RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 PTPRTO14522 1441 aa10.89□□□□□ -0.67
PPP4R1-216ENST00000580283 ATP10AO60312 1499 aa10.88□□□□□ -0.67
PPP4R1-216ENST00000580283 INTS6LQ5JSJ4 861 aaKnown RBP10.88□□□□□ -0.67
PPP4R1-216ENST00000580283 ZNF787Q6DD87 383 aa10.88□□□□□ -0.67
PPP4R1-216ENST00000580283 ATP13A2Q9NQ11 1180 aa10.88□□□□□ -0.67
PPP4R1-216ENST00000580283 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
PPP4R1-216ENST00000580283 C3P01024 1663 aa10.88□□□□□ -0.67
PPP4R1-216ENST00000580283 SCAPERQ9BY12 1400 aa10.87□□□□□ -0.67
PPP4R1-216ENST00000580283 PLEKHD1A6NEE1 506 aa10.87□□□□□ -0.67
PPP4R1-216ENST00000580283 PPP1R26Q5T8A7 1209 aaPredicted RBP10.87□□□□□ -0.67
PPP4R1-216ENST00000580283 WWC1Q8IX03 1113 aa10.87□□□□□ -0.67
PPP4R1-216ENST00000580283 ITPKCQ96DU7 683 aa10.87□□□□□ -0.67
PPP4R1-216ENST00000580283 KLF16Q9BXK1 252 aaPredicted RBP10.87□□□□□ -0.67
PPP4R1-216ENST00000580283 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
PPP4R1-216ENST00000580283 COG6Q9Y2V7 657 aa10.86□□□□□ -0.67
PPP4R1-216ENST00000580283 EIF4G2P78344 907 aaKnown RBP eCLIP10.85□□□□□ -0.67
PPP4R1-216ENST00000580283 IRF5Q13568 498 aa10.85□□□□□ -0.67
PPP4R1-216ENST00000580283 WASHC4Q2M389 1173 aa10.85□□□□□ -0.67
PPP4R1-216ENST00000580283 UHRF1BP1Q6BDS2 1440 aa10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 BMP1P13497 986 aa10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 SEPT12Q8IYM1 358 aa10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 SENP2Q9HC62 589 aa10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 GMPR2Q9P2T1 348 aaKnown RBP10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 IQSEC2Q5JU85 1478 aa10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 PLCH2O75038 1416 aa10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 C9orf84Q5VXU9 1444 aa10.84□□□□□ -0.67
PPP4R1-216ENST00000580283 ESPNB1AK53 854 aa10.83□□□□□ -0.68
PPP4R1-216ENST00000580283 VAC14Q08AM6 782 aa10.83□□□□□ -0.68
PPP4R1-216ENST00000580283 RNF20Q5VTR2 975 aa10.83□□□□□ -0.68
PPP4R1-216ENST00000580283 GIGYF1O75420 1035 aaPredicted RBP10.82□□□□□ -0.68
PPP4R1-216ENST00000580283 SCARF1Q14162 830 aa10.82□□□□□ -0.68
PPP4R1-216ENST00000580283 MRPL14Q6P1L8 145 aaKnown RBP10.82□□□□□ -0.68
PPP4R1-216ENST00000580283 POM121Q96HA1 1249 aa10.82□□□□□ -0.68
PPP4R1-216ENST00000580283 C11orf95C9JLR9 678 aaPredicted RBP10.81□□□□□ -0.68
PPP4R1-216ENST00000580283 UPP2O95045 317 aa10.81□□□□□ -0.68
PPP4R1-216ENST00000580283 TRIM46Q7Z4K8 759 aa10.81□□□□□ -0.68
PPP4R1-216ENST00000580283 CDK13Q14004 1512 aaKnown RBP10.8□□□□□ -0.68
PPP4R1-216ENST00000580283 POTECB2RU33 542 aa10.8□□□□□ -0.68
PPP4R1-216ENST00000580283 ERVH48-1M5A8F1 160 aa10.8□□□□□ -0.68
PPP4R1-216ENST00000580283 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
PPP4R1-216ENST00000580283 KIFC2Q96AC6 838 aa10.8□□□□□ -0.68
PPP4R1-216ENST00000580283 TMPRSS4Q9NRS4 437 aa10.8□□□□□ -0.68
PPP4R1-216ENST00000580283 NCOA1Q15788 1441 aa10.8□□□□□ -0.68
PPP4R1-216ENST00000580283 MYO5CQ9NQX4 1742 aa10.8□□□□□ -0.68
PPP4R1-216ENST00000580283 DIP2CQ9Y2E4 1556 aa10.79□□□□□ -0.68
PPP4R1-216ENST00000580283 RANGAP1P46060 587 aaPredicted RBP10.79□□□□□ -0.68
PPP4R1-216ENST00000580283 AFAP1Q8N556 730 aa10.79□□□□□ -0.68
PPP4R1-216ENST00000580283 MEIOBQ8N635 442 aa10.79□□□□□ -0.68
PPP4R1-216ENST00000580283 KDM5CP41229 1560 aa10.78□□□□□ -0.68
PPP4R1-216ENST00000580283 ABCA6Q8N139 1617 aa10.78□□□□□ -0.68
PPP4R1-216ENST00000580283 ZNF335Q9H4Z2 1342 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-216ENST00000580283 TRAPPC8Q9Y2L5 1435 aa10.77□□□□□ -0.68
PPP4R1-216ENST00000580283 CBLBQ13191 982 aa10.77□□□□□ -0.69
PPP4R1-216ENST00000580283 SEMA3FQ13275 785 aa10.77□□□□□ -0.69
PPP4R1-216ENST00000580283 C6orf118Q5T5N4 469 aa10.77□□□□□ -0.69
PPP4R1-216ENST00000580283 ZNF784Q8NCA9 323 aaPredicted RBP10.77□□□□□ -0.69
PPP4R1-216ENST00000580283 TRIM47Q96LD4 638 aa10.77□□□□□ -0.69
PPP4R1-216ENST00000580283 PURBQ96QR8 312 aaKnown RBP10.77□□□□□ -0.69
PPP4R1-216ENST00000580283 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.69
PPP4R1-216ENST00000580283 REREQ9P2R6 1566 aa10.77□□□□□ -0.69
PPP4R1-216ENST00000580283 CAMSAP1Q5T5Y3 1602 aa10.76□□□□□ -0.69
PPP4R1-216ENST00000580283 CDC42BPBQ9Y5S2 1711 aa10.76□□□□□ -0.69
PPP4R1-216ENST00000580283 UBAP1LF5GYI3 381 aa10.76□□□□□ -0.69
PPP4R1-216ENST00000580283 BMP2P12643 396 aa10.76□□□□□ -0.69
PPP4R1-216ENST00000580283 SOX11P35716 441 aa10.76□□□□□ -0.69
PPP4R1-216ENST00000580283 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
PPP4R1-216ENST00000580283 ZFP42Q96MM3 310 aa10.76□□□□□ -0.69
PPP4R1-216ENST00000580283 TSEN34Q9BSV6 310 aaKnown RBP10.76□□□□□ -0.69
PPP4R1-216ENST00000580283 MED1Q15648 1581 aaPredicted RBP10.76□□□□□ -0.69
PPP4R1-216ENST00000580283 EFCAB2Q5VUJ9 269 aa10.75□□□□□ -0.69
PPP4R1-216ENST00000580283 CYLDQ9NQC7 956 aa10.75□□□□□ -0.69
PPP4R1-216ENST00000580283 PCDHB11Q9Y5F2 797 aa10.75□□□□□ -0.69
PPP4R1-216ENST00000580283 KIF14Q15058 1648 aa10.75□□□□□ -0.69
PPP4R1-216ENST00000580283 ZNF518AQ6AHZ1 1483 aa10.74□□□□□ -0.69
PPP4R1-216ENST00000580283 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
PPP4R1-216ENST00000580283 Q6ZVU0 165 aa10.74□□□□□ -0.69
PPP4R1-216ENST00000580283 ESF1Q9H501 851 aaKnown RBP10.74□□□□□ -0.69
PPP4R1-216ENST00000580283 KIDINS220Q9ULH0 1771 aa10.73□□□□□ -0.69
PPP4R1-216ENST00000580283 HSPA1LP34931 641 aa10.73□□□□□ -0.69
PPP4R1-216ENST00000580283 CLUAP1Q96AJ1 413 aa10.73□□□□□ -0.69
PPP4R1-216ENST00000580283 AGLP35573 1532 aa10.73□□□□□ -0.69
PPP4R1-216ENST00000580283 SUPT6HQ7KZ85 1726 aaKnown RBP10.72□□□□□ -0.69
PPP4R1-216ENST00000580283 LRRIQ1Q96JM4 1722 aa10.72□□□□□ -0.69
PPP4R1-216ENST00000580283 SNRPBP14678 240 aaKnown RBP10.72□□□□□ -0.69
PPP4R1-216ENST00000580283 LILRA1O75019 489 aa10.71□□□□□ -0.69
PPP4R1-216ENST00000580283 RELBQ01201 579 aa10.71□□□□□ -0.69
PPP4R1-216ENST00000580283 RNF135Q8IUD6 432 aa10.71□□□□□ -0.69
PPP4R1-216ENST00000580283 MLH3Q9UHC1 1453 aa10.71□□□□□ -0.69
PPP4R1-216ENST00000580283 MROH2AA6NES4 1674 aa10.7□□□□□ -0.7
PPP4R1-216ENST00000580283 ADH1AP07327 375 aa10.7□□□□□ -0.7
PPP4R1-216ENST00000580283 CC2D2BQ6DHV5 1058 aa10.7□□□□□ -0.7
PPP4R1-216ENST00000580283 AGBL1Q96MI9 1066 aa10.7□□□□□ -0.7
PPP4R1-216ENST00000580283 PROSER2Q86WR7 435 aaPredicted RBP10.69□□□□□ -0.7
PPP4R1-216ENST00000580283 ZNF142P52746 1687 aaPredicted RBP10.69□□□□□ -0.7
PPP4R1-216ENST00000580283 ALKQ9UM73 1620 aa10.69□□□□□ -0.7
PPP4R1-216ENST00000580283 TCOF1Q13428 1488 aaKnown RBP10.68□□□□□ -0.7
PPP4R1-216ENST00000580283 ADD1P35611 737 aaKnown RBP10.68□□□□□ -0.7
PPP4R1-216ENST00000580283 ERVK-9P63128 1117 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms