RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 YY1P25490 414 aa30.28■■■□□ 2.44
CASC3-207ENST00000581849 SSFA2P28290 1259 aa30.28■■■□□ 2.44
CASC3-207ENST00000581849 ATP6V1AP38606 617 aa30.27■■■□□ 2.44
CASC3-207ENST00000581849 LINC00116Q8NCU8 138 aa30.27■■■□□ 2.44
CASC3-207ENST00000581849 DIAPH1O60610 1272 aaKnown RBP30.25■■■□□ 2.43
CASC3-207ENST00000581849 CABP4P57796 275 aa30.25■■■□□ 2.43
CASC3-207ENST00000581849 ITPK1Q13572 414 aa30.25■■■□□ 2.43
CASC3-207ENST00000581849 SCN11AQ9UI33 1791 aa30.23■■■□□ 2.43
CASC3-207ENST00000581849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.23■■■□□ 2.43
CASC3-207ENST00000581849 AKAP4Q5JQC9 854 aa30.22■■■□□ 2.43
CASC3-207ENST00000581849 COL3A1P02461 1466 aaPredicted RBP30.21■■■□□ 2.43
CASC3-207ENST00000581849 AMIGO3Q86WK7 504 aa30.21■■■□□ 2.43
CASC3-207ENST00000581849 COL5A3P25940 1745 aaPredicted RBP30.19■■■□□ 2.42
CASC3-207ENST00000581849 MSL1Q68DK7 614 aa30.19■■■□□ 2.42
CASC3-207ENST00000581849 KLHL34Q8N239 644 aa30.19■■■□□ 2.42
CASC3-207ENST00000581849 GNPATO15228 680 aa30.18■■■□□ 2.42
CASC3-207ENST00000581849 SLC4A9Q96Q91 983 aa30.18■■■□□ 2.42
CASC3-207ENST00000581849 CICQ96RK0 1608 aaPredicted RBP30.18■■■□□ 2.42
CASC3-207ENST00000581849 CHD4Q14839 1912 aa30.18■■■□□ 2.42
CASC3-207ENST00000581849 PHF14O94880 888 aa30.17■■■□□ 2.42
CASC3-207ENST00000581849 RC3H1Q5TC82 1133 aaKnown RBP30.17■■■□□ 2.42
CASC3-207ENST00000581849 CNTNAP4Q9C0A0 1308 aa30.17■■■□□ 2.42
CASC3-207ENST00000581849 HMOX1P09601 288 aa30.16■■■□□ 2.42
CASC3-207ENST00000581849 RBM42Q9BTD8 480 aaKnown RBP30.16■■■□□ 2.42
CASC3-207ENST00000581849 MRC1P22897 1456 aa30.16■■■□□ 2.42
CASC3-207ENST00000581849 NFATC2IPQ8NCF5 419 aa30.15■■■□□ 2.42
CASC3-207ENST00000581849 CD2APQ9Y5K6 639 aa30.15■■■□□ 2.42
CASC3-207ENST00000581849 ADAMTS7Q9UKP4 1686 aa30.14■■■□□ 2.42
CASC3-207ENST00000581849 ADRA2BP18089 450 aa30.13■■■□□ 2.41
CASC3-207ENST00000581849 GPR162Q16538 588 aa30.13■■■□□ 2.41
CASC3-207ENST00000581849 NLGN2Q8NFZ4 835 aa30.13■■■□□ 2.41
CASC3-207ENST00000581849 RTCBQ9Y3I0 505 aaKnown RBP30.13■■■□□ 2.41
CASC3-207ENST00000581849 VIRMAQ69YN4 1812 aaKnown RBP30.11■■■□□ 2.41
CASC3-207ENST00000581849 SLC52A2Q9HAB3 445 aa30.11■■■□□ 2.41
CASC3-207ENST00000581849 MTHFSDQ2M296 383 aaKnown RBP30.1■■■□□ 2.41
CASC3-207ENST00000581849 TRAPPC3LQ5T215 181 aa30.09■■■□□ 2.41
CASC3-207ENST00000581849 SMIM5Q71RC9 77 aa30.09■■■□□ 2.41
CASC3-207ENST00000581849 UTRNP46939 3433 aa30.08■■■□□ 2.41
CASC3-207ENST00000581849 RNMTO43148 476 aaKnown RBP30.08■■■□□ 2.41
CASC3-207ENST00000581849 RPS6KA4O75676 772 aa30.08■■■□□ 2.41
CASC3-207ENST00000581849 CFAP53Q96M91 514 aa30.08■■■□□ 2.41
CASC3-207ENST00000581849 MYH14Q7Z406 1995 aaKnown RBP30.07■■■□□ 2.4
CASC3-207ENST00000581849 PTCD1O75127 700 aaKnown RBP30.07■■■□□ 2.4
CASC3-207ENST00000581849 TJP1Q07157 1748 aa30.07■■■□□ 2.4
CASC3-207ENST00000581849 LGR6Q9HBX8 967 aa30.06■■■□□ 2.4
CASC3-207ENST00000581849 U2SURPO15042 1029 aaKnown RBP30.05■■■□□ 2.4
CASC3-207ENST00000581849 CNGB1Q14028 1251 aaPredicted RBP30.05■■■□□ 2.4
CASC3-207ENST00000581849 NLGN1Q8N2Q7 840 aa30.04■■■□□ 2.4
CASC3-207ENST00000581849 GAS2L2Q8NHY3 880 aa30.04■■■□□ 2.4
CASC3-207ENST00000581849 GRIN3BO60391 1043 aa30.03■■■□□ 2.4
CASC3-207ENST00000581849 ARHGEF1Q92888 912 aaKnown RBP30.02■■■□□ 2.4
CASC3-207ENST00000581849 C4AP0C0L4 1744 aa30.02■■■□□ 2.4
CASC3-207ENST00000581849 CRKLP46109 303 aaKnown RBP30.01■■■□□ 2.39
CASC3-207ENST00000581849 PELP1Q8IZL8 1130 aaKnown RBP30.01■■■□□ 2.39
CASC3-207ENST00000581849 RFC4P35249 363 aa30■■■□□ 2.39
CASC3-207ENST00000581849 NUDCQ9Y266 331 aa30■■■□□ 2.39
CASC3-207ENST00000581849 PPP2R1AP30153 589 aa29.99■■■□□ 2.39
CASC3-207ENST00000581849 KCPQ6ZWJ8 1503 aa29.99■■■□□ 2.39
CASC3-207ENST00000581849 MMP10P09238 476 aa29.98■■■□□ 2.39
CASC3-207ENST00000581849 YBX3P16989 372 aaKnown RBP eCLIP29.97■■■□□ 2.39
CASC3-207ENST00000581849 VSIG10Q8N0Z9 540 aa29.97■■■□□ 2.39
CASC3-207ENST00000581849 ZNF784Q8NCA9 323 aaPredicted RBP29.97■■■□□ 2.39
CASC3-207ENST00000581849 UBR2Q8IWV8 1755 aa29.97■■■□□ 2.39
CASC3-207ENST00000581849 KIF13BQ9NQT8 1826 aa29.96■■■□□ 2.39
CASC3-207ENST00000581849 GOLGB1Q14789 3259 aaKnown RBP29.96■■■□□ 2.39
CASC3-207ENST00000581849 GNAT3A8MTJ3 354 aa29.96■■■□□ 2.39
CASC3-207ENST00000581849 GYS1P13807 737 aa29.96■■■□□ 2.39
CASC3-207ENST00000581849 RSPH6AQ9H0K4 717 aa29.95■■■□□ 2.39
CASC3-207ENST00000581849 INTS5Q6P9B9 1019 aaKnown RBP29.94■■■□□ 2.38
CASC3-207ENST00000581849 DNAJC10Q8IXB1 793 aa29.94■■■□□ 2.38
CASC3-207ENST00000581849 SLC39A6Q13433 755 aa29.93■■■□□ 2.38
CASC3-207ENST00000581849 CCDC87Q9NVE4 849 aa29.93■■■□□ 2.38
CASC3-207ENST00000581849 SIPA1L3O60292 1781 aaPredicted RBP29.92■■■□□ 2.38
CASC3-207ENST00000581849 PRKAR2BP31323 418 aa29.92■■■□□ 2.38
CASC3-207ENST00000581849 USP42Q9H9J4 1324 aaKnown RBP29.92■■■□□ 2.38
CASC3-207ENST00000581849 C10orf71Q711Q0 1435 aa29.91■■■□□ 2.38
CASC3-207ENST00000581849 CYP19A1P11511 503 aaPredicted RBP29.91■■■□□ 2.38
CASC3-207ENST00000581849 TEFQ10587 303 aa29.91■■■□□ 2.38
CASC3-207ENST00000581849 IL17REQ8NFR9 667 aa29.91■■■□□ 2.38
CASC3-207ENST00000581849 CEMIPQ8WUJ3 1361 aa29.9■■■□□ 2.38
CASC3-207ENST00000581849 FCHSD2O94868 740 aa29.89■■■□□ 2.38
CASC3-207ENST00000581849 TTC5Q8N0Z6 440 aa29.89■■■□□ 2.38
CASC3-207ENST00000581849 SOS1Q07889 1333 aaPredicted RBP29.89■■■□□ 2.38
CASC3-207ENST00000581849 TGFB2P61812 414 aa29.88■■■□□ 2.37
CASC3-207ENST00000581849 PARP3Q9Y6F1 533 aa29.88■■■□□ 2.37
CASC3-207ENST00000581849 U2AF1L5P0DN76 240 aaPredicted RBP29.87■■■□□ 2.37
CASC3-207ENST00000581849 U2AF1Q01081 240 aaKnown RBP eCLIP29.87■■■□□ 2.373e-7■■■■■ 27
CASC3-207ENST00000581849 PHACTR3Q96KR7 559 aa29.87■■■□□ 2.37
CASC3-207ENST00000581849 KIAA1551Q9HCM1 1747 aa29.87■■■□□ 2.37
CASC3-207ENST00000581849 PXDNLA1KZ92 1463 aa29.86■■■□□ 2.37
CASC3-207ENST00000581849 ZNF790Q6PG37 636 aa29.85■■■□□ 2.37
CASC3-207ENST00000581849 SRP68Q9UHB9 627 aaKnown RBP29.84■■■□□ 2.37
CASC3-207ENST00000581849 TEX13AQ9BXU3 409 aaPredicted RBP29.83■■■□□ 2.37
CASC3-207ENST00000581849 COL15A1P39059 1388 aa29.82■■■□□ 2.36
CASC3-207ENST00000581849 HEG1Q9ULI3 1381 aa29.82■■■□□ 2.36
CASC3-207ENST00000581849 ZPR1O75312 459 aa29.82■■■□□ 2.36
CASC3-207ENST00000581849 STARD3NLO95772 234 aa29.82■■■□□ 2.36
CASC3-207ENST00000581849 FKBP8Q14318 412 aa29.82■■■□□ 2.36
CASC3-207ENST00000581849 ZBTB1Q9Y2K1 713 aa29.82■■■□□ 2.36
CASC3-207ENST00000581849 ZNF496Q96IT1 587 aaPredicted RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms