RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 AKAP4Q5JQC9 854 aa10.35□□□□□ -0.75
KPNB1-210ENST00000580573 NLRP2Q9NX02 1062 aa10.35□□□□□ -0.75
KPNB1-210ENST00000580573 TAOK2Q9UL54 1235 aa10.35□□□□□ -0.75
KPNB1-210ENST00000580573 SPATA31A6Q5VVP1 1343 aa10.34□□□□□ -0.75
KPNB1-210ENST00000580573 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
KPNB1-210ENST00000580573 BRPF1P55201 1214 aaPredicted RBP10.34□□□□□ -0.75
KPNB1-210ENST00000580573 DCTN1Q14203 1278 aa10.34□□□□□ -0.75
KPNB1-210ENST00000580573 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
KPNB1-210ENST00000580573 MCM10Q7L590 875 aa10.34□□□□□ -0.75
KPNB1-210ENST00000580573 IL17REQ8NFR9 667 aa10.34□□□□□ -0.75
KPNB1-210ENST00000580573 TSR2Q969E8 191 aaKnown RBP10.34□□□□□ -0.75
KPNB1-210ENST00000580573 MBIPQ9NS73 344 aa10.34□□□□□ -0.75
KPNB1-210ENST00000580573 ITGB4P16144 1822 aa10.34□□□□□ -0.75
KPNB1-210ENST00000580573 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
KPNB1-210ENST00000580573 RARSP54136 660 aaKnown RBP10.33□□□□□ -0.76
KPNB1-210ENST00000580573 EXOSC9Q06265 439 aaKnown RBP10.33□□□□□ -0.76
KPNB1-210ENST00000580573 RAPGEF4Q8WZA2 1011 aa10.33□□□□□ -0.76
KPNB1-210ENST00000580573 BTG4Q9NY30 223 aa10.33□□□□□ -0.76
KPNB1-210ENST00000580573 THSD7AQ9UPZ6 1657 aa10.33□□□□□ -0.76
KPNB1-210ENST00000580573 LAMB4A4D0S4 1761 aa10.33□□□□□ -0.76
KPNB1-210ENST00000580573 BCL9LQ86UU0 1499 aa10.32□□□□□ -0.76
KPNB1-210ENST00000580573 CSB-PGBD3P0DP91 1061 aa10.32□□□□□ -0.76
KPNB1-210ENST00000580573 TATP17735 454 aaPredicted RBP10.32□□□□□ -0.76
KPNB1-210ENST00000580573 ZNF530Q6P9A1 599 aaPredicted RBP10.32□□□□□ -0.76
KPNB1-210ENST00000580573 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
KPNB1-210ENST00000580573 RTF1Q92541 710 aaKnown RBP10.32□□□□□ -0.76
KPNB1-210ENST00000580573 RNF25Q96BH1 459 aaPredicted RBP10.32□□□□□ -0.76
KPNB1-210ENST00000580573 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
KPNB1-210ENST00000580573 SOS1Q07889 1333 aaPredicted RBP10.32□□□□□ -0.76
KPNB1-210ENST00000580573 C5P01031 1676 aa10.31□□□□□ -0.76
KPNB1-210ENST00000580573 HEG1Q9ULI3 1381 aa10.31□□□□□ -0.76
KPNB1-210ENST00000580573 RIOK3O14730 519 aaKnown RBP10.31□□□□□ -0.76
KPNB1-210ENST00000580573 NEFLP07196 543 aa10.31□□□□□ -0.76
KPNB1-210ENST00000580573 PHKG2P15735 406 aa10.31□□□□□ -0.76
KPNB1-210ENST00000580573 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.764e-8■■■□□ 16.4
KPNB1-210ENST00000580573 ALDH1L2Q3SY69 923 aa10.31□□□□□ -0.76
KPNB1-210ENST00000580573 TOM1L2Q6ZVM7 507 aa10.31□□□□□ -0.76
KPNB1-210ENST00000580573 SPG7Q9UQ90 795 aa10.31□□□□□ -0.76
KPNB1-210ENST00000580573 TNS2Q63HR2 1409 aa10.31□□□□□ -0.76
KPNB1-210ENST00000580573 CICQ96RK0 1608 aaPredicted RBP10.3□□□□□ -0.76
KPNB1-210ENST00000580573 CYP27B1O15528 508 aa10.3□□□□□ -0.76
KPNB1-210ENST00000580573 RNMTO43148 476 aaKnown RBP10.3□□□□□ -0.76
KPNB1-210ENST00000580573 VAMP4O75379 141 aa10.3□□□□□ -0.76
KPNB1-210ENST00000580573 PRKAR2AP13861 404 aaKnown RBP10.3□□□□□ -0.76
KPNB1-210ENST00000580573 IL2RBP14784 551 aa10.3□□□□□ -0.76
KPNB1-210ENST00000580573 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
KPNB1-210ENST00000580573 SPATA31A1Q5TZJ5 1347 aa10.3□□□□□ -0.76
KPNB1-210ENST00000580573 PCDH11XQ9BZA7 1347 aa10.3□□□□□ -0.76
KPNB1-210ENST00000580573 PCDH11YQ9BZA8 1340 aa10.3□□□□□ -0.76
KPNB1-210ENST00000580573 DOT1LQ8TEK3 1739 aa10.3□□□□□ -0.76
KPNB1-210ENST00000580573 BCAR3O75815 825 aa10.29□□□□□ -0.76
KPNB1-210ENST00000580573 TAF7Q15545 349 aaPredicted RBP10.29□□□□□ -0.76
KPNB1-210ENST00000580573 C1orf141Q5JVX7 400 aa10.29□□□□□ -0.76
KPNB1-210ENST00000580573 IFNL2Q8IZJ0 200 aa10.29□□□□□ -0.76
KPNB1-210ENST00000580573 HS6ST3Q8IZP7 471 aa10.29□□□□□ -0.76
KPNB1-210ENST00000580573 FNBP4Q8N3X1 1017 aaPredicted RBP10.29□□□□□ -0.76
KPNB1-210ENST00000580573 LGR6Q9HBX8 967 aa10.29□□□□□ -0.76
KPNB1-210ENST00000580573 THRAP3Q9Y2W1 955 aaKnown RBP10.29□□□□□ -0.76
KPNB1-210ENST00000580573 HSPA1LP34931 641 aa10.28□□□□□ -0.76
KPNB1-210ENST00000580573 PDE3AQ14432 1141 aa10.28□□□□□ -0.76
KPNB1-210ENST00000580573 CHRDL2Q6WN34 429 aa10.28□□□□□ -0.76
KPNB1-210ENST00000580573 TSPYL6Q8N831 410 aa10.28□□□□□ -0.76
KPNB1-210ENST00000580573 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.28□□□□□ -0.76
KPNB1-210ENST00000580573 C8orf58Q8NAV2 365 aa10.28□□□□□ -0.76
KPNB1-210ENST00000580573 DCAF5Q96JK2 942 aa10.28□□□□□ -0.76
KPNB1-210ENST00000580573 SPATA31A5Q5VU36 1347 aa10.28□□□□□ -0.76
KPNB1-210ENST00000580573 SPATA31A7Q8IWB4 1347 aa10.28□□□□□ -0.76
KPNB1-210ENST00000580573 HSP90AB1P08238 724 aaKnown RBP10.27□□□□□ -0.77
KPNB1-210ENST00000580573 HOXB7P09629 217 aa10.27□□□□□ -0.77
KPNB1-210ENST00000580573 EVA1CP58658 441 aa10.27□□□□□ -0.77
KPNB1-210ENST00000580573 TWISTNBQ3B726 338 aaPredicted RBP10.27□□□□□ -0.77
KPNB1-210ENST00000580573 MPRIPQ6WCQ1 1025 aa10.27□□□□□ -0.77
KPNB1-210ENST00000580573 BARGINQ6ZT62 677 aa10.27□□□□□ -0.77
KPNB1-210ENST00000580573 ZCRB1Q8TBF4 217 aaKnown RBP10.27□□□□□ -0.77
KPNB1-210ENST00000580573 SSH1Q8WYL5 1049 aa10.27□□□□□ -0.77
KPNB1-210ENST00000580573 CDCA7Q9BWT1 371 aaPredicted RBP10.27□□□□□ -0.77
KPNB1-210ENST00000580573 STRN4Q9NRL3 753 aa10.27□□□□□ -0.77
KPNB1-210ENST00000580573 KCPQ6ZWJ8 1503 aa10.27□□□□□ -0.77
KPNB1-210ENST00000580573 ZNF831Q5JPB2 1677 aa10.26□□□□□ -0.77
KPNB1-210ENST00000580573 ADAMTS2O95450 1211 aa10.26□□□□□ -0.77
KPNB1-210ENST00000580573 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
KPNB1-210ENST00000580573 SLC52A2Q9HAB3 445 aa10.26□□□□□ -0.77
KPNB1-210ENST00000580573 TSPYL4Q9UJ04 414 aa10.26□□□□□ -0.77
KPNB1-210ENST00000580573 KIF16BQ96L93 1317 aa10.26□□□□□ -0.77
KPNB1-210ENST00000580573 RGS12O14924 1447 aa10.25□□□□□ -0.77
KPNB1-210ENST00000580573 VPS72Q15906 364 aa10.25□□□□□ -0.77
KPNB1-210ENST00000580573 UNC5CLQ8IV45 518 aa10.25□□□□□ -0.77
KPNB1-210ENST00000580573 ARHGAP45Q92619 1136 aa10.25□□□□□ -0.77
KPNB1-210ENST00000580573 LAS1LQ9Y4W2 734 aaKnown RBP10.25□□□□□ -0.77
KPNB1-210ENST00000580573 ATRNO75882 1429 aa10.24□□□□□ -0.77
KPNB1-210ENST00000580573 SBF2Q86WG5 1849 aa10.24□□□□□ -0.77
KPNB1-210ENST00000580573 ERVV-2B6SEH9 535 aa10.24□□□□□ -0.77
KPNB1-210ENST00000580573 PLIN1O60240 522 aa10.24□□□□□ -0.77
KPNB1-210ENST00000580573 PYGBP11216 843 aa10.24□□□□□ -0.77
KPNB1-210ENST00000580573 EIF4A1P60842 406 aaKnown RBP10.24□□□□□ -0.77
KPNB1-210ENST00000580573 IRX6P78412 446 aaPredicted RBP10.24□□□□□ -0.77
KPNB1-210ENST00000580573 TEFQ10587 303 aa10.24□□□□□ -0.77
KPNB1-210ENST00000580573 KRT24Q2M2I5 525 aa10.24□□□□□ -0.77
KPNB1-210ENST00000580573 C20orf194Q5TEA3 1177 aa10.24□□□□□ -0.77
KPNB1-210ENST00000580573 MRPL50Q8N5N7 158 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms