□□□ -0.3
GGA3-212ENST00000582376 CYP27B1O15528 508 aa13.17□□□□□ -0.3
GGA3-212ENST00000582376 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
GGA3-212ENST00000582376 COG3Q96JB2 828 aa13.16□□□□□ -0.3
GGA3-212ENST00000582376 TERF2IPQ9NYB0 399 aa13.16□□□□□ -0.3
GGA3-212ENST00000582376 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
GGA3-212ENST00000582376 SMG6Q86US8 1419 aaKnown RBP13.15□□□□□ -0.3
GGA3-212ENST00000582376 GYS1P13807 737 aa13.15□□□□□ -0.3
GGA3-212ENST00000582376 FBLN1P23142 703 aa13.15□□□□□ -0.3
GGA3-212ENST00000582376 RASSF7Q02833 373 aa13.15□□□□□ -0.3
GGA3-212ENST00000582376 SLC12A5Q9H2X9 1139 aa13.15□□□□□ -0.3
GGA3-212ENST00000582376 ADRA2BP18089 450 aa13.14□□□□□ -0.31
GGA3-212ENST00000582376 LBX1P52954 281 aa13.14□□□□□ -0.31
GGA3-212ENST00000582376 ARHGEF1Q92888 912 aaKnown RBP13.14□□□□□ -0.31
GGA3-212ENST00000582376 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
GGA3-212ENST00000582376 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
GGA3-212ENST00000582376 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
GGA3-212ENST00000582376 ROCK2O75116 1388 aaKnown RBP13.13□□□□□ -0.31
GGA3-212ENST00000582376 LMNB1P20700 586 aa13.13□□□□□ -0.31
GGA3-212ENST00000582376 CHRNA5P30532 468 aa13.13□□□□□ -0.31
GGA3-212ENST00000582376 RFC4P35249 363 aa13.13□□□□□ -0.31
GGA3-212ENST00000582376 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
GGA3-212ENST00000582376 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
GGA3-212ENST00000582376 RGS19P49795 217 aa13.12□□□□□ -0.31
GGA3-212ENST00000582376 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
GGA3-212ENST00000582376 CCDC85CA6NKD9 419 aa13.11□□□□□ -0.31
GGA3-212ENST00000582376 POTECB2RU33 542 aa13.11□□□□□ -0.31
GGA3-212ENST00000582376 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
GGA3-212ENST00000582376 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
GGA3-212ENST00000582376 WBP1LQ9NX94 342 aa13.11□□□□□ -0.31
GGA3-212ENST00000582376 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
GGA3-212ENST00000582376 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
GGA3-212ENST00000582376 RPS6KA4O75676 772 aa13.09□□□□□ -0.31
GGA3-212ENST00000582376 VEGFBP49765 207 aa13.09□□□□□ -0.31
GGA3-212ENST00000582376 HSPA8P11142 646 aaKnown RBP13.08□□□□□ -0.32
GGA3-212ENST00000582376 ATG3Q9NT62 314 aa13.08□□□□□ -0.32
GGA3-212ENST00000582376 SPG7Q9UQ90 795 aa13.08□□□□□ -0.32
GGA3-212ENST00000582376 CNTNAP4Q9C0A0 1308 aa13.08□□□□□ -0.32
GGA3-212ENST00000582376 TIAM2Q8IVF5 1701 aa13.08□□□□□ -0.32
GGA3-212ENST00000582376 KDRP35968 1356 aa13.07□□□□□ -0.32
GGA3-212ENST00000582376 DDR1Q08345 913 aa13.07□□□□□ -0.32
GGA3-212ENST00000582376 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
GGA3-212ENST00000582376 INSRP06213 1382 aa13.07□□□□□ -0.32
GGA3-212ENST00000582376 FKBP8Q14318 412 aa13.06□□□□□ -0.32
GGA3-212ENST00000582376 HSP90AB2PQ58FF8 381 aa13.06□□□□□ -0.32
GGA3-212ENST00000582376 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
GGA3-212ENST00000582376 SLC4A9Q96Q91 983 aa13.05□□□□□ -0.32
GGA3-212ENST00000582376 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
GGA3-212ENST00000582376 PASKQ96RG2 1323 aa13.05□□□□□ -0.32
GGA3-212ENST00000582376 TMEM88BA6NKF7 163 aa13.04□□□□□ -0.32
GGA3-212ENST00000582376 POTEIP0CG38 1075 aa13.04□□□□□ -0.32
GGA3-212ENST00000582376 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
GGA3-212ENST00000582376 PUS7Q96PZ0 661 aaKnown RBP13.04□□□□□ -0.32
GGA3-212ENST00000582376 FLT4P35916 1363 aa13.04□□□□□ -0.32
GGA3-212ENST00000582376 NFKBIEO00221 500 aa13.03□□□□□ -0.32
GGA3-212ENST00000582376 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
GGA3-212ENST00000582376 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
GGA3-212ENST00000582376 IFNL2Q8IZJ0 200 aa13.03□□□□□ -0.32
GGA3-212ENST00000582376 TTLL6Q8N841 843 aa13.03□□□□□ -0.32
GGA3-212ENST00000582376 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
GGA3-212ENST00000582376 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
GGA3-212ENST00000582376 ZNF831Q5JPB2 1677 aa13.02□□□□□ -0.32
GGA3-212ENST00000582376 CCDC88AQ3V6T2 1871 aa13.02□□□□□ -0.32
GGA3-212ENST00000582376 PHKG2P15735 406 aa13.02□□□□□ -0.33
GGA3-212ENST00000582376 ERFEQ4G0M1 354 aa13.02□□□□□ -0.33
GGA3-212ENST00000582376 COL5A3P25940 1745 aaPredicted RBP13.02□□□□□ -0.33
GGA3-212ENST00000582376 TM4SF1P30408 202 aa13.01□□□□□ -0.33
GGA3-212ENST00000582376 LDHDQ86WU2 507 aa13.01□□□□□ -0.33
GGA3-212ENST00000582376 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
GGA3-212ENST00000582376 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
GGA3-212ENST00000582376 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.01□□□□□ -0.337e-6■■□□□ 12.8
GGA3-212ENST00000582376 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
GGA3-212ENST00000582376 NCAPD2Q15021 1401 aa13□□□□□ -0.33
GGA3-212ENST00000582376 DEFB115Q30KQ5 88 aa13□□□□□ -0.33
GGA3-212ENST00000582376 WDR33Q9C0J8 1336 aaKnown RBP12.99□□□□□ -0.33
GGA3-212ENST00000582376 IQCA1LA6NCM1 817 aa12.99□□□□□ -0.33
GGA3-212ENST00000582376 RASSF10A6NK89 507 aa12.99□□□□□ -0.33
GGA3-212ENST00000582376 FYB1O15117 783 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms