RNA–Protein interactions for RNA: ENST00000580387.5

RPL17-209, Transcript of ribosomal protein L17, humanhuman

TSL 5

Gene RPL17, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-209ENST00000580387 ATG3Q9NT62 314 aa23.17■■□□□ 1.3
RPL17-209ENST00000580387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.16■■□□□ 1.3
RPL17-209ENST00000580387 GNPATO15228 680 aa23.15■■□□□ 1.3
RPL17-209ENST00000580387 SSFA2P28290 1259 aa23.15■■□□□ 1.3
RPL17-209ENST00000580387 IL13P35225 146 aa23.15■■□□□ 1.3
RPL17-209ENST00000580387 CABP4P57796 275 aa23.15■■□□□ 1.3
RPL17-209ENST00000580387 ITPK1Q13572 414 aa23.15■■□□□ 1.3
RPL17-209ENST00000580387 CC2D1BQ5T0F9 858 aaKnown RBP23.15■■□□□ 1.3
RPL17-209ENST00000580387 RBM42Q9BTD8 480 aaKnown RBP23.15■■□□□ 1.3
RPL17-209ENST00000580387 KDM6AO15550 1401 aaPredicted RBP23.15■■□□□ 1.3
RPL17-209ENST00000580387 MTHFSP49914 203 aa23.14■■□□□ 1.29
RPL17-209ENST00000580387 AMIGO3Q86WK7 504 aa23.14■■□□□ 1.29
RPL17-209ENST00000580387 KDRP35968 1356 aa23.14■■□□□ 1.29
RPL17-209ENST00000580387 SMIM5Q71RC9 77 aa23.13■■□□□ 1.29
RPL17-209ENST00000580387 CHD4Q14839 1912 aa23.13■■□□□ 1.29
RPL17-209ENST00000580387 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
RPL17-209ENST00000580387 PER1O15534 1290 aaPredicted RBP23.1■■□□□ 1.29
RPL17-209ENST00000580387 HMOX1P09601 288 aa23.08■■□□□ 1.29
RPL17-209ENST00000580387 CD2APQ9Y5K6 639 aa23.08■■□□□ 1.29
RPL17-209ENST00000580387 ZNF831Q5JPB2 1677 aa23.08■■□□□ 1.29
RPL17-209ENST00000580387 ZNF784Q8NCA9 323 aaPredicted RBP23.07■■□□□ 1.28
RPL17-209ENST00000580387 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
RPL17-209ENST00000580387 DIAPH1O60610 1272 aaKnown RBP23.06■■□□□ 1.28
RPL17-209ENST00000580387 COL5A3P25940 1745 aaPredicted RBP23.05■■□□□ 1.28
RPL17-209ENST00000580387 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
RPL17-209ENST00000580387 AKAP4Q5JQC9 854 aa23.05■■□□□ 1.28
RPL17-209ENST00000580387 NFATC2IPQ8NCF5 419 aa23.05■■□□□ 1.28
RPL17-209ENST00000580387 SLC4A9Q96Q91 983 aa23.05■■□□□ 1.28
RPL17-209ENST00000580387 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
RPL17-209ENST00000580387 GRIN3BO60391 1043 aa23.04■■□□□ 1.28
RPL17-209ENST00000580387 TRAPPC3LQ5T215 181 aa23.04■■□□□ 1.28
RPL17-209ENST00000580387 UTRNP46939 3433 aa23.04■■□□□ 1.28
RPL17-209ENST00000580387 NPC1L1Q9UHC9 1359 aa23.03■■□□□ 1.28
RPL17-209ENST00000580387 YBX3P16989 372 aaKnown RBP eCLIP23.03■■□□□ 1.284e-42■□□□□ 8.9
RPL17-209ENST00000580387 CNTNAP4Q9C0A0 1308 aa23.03■■□□□ 1.28
RPL17-209ENST00000580387 RC3H1Q5TC82 1133 aaKnown RBP23.02■■□□□ 1.28
RPL17-209ENST00000580387 ADRA2BP18089 450 aa23■■□□□ 1.27
RPL17-209ENST00000580387 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
RPL17-209ENST00000580387 MMP10P09238 476 aa22.99■■□□□ 1.27
RPL17-209ENST00000580387 RFC4P35249 363 aa22.99■■□□□ 1.27
RPL17-209ENST00000580387 SLC52A2Q9HAB3 445 aa22.99■■□□□ 1.27
RPL17-209ENST00000580387 RPS6KA4O75676 772 aa22.98■■□□□ 1.27
RPL17-209ENST00000580387 ARHGEF1Q92888 912 aaKnown RBP22.98■■□□□ 1.27
RPL17-209ENST00000580387 COL3A1P02461 1466 aaPredicted RBP22.98■■□□□ 1.27
RPL17-209ENST00000580387 TJP1Q07157 1748 aa22.97■■□□□ 1.27
RPL17-209ENST00000580387 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
RPL17-209ENST00000580387 MTHFSDQ2M296 383 aaKnown RBP22.97■■□□□ 1.27
RPL17-209ENST00000580387 NLGN1Q8N2Q7 840 aa22.97■■□□□ 1.27
RPL17-209ENST00000580387 LGR6Q9HBX8 967 aa22.97■■□□□ 1.27
RPL17-209ENST00000580387 MRC1P22897 1456 aa22.97■■□□□ 1.27
RPL17-209ENST00000580387 CRKLP46109 303 aaKnown RBP22.96■■□□□ 1.27
RPL17-209ENST00000580387 WWC3Q9ULE0 1092 aa22.96■■□□□ 1.27
RPL17-209ENST00000580387 CICQ96RK0 1608 aaPredicted RBP22.96■■□□□ 1.27
RPL17-209ENST00000580387 C4AP0C0L4 1744 aa22.96■■□□□ 1.27
RPL17-209ENST00000580387 VIRMAQ69YN4 1812 aaKnown RBP22.96■■□□□ 1.27
RPL17-209ENST00000580387 MYH14Q7Z406 1995 aaKnown RBP22.94■■□□□ 1.26
RPL17-209ENST00000580387 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
RPL17-209ENST00000580387 GYS1P13807 737 aa22.92■■□□□ 1.26
RPL17-209ENST00000580387 SLC39A6Q13433 755 aa22.92■■□□□ 1.26
RPL17-209ENST00000580387 ADAMTS7Q9UKP4 1686 aa22.91■■□□□ 1.26
RPL17-209ENST00000580387 GOLGB1Q14789 3259 aaKnown RBP22.91■■□□□ 1.26
RPL17-209ENST00000580387 DNAJC10Q8IXB1 793 aa22.91■■□□□ 1.26
RPL17-209ENST00000580387 PARP3Q9Y6F1 533 aa22.91■■□□□ 1.26
RPL17-209ENST00000580387 GAS2L2Q8NHY3 880 aa22.9■■□□□ 1.26
RPL17-209ENST00000580387 CCDC87Q9NVE4 849 aa22.9■■□□□ 1.26
RPL17-209ENST00000580387 SRP68Q9UHB9 627 aaKnown RBP22.89■■□□□ 1.25
RPL17-209ENST00000580387 C10orf71Q711Q0 1435 aa22.89■■□□□ 1.25
RPL17-209ENST00000580387 KCPQ6ZWJ8 1503 aa22.88■■□□□ 1.25
RPL17-209ENST00000580387 USP42Q9H9J4 1324 aaKnown RBP22.88■■□□□ 1.25
RPL17-209ENST00000580387 KIF13BQ9NQT8 1826 aa22.88■■□□□ 1.25
RPL17-209ENST00000580387 TTC5Q8N0Z6 440 aa22.88■■□□□ 1.25
RPL17-209ENST00000580387 PXDNLA1KZ92 1463 aa22.87■■□□□ 1.25
RPL17-209ENST00000580387 TEFQ10587 303 aa22.87■■□□□ 1.25
RPL17-209ENST00000580387 INTS5Q6P9B9 1019 aaKnown RBP22.87■■□□□ 1.25
RPL17-209ENST00000580387 GNAT3A8MTJ3 354 aa22.86■■□□□ 1.25
RPL17-209ENST00000580387 GIGYF1O75420 1035 aaPredicted RBP22.86■■□□□ 1.25
RPL17-209ENST00000580387 TGFB2P61812 414 aa22.86■■□□□ 1.25
RPL17-209ENST00000580387 NUDCQ9Y266 331 aa22.86■■□□□ 1.25
RPL17-209ENST00000580387 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
RPL17-209ENST00000580387 ZPR1O75312 459 aa22.85■■□□□ 1.25
RPL17-209ENST00000580387 CYP19A1P11511 503 aaPredicted RBP22.84■■□□□ 1.25
RPL17-209ENST00000580387 PRKAR2BP31323 418 aa22.84■■□□□ 1.25
RPL17-209ENST00000580387 KIAA1551Q9HCM1 1747 aa22.84■■□□□ 1.25
RPL17-209ENST00000580387 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
RPL17-209ENST00000580387 SOS1Q07889 1333 aaPredicted RBP22.83■■□□□ 1.25
RPL17-209ENST00000580387 ATP10DQ9P241 1426 aa22.83■■□□□ 1.25
RPL17-209ENST00000580387 A0A0G2JLW4 131 aa22.83■■□□□ 1.25
RPL17-209ENST00000580387 PPP2R1AP30153 589 aa22.83■■□□□ 1.25
RPL17-209ENST00000580387 FKBP8Q14318 412 aa22.83■■□□□ 1.25
RPL17-209ENST00000580387 VSIG10Q8N0Z9 540 aa22.83■■□□□ 1.25
RPL17-209ENST00000580387 COL15A1P39059 1388 aa22.82■■□□□ 1.24
RPL17-209ENST00000580387 C1QTNF8P60827 252 aa22.82■■□□□ 1.24
RPL17-209ENST00000580387 BCS1LQ9Y276 419 aa22.82■■□□□ 1.24
RPL17-209ENST00000580387 ZBTB1Q9Y2K1 713 aa22.82■■□□□ 1.24
RPL17-209ENST00000580387 U2AF1L5P0DN76 240 aaPredicted RBP22.81■■□□□ 1.24
RPL17-209ENST00000580387 U2AF1Q01081 240 aaKnown RBP eCLIP22.81■■□□□ 1.24
RPL17-209ENST00000580387 USPL1Q5W0Q7 1092 aa22.81■■□□□ 1.24
RPL17-209ENST00000580387 IL17REQ8NFR9 667 aa22.81■■□□□ 1.24
RPL17-209ENST00000580387 RSPH6AQ9H0K4 717 aa22.81■■□□□ 1.24
RPL17-209ENST00000580387 STARD3NLO95772 234 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms