RNA–Protein interactions for RNA: ENST00000581767.1

DDX42-214, Transcript of DEAD-box helicase 42, humanhuman

Gene DDX42, Length 2,244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-214ENST00000581767 LINC00116Q8NCU8 138 aa11.59□□□□□ -0.55
DDX42-214ENST00000581767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
DDX42-214ENST00000581767 AEBP1Q8IUX7 1158 aa11.59□□□□□ -0.55
DDX42-214ENST00000581767 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
DDX42-214ENST00000581767 KDRP35968 1356 aa11.58□□□□□ -0.56
DDX42-214ENST00000581767 RBM42Q9BTD8 480 aaKnown RBP11.58□□□□□ -0.56
DDX42-214ENST00000581767 GNPATO15228 680 aa11.58□□□□□ -0.56
DDX42-214ENST00000581767 PER1O15534 1290 aaPredicted RBP11.58□□□□□ -0.56
DDX42-214ENST00000581767 ITPK1Q13572 414 aa11.58□□□□□ -0.56
DDX42-214ENST00000581767 CC2D1BQ5T0F9 858 aaKnown RBP11.58□□□□□ -0.56
DDX42-214ENST00000581767 CD2APQ9Y5K6 639 aa11.58□□□□□ -0.56
DDX42-214ENST00000581767 UBR3Q6ZT12 1888 aa11.57□□□□□ -0.56
DDX42-214ENST00000581767 KDM6AO15550 1401 aaPredicted RBP11.57□□□□□ -0.56
DDX42-214ENST00000581767 ZNF831Q5JPB2 1677 aa11.57□□□□□ -0.56
DDX42-214ENST00000581767 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
DDX42-214ENST00000581767 DIAPH1O60610 1272 aaKnown RBP11.56□□□□□ -0.56
DDX42-214ENST00000581767 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
DDX42-214ENST00000581767 NLGN2Q8NFZ4 835 aa11.56□□□□□ -0.56
DDX42-214ENST00000581767 GRIN3BO60391 1043 aa11.56□□□□□ -0.56
DDX42-214ENST00000581767 RC3H1Q5TC82 1133 aaKnown RBP11.56□□□□□ -0.56
DDX42-214ENST00000581767 RTCBQ9Y3I0 505 aaKnown RBP11.56□□□□□ -0.56
DDX42-214ENST00000581767 TRAPPC3LQ5T215 181 aa11.55□□□□□ -0.56
DDX42-214ENST00000581767 CHD4Q14839 1912 aa11.55□□□□□ -0.56
DDX42-214ENST00000581767 ADRA2BP18089 450 aa11.55□□□□□ -0.56
DDX42-214ENST00000581767 CNTNAP4Q9C0A0 1308 aa11.55□□□□□ -0.56
DDX42-214ENST00000581767 HMOX1P09601 288 aa11.54□□□□□ -0.56
DDX42-214ENST00000581767 AMIGO3Q86WK7 504 aa11.54□□□□□ -0.56
DDX42-214ENST00000581767 NFATC2IPQ8NCF5 419 aa11.54□□□□□ -0.56
DDX42-214ENST00000581767 RPS6KA4O75676 772 aa11.53□□□□□ -0.56
DDX42-214ENST00000581767 SMIM5Q71RC9 77 aa11.53□□□□□ -0.56
DDX42-214ENST00000581767 ZNF784Q8NCA9 323 aaPredicted RBP11.53□□□□□ -0.56
DDX42-214ENST00000581767 PTCD1O75127 700 aaKnown RBP11.52□□□□□ -0.56
DDX42-214ENST00000581767 NLGN1Q8N2Q7 840 aa11.52□□□□□ -0.56
DDX42-214ENST00000581767 SLC4A9Q96Q91 983 aa11.52□□□□□ -0.56
DDX42-214ENST00000581767 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.57
DDX42-214ENST00000581767 RFC4P35249 363 aa11.52□□□□□ -0.57
DDX42-214ENST00000581767 CNGB1Q14028 1251 aaPredicted RBP11.52□□□□□ -0.57
DDX42-214ENST00000581767 CFAP53Q96M91 514 aa11.52□□□□□ -0.57
DDX42-214ENST00000581767 COL5A3P25940 1745 aaPredicted RBP11.52□□□□□ -0.57
DDX42-214ENST00000581767 RNMTO43148 476 aaKnown RBP11.51□□□□□ -0.57
DDX42-214ENST00000581767 SLC52A2Q9HAB3 445 aa11.51□□□□□ -0.57
DDX42-214ENST00000581767 U2SURPO15042 1029 aaKnown RBP11.51□□□□□ -0.57
DDX42-214ENST00000581767 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
DDX42-214ENST00000581767 MMP10P09238 476 aa11.5□□□□□ -0.57
DDX42-214ENST00000581767 YBX3P16989 372 aaKnown RBP eCLIP11.5□□□□□ -0.575e-7■□□□□ 8.5
DDX42-214ENST00000581767 MTHFSDQ2M296 383 aaKnown RBP11.5□□□□□ -0.57
DDX42-214ENST00000581767 CRKLP46109 303 aaKnown RBP11.5□□□□□ -0.57
DDX42-214ENST00000581767 LGR6Q9HBX8 967 aa11.5□□□□□ -0.57
DDX42-214ENST00000581767 CICQ96RK0 1608 aaPredicted RBP11.49□□□□□ -0.57
DDX42-214ENST00000581767 MRC1P22897 1456 aa11.49□□□□□ -0.57
DDX42-214ENST00000581767 GAS2L2Q8NHY3 880 aa11.49□□□□□ -0.57
DDX42-214ENST00000581767 CCDC87Q9NVE4 849 aa11.49□□□□□ -0.57
DDX42-214ENST00000581767 PARP3Q9Y6F1 533 aa11.49□□□□□ -0.57
DDX42-214ENST00000581767 COL3A1P02461 1466 aaPredicted RBP11.49□□□□□ -0.57
DDX42-214ENST00000581767 NUDCQ9Y266 331 aa11.48□□□□□ -0.57
DDX42-214ENST00000581767 TJP1Q07157 1748 aa11.48□□□□□ -0.57
DDX42-214ENST00000581767 GYS1P13807 737 aa11.47□□□□□ -0.57
DDX42-214ENST00000581767 TGFB2P61812 414 aa11.47□□□□□ -0.57
DDX42-214ENST00000581767 ADAMTS7Q9UKP4 1686 aa11.47□□□□□ -0.57
DDX42-214ENST00000581767 DNAJC10Q8IXB1 793 aa11.47□□□□□ -0.57
DDX42-214ENST00000581767 GNAT3A8MTJ3 354 aa11.46□□□□□ -0.57
DDX42-214ENST00000581767 TEFQ10587 303 aa11.46□□□□□ -0.57
DDX42-214ENST00000581767 TTC5Q8N0Z6 440 aa11.46□□□□□ -0.57
DDX42-214ENST00000581767 VSIG10Q8N0Z9 540 aa11.46□□□□□ -0.57
DDX42-214ENST00000581767 C4AP0C0L4 1744 aa11.46□□□□□ -0.58
DDX42-214ENST00000581767 SLC39A6Q13433 755 aa11.45□□□□□ -0.58
DDX42-214ENST00000581767 INTS5Q6P9B9 1019 aaKnown RBP11.45□□□□□ -0.58
DDX42-214ENST00000581767 VIRMAQ69YN4 1812 aaKnown RBP11.45□□□□□ -0.58
DDX42-214ENST00000581767 ZPR1O75312 459 aa11.45□□□□□ -0.58
DDX42-214ENST00000581767 C10orf71Q711Q0 1435 aa11.45□□□□□ -0.58
DDX42-214ENST00000581767 USP42Q9H9J4 1324 aaKnown RBP11.45□□□□□ -0.58
DDX42-214ENST00000581767 CYP19A1P11511 503 aaPredicted RBP11.44□□□□□ -0.58
DDX42-214ENST00000581767 MYH14Q7Z406 1995 aaKnown RBP11.44□□□□□ -0.58
DDX42-214ENST00000581767 KCPQ6ZWJ8 1503 aa11.44□□□□□ -0.58
DDX42-214ENST00000581767 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
DDX42-214ENST00000581767 PPP2R1AP30153 589 aa11.44□□□□□ -0.58
DDX42-214ENST00000581767 SRP68Q9UHB9 627 aaKnown RBP11.44□□□□□ -0.58
DDX42-214ENST00000581767 KIF13BQ9NQT8 1826 aa11.44□□□□□ -0.58
DDX42-214ENST00000581767 SOS1Q07889 1333 aaPredicted RBP11.44□□□□□ -0.58
DDX42-214ENST00000581767 PXDNLA1KZ92 1463 aa11.43□□□□□ -0.58
DDX42-214ENST00000581767 STARD3NLO95772 234 aa11.43□□□□□ -0.58
DDX42-214ENST00000581767 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
DDX42-214ENST00000581767 TEX13AQ9BXU3 409 aaPredicted RBP11.43□□□□□ -0.58
DDX42-214ENST00000581767 U2AF1L5P0DN76 240 aaPredicted RBP11.43□□□□□ -0.58
DDX42-214ENST00000581767 U2AF1Q01081 240 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDX42-214ENST00000581767 RSPH6AQ9H0K4 717 aa11.43□□□□□ -0.58
DDX42-214ENST00000581767 WWC3Q9ULE0 1092 aa11.43□□□□□ -0.58
DDX42-214ENST00000581767 C1QTNF8P60827 252 aa11.42□□□□□ -0.58
DDX42-214ENST00000581767 FKBP8Q14318 412 aa11.42□□□□□ -0.58
DDX42-214ENST00000581767 IL17REQ8NFR9 667 aa11.42□□□□□ -0.58
DDX42-214ENST00000581767 A0A087WZG4 1122 aa11.41□□□□□ -0.58
DDX42-214ENST00000581767 A0A0G2JLW4 131 aa11.41□□□□□ -0.58
DDX42-214ENST00000581767 USPL1Q5W0Q7 1092 aa11.41□□□□□ -0.58
DDX42-214ENST00000581767 NARFQ9UHQ1 456 aa11.41□□□□□ -0.58
DDX42-214ENST00000581767 BCS1LQ9Y276 419 aa11.41□□□□□ -0.58
DDX42-214ENST00000581767 COL15A1P39059 1388 aa11.41□□□□□ -0.58
DDX42-214ENST00000581767 ATP10DQ9P241 1426 aa11.41□□□□□ -0.58
DDX42-214ENST00000581767 UBR2Q8IWV8 1755 aa11.41□□□□□ -0.58
DDX42-214ENST00000581767 FCHSD2O94868 740 aa11.41□□□□□ -0.58
DDX42-214ENST00000581767 NEFMP07197 916 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms